ID   HM346937; SV 1; linear; genomic RNA; STD; VRL; 1675 BP.
XX
AC   HM346937;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Denyenye1-2 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1675
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1675
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; 832d957837218714e1dec2cd1fbd4629.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1675
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Denyenye1-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Kenya:Denyenye"
FT                   /collection_date="Oct-2008"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1476
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZC5"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZC5"
FT                   /protein_id="ADW23649.1"
FT                   /translation="GPYIKWFLKELGLEGVVKMLSAFGDKSAYALCTFAYVHNELSDPV
FT                   VFKGVVNGEIVPPRGNNGFGWDPIFKPDECSCTFAEMPSSMKNDFSHRRRALEKVKLFL
FT                   DNLVVKQKEKKARVALTIDVQALNQEEIEAEITALKKLWKDNGPTRTRSPFEARRLRAP
FT                   QVERVNELLQKLKDEGLQTKKRPCGEPDDGEVVDDDSDGDNQRSGKEVIDESQNNQQVD
FT                   PRKPKFKIRGDGSAIRRDDIDKIPTNALEIKKTFKPPKVSQSAYIWIPRSQRDNLTPDV
FT                   IQNFLAYVPPSHAIDNQLASGIEVENWAIEVAKAYGVNIQEFYRTVLPAWIVNCIVNGT
FT                   SDERKNEKSWRAVELNSQGEDVDDFEYPMEPMYKFALPTMRKVMRNFSSQAILMYQNSV
FT                   AAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILAANVGRTKTRLFA
FT                   LAAPGDDNNVDRERHTTHDVSANRHSYSGAAIE"
FT   mat_peptide     376..1473
FT                   /product="coat protein"
XX
SQ   Sequence 1675 BP; 550 A; 251 C; 407 G; 467 T; 0 other;
     gggccataca tcaagtggtt tttaaaagaa ttaggtcttg aaggtgttgt taaaatgctg        60
     tcagcatttg gggataaatc agcatacgca ctatgtacat ttgcatatgt gcacaatgag       120
     ttgtctgatc cagttgtgtt caaaggagtt gtgaatggtg aaattgtacc accgcgaggt       180
     aacaatggtt ttggctggga tcctatattt aagcctgatg aatgtagttg tacatttgca       240
     gaaatgccaa gcagcatgaa gaatgatttt tcccacagaa gaagagcttt agagaaagtt       300
     aaattgtttc ttgataactt ggtggtgaag caaaaggaga agaaggcaag ggtggctctc       360
     acaattgatg ttcaggcctt aaatcaggag gaaatagaag cagagattac tgctttaaag       420
     aagctgtgga aagacaatgg gccaacaaga acgcgtagtc catttgaggc taggagattg       480
     agagccccac aagttgaacg tgtgaatgag ttacttcaga aactgaaaga tgaaggattg       540
     caaacaaaga agaggccatg tggagaacca gatgatgggg aagtggtaga tgatgatagt       600
     gatggtgata atcagagatc tggaaaggaa gttattgatg aaagccagaa taatcagcaa       660
     gttgacccaa gaaaaccaaa attcaaaatt agaggagatg gaagtgccat tagacgggat       720
     gacattgaca aaatcccaac taatgctctt gagattaaga agacatttaa gcctccaaag       780
     gtttcacagt cagcttacat ttggattcca cgctctcaga gggataatct aactcctgat       840
     gtaattcaga atttcctggc atatgtacct ccatctcatg ctatagataa tcaacttgct       900
     tcaggaatcg aagttgagaa ttgggcaatt gaggttgcta aagcatatgg agttaatata       960
     caggaatttt atcgcacagt tttgccagct tggattgtga actgtatagt gaatggtact      1020
     agcgatgaaa ggaagaatga gaaatcatgg cgagcagtcg agttgaattc tcaaggagaa      1080
     gatgttgatg attttgagta tccaatggag ccaatgtaca aatttgcatt gccaactatg      1140
     aggaaggtta tgagaaactt ctctagccaa gctatcctca tgtaccagaa tagtgttgct      1200
     gcaggcaagg catttgtgat aaaagctgct agaaatgctg gatacacaag cattgaaaat      1260
     aaatggctag gtatagattt tcttgccgaa gcccaattgt ctcagagtca acttgatatt      1320
     aagcatcaga ttctggcagc gaatgttggt agaacaaaga caaggctgtt tgcattagca      1380
     gctcctggtg atgataataa tgtggatagg gaaaggcaca cgacacacga tgtcagtgca      1440
     aacaggcaca gttacagtgg tgccgcaatt gaataaatga aatattagtg tttctgattg      1500
     agtttgaatg agattatagc ttagttggga agctaagcta tattttaaat tcgaattcaa      1560
     atacttaaat atcgtatttc gttttcaagt ttggtggagt tttggataac caattatatt      1620
     ttggttagat aagccagaat gtattttggg gatctttctc catatccttc tatta           1675
//