ID HM236368; SV 1; circular; genomic DNA; STD; VRL; 2609 BP. XX AC HM236368; XX DT 29-SEP-2010 (Rel. 106, Created) DT 23-SEP-2018 (Rel. 138, Last updated, Version 3) XX DE Rhynchosia golden mosaic Havana virus-[Cuba:Havana:28:2007] segment DNA-A, DE complete sequence. XX KW . XX OS Rhynchosia golden mosaic Havana virus-[Cuba:Havana:28:2007] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2609 RX DOI; 10.1007/s00705-010-0803-0. RX PUBMED; 20852903. RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT "Two novel begomoviruses belonging to different lineages infecting RT Rhynchosia minima"; RL Arch. Virol. 155(12):2053-2058(2010). XX RN [2] RP 1-2609 RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT ; RL Submitted (17-MAY-2010) to the INSDC. RL Departamento de Proteccion de Plantas, Centro Nacional de Sanidad RL Agropecuaria, Carretera de Tapaste km 3 1/2, San Jose de Las Lajas, La RL Habana 32 700, Cuba XX DR MD5; 0b112d026bde15d505e8c0791acbceac. XX FH Key Location/Qualifiers FH FT source 1..2609 FT /organism="Rhynchosia golden mosaic Havana FT virus-[Cuba:Havana:28:2007]" FT /segment="DNA-A" FT /host="Rhynchosia minima" FT /isolate="28" FT /mol_type="genomic DNA" FT /country="Cuba:Havana" FT /collected_by="E. Fiallo-Olive" FT /collection_date="2007" FT /clone="28H" FT /db_xref="taxon:889202" FT gene 198..947 FT /gene="AV1" FT CDS 198..947 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E2G6Y4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:E2G6Y4" FT /protein_id="ADN84038.1" FT /translation="MPKRDGSWRSMAGTSKVSRNANYSPRSGPTSNRANAWVNRPMYRK FT PRIYRMYRSPDVPKGCEGPCKIQSFEQRHDISHTGKVMCISDVTRGNGITHRVGKRFCV FT KSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKN FT DLRDRFQVMHKFYSKVTGGQYASNEQAIVKRFWKVNNNVVYNHQEAAKYENHTENALLL FT YMACTHASNPVYATLKIRIYFYDSIMN" FT gene complement(944..1342) FT /gene="AC3" FT CDS complement(944..1342) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancement protein" FT /db_xref="GOA:E2G6Y5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E2G6Y5" FT /protein_id="ADN84039.1" FT /translation="MDSRTGEPITAVQATSGVYIWEVPNPLYFKIIEVEKPIFTHTTVF FT HLQIRANHNLRKALALHKAYFNFQVWTTLTTASGQIYLSRFKFLVMQFLDNLGVISINN FT VIRAVSYATNKSYVNDVLENHIIKFKIY" FT gene complement(1089..1505) FT /gene="AC2" FT CDS complement(1089..1505) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /db_xref="GOA:E2G6Y6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E2G6Y6" FT /protein_id="ADN84040.1" FT /translation="MTGQRKTPSSSPLKNLSSPPQIKPRHRYAKKQVRRRRIDLQCGCS FT IYIHINCRNNGFTHRGTHHCSSSNEWRLYLGGSKSPVFQDNRSRETNIHTHDGVPLTNQ FT SQPQPEESVGSPQSLLQFPSLDDFDDSIWADLFK" FT gene complement(1390..2475) FT /gene="AC1" FT CDS complement(1390..2475) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:E2G6Y7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E2G6Y7" FT /protein_id="ADN84041.1" FT /translation="MPLQRRFRLNAKNFFLTYPKCSISKEEALGQLLSIPTPVNKKFIK FT ICKELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSTTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLQWGEFQIDGRSARGGQQTANDSYAKALNAESAEQALQIIKEHQPQHFVLQYH FT NLVSNITKIFHKPPEPWVPPFQLSTFNNVPAIMSEWVNVNISDAAARPLRPISIIVEGP FT SRTGKTIWARSMGPHNYLCGHIDLNPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNCKYGKPIQIKGGIPTIFLCNPGPHSSYKEFLGEEKNTSLHDWAKKNAIFVSIEEPL FT FTTTNQTAAQIREKTSETKKD" FT gene complement(2061..2318) FT /gene="AC4" FT