ID HM236370; SV 1; circular; genomic DNA; STD; VRL; 2631 BP. XX AC HM236370; XX DT 29-SEP-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Rhynchosia rugose golden mosaic virus-[Cuba:Camaguey:171:2009] segment DE DNA-A, complete sequence. XX KW . XX OS Rhynchosia rugose golden mosaic virus-[Cuba:Camaguey:171:2009] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2631 RX DOI; 10.1007/s00705-010-0803-0. RX PUBMED; 20852903. RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT "Two novel begomoviruses belonging to different lineages infecting RT Rhynchosia minima"; RL Arch. Virol. 155(12):2053-2058(2010). XX RN [2] RP 1-2631 RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT ; RL Submitted (17-MAY-2010) to the INSDC. RL Departamento de Proteccion de Plantas, Centro Nacional de Sanidad RL Agropecuaria, Carretera de Tapaste km 3 1/2, San Jose de Las Lajas, La RL Habana 32 700, Cuba XX DR MD5; 080c4fc60208328bf062fb39af06bd8f. XX FH Key Location/Qualifiers FH FT source 1..2631 FT /organism="Rhynchosia rugose golden mosaic FT virus-[Cuba:Camaguey:171:2009]" FT /segment="DNA-A" FT /host="Rhynchosia minima" FT /isolate="171" FT /mol_type="genomic DNA" FT /country="Cuba:Camaguey" FT /collected_by="E. Fiallo-Olive" FT /collection_date="2009" FT /clone="171H" FT /db_xref="taxon:889203" FT gene 205..960 FT /gene="AV1" FT CDS 205..960 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E2G6Z1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E2G6Z1" FT /protein_id="ADN84045.1" FT /translation="MPKRDLPWRSMAGTSKVSRNANYSPRAGSGPRVNKASEWANRPMY FT RKPRIYRILRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNTHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIMN" FT gene complement(957..1355) FT /gene="AC3" FT CDS complement(957..1355) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancement protein" FT /db_xref="GOA:E2G6Z2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E2G6Z2" FT /protein_id="ADN84046.1" FT /translation="MDSRTGELITARQAENGVYIWEIENPLYFKIYRVEDLLYTKTRVY FT HVHIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSIYLARFRHLVNLYLDQLGVISLNN FT VIRAVRFATDRSYVNHVLENHSIKFKFY" FT gene complement(1102..1491) FT /gene="AC2" FT CDS complement(1102..1491) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /db_xref="GOA:E2G6Z3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E2G6Z3" FT /protein_id="ADN84047.1" FT /translation="MRSSSPSQPPSIKTAHRQAKKRAIRRRRIDLQCGCSIYFHIGCTG FT HGFTHRGTHHCTSGGEWRVYLGDRKSPVFQDIQSRGPVVHQNEGIPRTHTVQPQPEESV FT ASPQSLPELPSLDDIDDSFWVNLFS" FT gene complement(1403..2488) FT /gene="AC1" FT CDS complement(1403..2488) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:E2G6Z4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E2G6Z4" FT /protein_id="ADN84048.1" FT /translation="MPSVKRFKVSAKNYFITYPQCSLTKEEALSQLQNLATPVNKKFIK FT ICRELHENGEPHLHVLIQFEGKYQCTNYRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQSANDSYAKALNADSVQSAMSILKEEQPKDFVLQNH FT NIRSNLERIFAKAPEPWVPPFPLSSFTAVPDEMQEWADDYFGRGSAARPERPLSLIVEG FT DSRTGKTMWARALGPHNYLSGHLDFNGRVYSNDVEYNVIDDVAPQYLKLKHWKELLGAQ FT KDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKEFLDKEENAGLKNWTLKNAIFITLT FT TALYQDSTQAGQEEGDQEAQD" FT gene complement(2074..2331) FT /gene="AC4" FT CDS complement(2074..2331) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E2G6Z5" FT /protein_id="ADN84049.1" FT /translation="MGSLISMCSYSSRENTSARITDSSIWSPQPGQHISIRTYRELNPA FT PTSSPTSTRTEIHWNGENSRSTEDLLEEASSLLMIHMPRR" XX SQ Sequence 2631 BP; 632 A; 628 C; 644 G; 727 T; 0 other; accggatggc cgcgcgcccc ccccctggtg ccgtacactc tcgcgcgctc cctcgtcctt 60 taatttcgaa ttaaaggtgg tccctggcgc ctgtgtccaa tcagaatgcg cctgacgagc 120 ctagatattt tgaacaactt gggcgcgaag ttgttgggcc gtctataaat gaaaagccca 180 ttggcccact gtctttaacc caaaatgcct aagcgcgatc tgccatggcg ctcgatggcg 240 ggaacctcaa aggttagccg caacgctaac tattctcctc gtgcaggtag tgggccaaga 300 gttaacaagg cctctgaatg ggcgaacagg cccatgtaca ggaagcccag gatataccgc 360 atactcagga cacccgatgt gcccagaggc tgtgaagggc cttgtaaagt gcagtcgtac 420 gaacagcgtc acgacatctc acatgtcggc aaggtcatgt gcatctctga tgttacacgt 480 ggtaatggca ttacccaccg tgtgggtaag cgtttttgtg tcaagtctgt gtatatttta 540 gggaagatct ggatggacga gaacatcaag ctgaagaacc acacgaacag tgtcatgttc 600 tggttggtca gagatcgtag accgtatggc acgcctatgg atttcggtca ggtgttcaac 660 atgttcgaca acgagccgag cactgccact gtgaagaacg atctccgcga tcgttaccag 720 gttatgcaca agttctatgg caaggtgaca ggtggacagt atgccagcaa cgagcaggcg 780 atagtcaaga ggttctggaa ggtcaacact catgtggtgt acaaccacca agaggctggc 840 aagtacgaga accacacgga gaacgccctg ttattgtata tggcatgtac tcatgcgtct 900 aaccctgtgt atgcaacttt gaagattcgg atctatttct acgattcgat catgaattaa 960 taaaatttga attttattga atgattttcc agtacatgat ttacatacga tctgtctgtc 1020 gcgaatcgaa cagccctgat tacattgttt aatgaaatca ctcctaattg atctaagtac 1080 aagttgacca aatgcctaaa cctagctaaa tagattgacc cagaagctgt catcgatgtc 1140 gtccagactt ggaagttcag gtaggctttg tggagatgca acgctctcct caggttgtgg 1200 ttgaaccgta tgtgtacgtg gtataccctc gttttggtgt acaacaggtc ctctactctg 1260 tatatcttga aatacagggg attttcgatc tcccagatat acacgccatt ctccgcctga 1320 cgtgcagtga tgagttcccc tgtgcgtgaa tccatgtccc gtacagccta tgtggaagta 1380 gatggagcac ccgcactgca gatcaatcct gcgcctcctg atcgccctct tcttggcctg 1440 cctgtgtgct gtcttgatag agggcggttg tgagggtgat gaagatcgca ttcttgagag 1500 tccaattctt tagtcctgca ttttcctctt tgtccaggaa ctctttataa ctggcaccct 1560 caccaggatt gcaaagcacg attgctggga ttccaccttt aatttgaaca ggcttgccgt 1620 atttgcaatt tgactgccag tccttttggg cccccagcaa ttctttccag tgctttagct 1680 ttagatattg cggtgcgacg tcatcaatga cgttatactc gacgtcgttc gagtagaccc 1740 gaccattgaa gtccaggtgt ccactgaggt agttgtgtgg gcctaacgca cgtgcccaca 1800 tcgtcttccc tgtcctcgag tcaccttcta ctatcaaact caatggtctt tctggccgcg 1860 cagcggaacc tctcccaaaa taatcatccg cccactcctg catctcgtcg ggaacggctg 1920 tgaaagagga gagtggaaac ggaggaaccc atggttccgg agcctttgcg aatattctct 1980 cgagattgga gcggatgtta tgattctgca agacgaagtc ctttggctgt tcttccttta 2040 aaatggacat ggcagattga acagaatctg catttaacgc cttggcatat gaatcattag 2100 cagactgctg gcctcctcga gcagatcttc cgtcgatctg gaattctccc cattccagtg 2160 tatctccgtc cttgtcgatg taggacttga cgtcggagct ggatttagct ccctgtatgt 2220 tcggatggaa atgtgctgac ctggttgggg agaccagatc gaagaatctg taattcgtgc 2280 actggtattt tccctcgaac tgtatgagca catggagatg aggctcccca ttctcatgaa 2340 gctctctgca aatcttgatg aatttcttgt taactggagt tgctaggttt tgtaattggg 2400 aaagtgcctc ttcttttgtc agagagcact gtggataggt tatgaaatag tttttggctg 2460 agactttgaa acgcttaact gatggcattt ttgtaataag aagggtgtac cccgattgag 2520 ctctctcaaa tctgtgctat gaattggggt aaaggggtac tatatatact agaagtctct 2580 atagaacttt caatcctcat cgcacacgtg gcggccatcc gctataatat t 2631 //