ID HM164547; SV 2; circular; genomic DNA; STD; VRL; 2762 BP. XX AC HM164547; XX DT 07-SEP-2010 (Rel. 106, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 3) XX DE Honeysuckle yellow vein virus, complete sequence. XX KW . XX OS Honeysuckle yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2762 RA Lee H.J., Song W.G., Kwak H.R., Kim J.D., Kim M.K., Park J.A., Lee S.C., RA Choi H.S.; RT "Molecular phylogenetic relationships of Tomato Yellow Leaf Curl Virus RT (TYLCV) and Bemisia tabaci"; RL Unpublished. XX RN [2] RP 1-2762 RA Kim M.K., Kwark H.R., Kim J.D., Lee H.J., Park J.A., Lee S.C., Choi H.S.; RT ; RL Submitted (29-APR-2010) to the INSDC. RL Departement of Agricultural Biology, Agricultural Microbiology Division, RL National academy of Agricultural Science, RDA, 150, Suinro, Kwoenseon-gu, RL Suwon, Gyeongi-do 441-707, Repubilc of Korea XX RN [3] RC Sequence update by submitter RP 1-2762 RA Kim M.K., Kwark H.R., Kim J.D., Lee H.J., Park J.A., Lee S.C., Choi H.S.; RT ; RL Submitted (15-MAR-2011) to the INSDC. RL Departement of Agricultural Biology, Agricultural Microbiology Division, RL National academy of Agricultural Science, RDA, 150, Suinro, Kwoenseon-gu, RL Suwon, Gyeongi-do 441-707, Repubilc of Korea XX DR MD5; 3618fda1ba708c8ce47f73187ba9e096. XX CC On Mar 15, 2011 this sequence version replaced HM164547.1. XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="Honeysuckle yellow vein virus" FT /host="tomato" FT /isolate="TLCV-Korea-KJ" FT /mol_type="genomic DNA" FT /country="South Korea" FT /collection_date="Dec-2007" FT /db_xref="taxon:240865" FT gene 136..477 FT /gene="V2" FT CDS 136..477 FT /codon_start=1 FT /gene="V2" FT /product="movement protein" FT /db_xref="GOA:E0YU80" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E0YU80" FT /protein_id="ADM47744.1" FT /translation="MWDPLLNDFPETVHGFRCMLAVKYLLLVEATYSPDTVGYDLIRDL FT IGVIRAKNYVEATCRYRDFHTRLQGTAPSELRQPVCQPCECPHCPRHKQKEIVGSKAHV FT QEAQDVPNV" FT gene 296..1069 FT /gene="V1" FT CDS 296..1069 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:E0YU81" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E0YU81" FT /protein_id="ADM47745.1" FT /translation="MSKRPADIGIFTPVSKVRRRLNFDSPYANRASAPIALVTNKRRSW FT AQRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEKKNDVGHSGTLLCVSDITRGNGLTH FT RVGKRFCIKSVYIIGKIWMDENIKTKNHTNNVLFWLVRDRRPGSTPYGFQEAFNMFENE FT PSTATVKQELRDRLQVLHRFSATVTGGQYASKEQAVIKRFWKLNHHVTYNHQEQAKYEN FT HTENALLLYMAATHASNPVYATLKIRVYFYDSVQN" FT gene complement(1066..1470) FT /gene="C3" FT CDS complement(1066..1470) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:E0YU82" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E0YU82" FT /protein_id="ADM47746.1" FT /translation="MDSRTGVTITAAQAWNGAYIWTVPNPLYFKITKHAQRPFNMDQDI FT ITLQIQFNHNLRSQLGLHKCFLTFNIWTLLHPQTSHFLRVFRTQVLKYLDNLGVISINN FT VIRAVDHVLYNVLEGTEYVQTLHDIKFKLY" FT gene complement(1211..1618) FT /gene="C2" FT CDS complement(1211..1618) FT /codon_start=1 FT /gene="C2" FT /product="transactivator protein" FT /db_xref="GOA:E0YU83" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E0YU83" FT /protein_id="ADM47747.1" FT /translation="MQPSSPSTAHSTQVPIKVRHRSEKRRAPRRRRIDLICGCSIYVAL FT GCANHGFTHRGHHHCSSGMEWRVYLDRAQSPIFQNHEARTTTIQHGPGHNNSTDTIQPQ FT PQISTGSTQVLPDLQYLDSLTSSDLAFLEGI" FT gene complement(1518..2609) FT /gene="C1" FT CDS complement(1518..2609) FT /codon_start=1 FT /gene="C1" FT /product="replication associated protein" FT /db_xref="GOA:E0YU84" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E0YU84" FT /protein_id="ADM47749.1" FT /translation="MAPPKRFQINSKNYFLTYPHCSLTKEEALSQIQNLDTPTNKLFIR FT ICRELHEDGSPHLHVLIQFEGKYRCTNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKTYM FT EKDGDVVDFGVFQVDGRSARGGCQSANDAYAEAINSGSKSSALSILREKAPKDFVLQFH FT