ID   HM175714; SV 1; linear; genomic RNA; STD; VRL; 1436 BP.
XX
AC   HM175714;
XX
DT   13-SEP-2010 (Rel. 106, Created)
DT   13-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Trillium crinkled leaf virus isolate 20807747 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Trillium crinkled leaf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1436
RA   Monger W.A.;
RT   "A virus of Trillium plants which causes severe symptoms and plant death";
RL   Unpublished.
XX
RN   [2]
RP   1-1436
RA   Monger W.A.;
RT   ;
RL   Submitted (30-APR-2010) to the INSDC.
RL   Plant Health, Food and Environment Research Agency, Sand Hutton, York YO41
RL   1LZ, UK
XX
DR   MD5; 2ab19bd0678f2541e7f39acdf2afe6e0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1436
FT                   /organism="Trillium crinkled leaf virus"
FT                   /host="Trillium viridescens"
FT                   /isolate="20807747"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:598671"
FT   CDS             <1..1363
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E0Z079"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:E0Z079"
FT                   /protein_id="ADM89619.1"
FT                   /translation="STVVDNTLMVIIAMYYALEREGIENHQEKLKFFANGDDLIIAVKP
FT                   EFEFVLDKMAASFEELGLNYEFNSRTRNKEELSFMSHRGVSRDGIFIPKLDKERIVAIL
FT                   EWDRSEEPEHRLCAVVSAMIEAWGYDELLHEIRKFYSWLLGQMPFNQLAQQGKAPYIAE
FT                   TALRNLYIDVVATNEELMNYACEVTAMHGEVATYVWHQSSDAGASSRQPIVPRDKDVDA
FT                   GSVGNFKVSRLKPLDRKMRFPRVGKTVIVNADHLLQYRPKQEDVSNAIATQAQFAAWYE
FT                   SLKADYGKTDDEMRIILDGLMVWCIENGTSPNLNGDWTMMDGDEQVSYPLKPVLDFAKP
FT                   TFRQIMGHFSDVAEAYIEIRNATEKYMPRYGRQRNITDPSLARYAFDFYVTTSRTPTRA
FT                   VEACHQMKAAALAGSKNKLFGLDGNVGATEEDTERHTVGDSSANVHNVTGARLM"
FT   mat_peptide     <1..604
FT                   /product="RNA polymerase"
FT   mat_peptide     605..1360
FT                   /product="coat protein"
FT   3'UTR           1364..1436
XX
SQ   Sequence 1436 BP; 447 A; 265 C; 363 G; 361 T; 0 other;
     ctcaacagtt gtggataata cactaatggt gatcatcgcg atgtactacg cactggagag        60
     ggaaggtatt gagaatcatc aagaaaaact gaagttcttt gcgaatggtg atgatctcat       120
     aatagcagtg aaacccgaat ttgaatttgt cttggacaag atggcggcat cgtttgaaga       180
     gcttggttta aactatgaat ttaacagtcg caccaggaat aaggaagaac tctccttcat       240
     gtcacacagg ggcgtttcac gagatggaat atttataccg aagctggata aggagcgcat       300
     agtcgcaatc ttggagtggg atcgaagcga ggaaccagaa cacagattgt gcgcagtggt       360
     ttcagcaatg attgaagcat ggggatacga tgaacttctt catgagatac ggaaattcta       420
     cagctggtta cttgggcaaa tgccattcaa tcaattagcc cagcaaggaa aggcacctta       480
     tatagctgaa actgctctca ggaatttgta tattgatgtg gtggcaacaa atgaggaact       540
     gatgaattac gcatgtgaag tcacagcgat gcatggggag gtcgcaacgt atgtttggca       600
     tcaaagcagt gatgctggtg catcaagtag acaaccaata gtgccacgtg ataaagatgt       660
     tgacgcagga tctgttggaa attttaaagt gtctcgtcta aagccacttg accggaaaat       720
     gagatttccg cgtgttggaa aaaccgtgat tgtgaatgct gaccatctat tacaatacag       780
     gccaaagcaa gaggacgttt caaacgcaat cgcaacgcag gcacagtttg ccgcatggta       840
     tgaaagtcta aaagcagact atggaaagac tgatgatgag atgcgcatta ttctggatgg       900
     attaatggtg tggtgcatcg aaaatggaac atccccaaat cttaatggag attggacaat       960
     gatggatggt gatgaacagg tttcatatcc cttgaaaccg gtccttgatt ttgcaaaacc      1020
     cactttcagg caaatcatgg gacactttag tgatgttgca gaggcttata tcgaaattag      1080
     aaatgcaact gagaaataca tgcctcgata tgggcgtcag cgcaacataa ccgacccgag      1140
     tctagcgcgt tatgcttttg acttttatgt cactacatca cgcacaccaa ctagagcggt      1200
     ggaagcatgc caccaaatga aagcagcagc tcttgctggt agcaagaata aattgtttgg      1260
     actcgatggg aatgtcggtg caacggaaga agatacagag aggcacacag ttggagattc      1320
     cagcgcaaat gttcataatg tgactggtgc ccgtttaatg taaattagac ctgttttatg      1380
     tgttcgtccg taatagctat taagcaaact tccattcgca taggaaagca gtgagg          1436
//