CDS complement(2061..2318) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E2G6Y8" FT /protein_id="ADN84042.1" FT /translation="MGNLIFTCSSSSKANTSARITDSSTWYPQPGQHISIQTYRELNQA FT QTSSPTSTRMEIHFNGESFKSTAGLLEEDNKLRTTHMQRR" XX SQ Sequence 2609 BP; 678 A; 489 C; 602 G; 840 T; 0 other; accggatggc cgaccagcgt attggtgtat gccgtactgc acgtgttgct ttattttgaa 60 ttaaagatta aagtggtgcg ttgtccaatc atatgcgcac ttgtgagtct agttatttgt 120 gttcaaactt agtggccaag tttgctttca tttaaatacg atccagctta cgtggatcga 180 acatgcttta attcaaaatg cctaagcgcg atggctcttg gcgttctatg gcggggacct 240 ccaaggtgag ccgcaatgct aattactctc cacgttctgg cccaacgtct aacagggcca 300 atgcttgggt taacaggccc atgtatagga agcccagaat ttataggatg tacagatccc 360 ctgatgttcc taagggttgt gaagggccct gtaaaattca atcatttgaa cagcgacatg 420 atatttctca tactggtaag gttatgtgta tatccgacgt cacacgtggt aatggtatta 480 cccatcgtgt tggaaaacga ttttgtgtga aatctgtgta catattaggt aaggtatgga 540 tggacgacaa catcaagtta aagaaccata ccaacagcgt catgttttgg ttggttaggg 600 atagaagacc gtatggaact cctatggatt ttggacaagt ttttaatatg ttcgacaatg 660 aacctagtac agcaactgtt aagaatgatt tgcgtgatcg ttttcaagtt atgcacaagt 720 tttactccaa agttacaggt ggacaatatg caagtaatga acaggcaatt gttaagcggt 780 tttggaaggt gaataacaat gtcgtctata atcaccagga agcagcaaag tacgagaacc 840 atactgagaa tgcgttatta ttgtatatgg catgtactca tgcttcgaat cctgtgtatg 900 caactcttaa aattcggatc tatttttatg attcgataat gaattaataa atcttgaatt 960 ttattatatg attttccagt acatcgttga cataactttt gttcgtcgca taggaaacag 1020 ctctaattac attattaatt gaaataacac ctaaattgtc taagaactgc attacaagaa 1080 acttgaatct acttaaataa atctgcccag atgctgtcgt caaagtcgtc caaacttgga 1140 aattgaagta agctttgtgg agagccaacg ctttcctcag gttgtggttg gctctgattt 1200 gtaagtggaa caccgtcgtg tgtgtgaata ttggtttctc tacttcgatt atcttgaaat 1260 acaggggatt tggaacctcc caaatataaa cgccactcgt tgcttgaact gcagtgatgg 1320 gttcccctgt gcgtgaatcc attgttcctg cagttaatat gaatataaat agaacagccg 1380 cactgcagat caatccttct tcgtctcact tgttttttcg cgtatctgtg ccgcggtttg 1440 atttgtggtg gtgaagagag gttcttcaat ggagacgaag atggcgtttt tctttgccca 1500 gtcatggagt gatgtgtttt tttcttcgcc gaggaactcc ttatatgatg aatgggggcc 1560 tggattgcaa aggaagatag tgggaattcc acctttaatt tgaattggct ttccgtattt 1620 gcagtttgat tgccaatccc tttgtgcccc catgaactct ttaaagtgct ttagataatg 1680 cggatcaacg tcatcgataa cgttgtacca tgcatcattg gagtatatct tcggattgag 1740 atcgatatga ccacatagat aattgtgagg gcccatgctt cgggcccata ttgttttgcc 1800 cgtccttgat ggtccttcaa caataattga tataggtctc aatggccgcg cagcggcatc 1860 ggaaatatta acgttaaccc attccgacat tatcgccggg acattattga atgtggacaa 1920 ttgaaatgga ggaacccatg gttccggtgg tttatgaaat attttcgtta tgttggacac 1980 caggttatgg tattggagga caaaatgttg tggttgatgc tctttgataa tctgcagagc 2040 ctgttctgca gattctgcat ttaacgcctt tgcatatgag tcgttcgcag tttgttgtcc 2100 tcctctagca gacctgccgt cgatttgaaa ctctccccat tgaagtgtat ctccatcctt 2160 gtcgatgtag gacttgacgt ctgagcttga tttagctccc tgtatgtttg gatggaaatg 2220 tgctgacctg gttgtggata ccaggtcgaa gaatctgtta ttcgtgcact ggtatttgcc 2280 ttcgaactgg atgagcacgt gaagatgagg ttccccattt tcatgaagtt ctttgcaaat 2340 cttgatgaac ttcttgttta cgggagtcgg aatggacaat agctgaccta gggcttcttc 2400 ttttgagatg gagcatttgg ggtatgtgag gaagaagttc ttggcattta agcgaaatcg 2460 cctctgtaat ggcatttctg taataagaag ggtgtacccc gattgaggct ctcaacactg 2520 gctcattata ttggtgtatt ggggtgcaat atatagtata ccttctattc gttatctgct 2580 tacacgtgga ggccatccgt tataatatt 2609 //