NLNSNLDRIFAPQLEEFVCPFLSSSFDQVPEELEAWAAENVRDSAARPWRPVSIVIEGD FT SRTGKTMWARSLHPRHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEEKNAALKAWAIKNATFVTLYGS FT LYSGTHQGATQVREEESTSQTED" FT gene complement(2159..2452) FT /gene="C4" FT CDS complement(2159..2452) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E0YU85" FT /protein_id="ADM47748.1" FT /translation="MGALISTSSSNSRENTDAQINDSSISYPHLGQHISIRTFRELRAR FT RTLKPIWKKTETSLILEFSKSMEDQLEEVANLPTTHMPRQSIQDPSHRRCLY" XX SQ Sequence 2762 BP; 727 A; 548 C; 652 G; 835 T; 0 other; accggatggc cgcccgaaat ttcgtggtgg gcccccctgt cggccaatga gatttgtgct 60 gtggaagtaa gataagtgga aagtgacgta cgcttttgtt tttatatacg tcagccctaa 120 tttgaacggt gtgagatgtg ggatccttta cttaacgatt ttcctgaaac cgttcacggt 180 ttcaggtgta tgctagcggt taaatatctc cttcttgtag aggctacgta ttctccggat 240 acggtgggtt acgatctgat ccgtgatctt ataggtgtga ttcgtgccaa gaattatgtc 300 gaagcgacct gcagatatag ggattttcac acccgtctcc aaggtacggc gccgtctgaa 360 cttcgacagc ccgtatgcca accgtgcgag tgcccccatt gccctcgtca caaacaaaag 420 gagatcgtgg gctcaaaggc ccatgtacag gaagcccagg atgtaccgaa tgtatagaag 480 ccctgatgtg cctaaagggt gtgaaggccc gtgtaaggtc cagtcctttg agaagaaaaa 540 tgatgtgggt cattctggta ccctgctctg tgtgtctgat atcacccgtg gtaatgggct 600 tactcatcgt gttgggaaga gattttgtat aaaatctgtt tatattattg gtaaaatatg 660 gatggatgaa aatattaaga ccaagaatca cactaacaat gtgttattct ggttagttag 720 agatagaaga cctggctcaa ctccatatgg ttttcaggag gcatttaata tgtttgagaa 780 tgaacccagt acggctactg tcaagcagga attaagggat cgtttgcagg ttttacacag 840 gtttagtgca actgttactg gtggacaata tgcgtctaag gaacaagctg tcataaagag 900 gttctggaag ttgaatcacc atgtcactta caatcatcag gagcaggcta aatatgagaa 960 tcatacggaa aatgctttat tattgtatat ggctgctact catgccagta atccagtata 1020 tgctacatta aaaattagag tgtattttta cgattcagta caaaattaat aaagtttgaa 1080 ttttatatca tgaagtgttt gtacatactc tgttccctct aatacattat acaatacatg 1140 atcaactgct ctaattacat tgttaattga aattacaccc aaattatcta agtactttaa 1200 cacctgcgtc ctaaataccc tcaagaaatg cgaggtctga ggatgtaaga gagtccaaat 1260 attgaaggtc aggaagcact tgtgtagacc cagttgagat ctgaggttgt ggttgaattg 1320 tatctgtaga gttattatgt cctggtccat gttgaatggt cgttgtgcgt gcttcgtgat 1380 tttgaaatat aggggattgg gcacggtcca gatatacgcg ccattccatg cctgagctgc 1440 agtgatggtg acccctgtgc gtgaatccat ggtttgcgca acccaatgcg acgtaaatag 1500 aacacccgca aatcagatca atcctccgtc tgcgaggtgc tctcctcttc tctgacctgt 1560 gtcgcacctt gatgggtacc tgagtagagt gagccgtaga gggtgacgaa ggttgcattt 1620 ttaattgccc atgcttttag ggctgcgttc ttctcttcgt ctaaatactc ggtgtatgat 1680 gacgttgggc ctggattgca gaggaagatt gttgggatac cacctttaat ttgaattggt 1740 ttcccgtact tggtgttgct ttgccagtcc ctttgggccc ccatgaactc cttaaagtgc 1800 tttaagtagt ggggatccac atcatcaatt acgttatacc aagcatcgtt gctgtaaacc 1860 ttggggctta agtcaagatg tccacataga tagttatgac gtggatgtag tgacctggcc 1920 cacatagttt tccctgtcct gctatccccc tctatcacaa tactcacggg tctccacggc 1980 cgcgcagcgg aatccctaac attctcagca gcccatgcct caagttcctc gggaacttga 2040 tcaaaagaag aagataaaaa tggacaaaca aattcctcta attgaggagc aaaaatccta 2100 tctaaattac tatttaagtt atggaactgt aaaacaaaat ctttgggagc tttctccctt 2160 aatatagaca acgccgatga cttggatcct gaattgattg cctcggcata tgcgtcgttg 2220 gcagattggc aacctcctct agctgatctt ccatcgactt ggaaaactcc aaaatcaacg 2280 acgtctccgt ctttttccat ataggtttta acgtccgacg agctcttagc tccctgaatg 2340 ttcggatgga aatgtgctga cctagatggg gatacgagat cgaagaatcg ttgatttgtg 2400 catctgtatt ttccctcgaa ttggatgagg acgtggagat gagggctccc atcttcgtgt 2460 agttctctgc agattcggat gaataattta ttcgttggtg tatctaggtt ttggatttgg 2520 gaaagggctt cttctttggt tagagagcag tgtgggtatg tgaggaagta atttttagaa 2580 tttatttgaa atcttttagg cggagccatt gacttggtca attggtacca attgatctct 2640 ctcatggtat cggtacattg gtaccaatat atatggtggt acctaatggc attcttgtaa 2700 tttgggaaag tggagcgtgt tttagaaatt caaattggta aagcggccat ccgtataata 2760 tt 2762 //