ID   HM175713; SV 1; linear; genomic RNA; STD; VRL; 1477 BP.
XX
AC   HM175713;
XX
DT   13-SEP-2010 (Rel. 106, Created)
DT   13-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Trillium crinkled leaf virus isolate 20807746 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Trillium crinkled leaf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1477
RA   Monger W.A.;
RT   "A virus of Trillium plants which causes severe symptoms and plant death";
RL   Unpublished.
XX
RN   [2]
RP   1-1477
RA   Monger W.A.;
RT   ;
RL   Submitted (30-APR-2010) to the INSDC.
RL   Plant Health, Food and Environment Research Agency, Sand Hutton, York YO41
RL   1LZ, UK
XX
DR   MD5; 974f49f1c638203a1cf1baeffb3ebc22.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1477
FT                   /organism="Trillium crinkled leaf virus"
FT                   /host="Trillium luteum"
FT                   /isolate="20807746"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:598671"
FT   CDS             <1..1369
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E0Z078"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:E0Z078"
FT                   /protein_id="ADM89618.1"
FT                   /translation="QPSTVVDNTLMVVIAMYYVFEREGIQDHQEKVKFFANGDDLIIAV
FT                   KPEFEWVLDRMASSFEELGLNYEFNSRTRNKDELSFMSHKGVPRDGIFIPKLDKERIVA
FT                   ILEWDRSEEPEHRLCAIVSAMIEAWGYDELLHEIRKFYSWLLGQTPFSQLVQQGKAPYI
FT                   AETALRNLYTDVMATNEELMAYACEIVEMHGDVETYVWHQSSDAGTSGGQPIIPRDKDV
FT                   DAGSVGSFKVSRLKPLDRKMRFPRVGKTVIVSADHLLQYRPNQEGISNAIATQAQFAAW
FT                   YESLKADYKKNDEEMRIILDGLMVWCIENGTSPNLNGDWTMMDGDEQVSYPLKPVLDFA
FT                   KPTFRQIMGHFSDVAEAYIEIRNATEKYMPRYGRQRNITDPSLARYAFDFYVTTSRTPT
FT                   RAVEACHQMKAAALAGSKNKLFGLDGNVGATEEDTERHTVGDSSARVHNVSGARLM"
FT   mat_peptide     <1..610
FT                   /product="RNA polymerase"
FT   mat_peptide     611..1366
FT                   /product="coat protein"
FT   3'UTR           1370..1477
XX
SQ   Sequence 1477 BP; 437 A; 294 C; 382 G; 364 T; 0 other;
     tcaaccatcc acagttgtgg acaatacatt gatggtggtt atagctatgt actatgtttt        60
     tgaacgagaa ggaatacaag accatcagga aaaggtgaaa ttctttgcaa atggcgacga       120
     tctaatcata gcagtgaagc ctgaatttga atgggtcttg gacagaatgg cttcgtcatt       180
     tgaggagctc ggcttgaatt atgaattcaa tagcagaaca aggaataaag acgaactttc       240
     attcatgtca cacaaagggg ttccacgtga cggaattttt atcccaaagc ttgacaagga       300
     gcggatagtg gcaattctgg aatgggaccg gagtgaggaa ccggagcaca gattgtgtgc       360
     aatagtgtca gcaatgattg aggcatgggg ttatgatgaa ttacttcatg agatacggaa       420
     attttacagc tggttgctcg ggcaaacccc attcagccaa ttggttcagc agggtaaagc       480
     accctacatc gctgagactg cactcagaaa tttgtacact gatgtgatgg caactaatga       540
     ggaactgatg gcttatgcat gtgagattgt ggaaatgcat ggggatgttg aaacttatgt       600
     gtggcaccaa agcagtgatg caggcacttc aggtgggcag ccaataatac cacgtgacaa       660
     agatgtggat gcaggatcgg tcggaagctt caaagtttcc cgcctcaagc cacttgatcg       720
     gaagatgagg ttcccgcgcg tgggaaagac cgtcattgtg agtgctgacc acctacttca       780
     gtaccgacca aatcaagagg gtatctcgaa tgccatcgca acacaggcac aatttgccgc       840
     atggtacgag agcttgaagg cggactacaa aaagaatgac gaagaaatgc gcatcatact       900
     ggatggatta atggtgtggt gcattgaaaa tggtacatca ccgaatctaa atggcgattg       960
     gactatgatg gatggtgatg aacaggtttc atatcccttg aaaccagtcc ttgactttgc      1020
     caaacccact ttcaggcaaa tcatgggaca ttttagcgac gttgcggagg cctatattga      1080
     aataagaaac gctactgaaa agtacatgcc tcgatatggg cgtcagcgca acattaccga      1140
     cccgagttta gcgcgttatg cttttgactt ttatgtcact acatcacgca caccaactag      1200
     agcggtggaa gcatgccacc aaatgaaagc agcagctcta gctggtagca agaacaaatt      1260
     gtttggactc gatgggaatg tcggtgcaac ggaggaagat acagagaggc acacagttgg      1320
     tgattcaagc gcacgtgttc ataacgtgtc cggtgcccgt ttaatgtaat ttaaacctgt      1380
     tttatgtgtt cgtccgtaat agctactaag caaacttcca ttcgcatatg acagcagtga      1440
     ggcgacctcg agacttttgt atgcgcgtgt acaagtt                               1477
//