ID   HM163576; SV 1; circular; genomic DNA; STD; VRL; 2628 BP.
XX
AC   HM163576;
XX
DT   11-AUG-2010 (Rel. 105, Created)
DT   11-AUG-2010 (Rel. 105, Last updated, Version 1)
XX
DE   Melon chlorotic mosaic virus isolate 2009-02-04-06 segment DNA-A, complete
DE   sequence.
XX
KW   .
XX
OS   Melon chlorotic mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-2628
RX   DOI; 10.1007/s00705-010-0760-7.
RX   PUBMED; 20665058.
RA   Romay G., Chirinos D., Geraud-Pouey F., Desbiez C.;
RT   "Association of an atypical alphasatellite with a bipartite New World
RT   begomovirus";
RL   Arch. Virol. 155(11):1843-1847(2010).
XX
RN   [2]
RP   1-2628
RA   Romay G., Chirinos D., Geraud F., Desbiez C.;
RT   ;
RL   Submitted (29-APR-2010) to the INSDC.
RL   INRA, Domaine Saint Maurice, Montfavet 84140, France
XX
DR   MD5; bd008dd7e86f484f24592df5802031c2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2628
FT                   /organism="Melon chlorotic mosaic virus"
FT                   /segment="DNA-A"
FT                   /host="watermelon"
FT                   /isolate="2009-02-04-06"
FT                   /mol_type="genomic DNA"
FT                   /country="Venezuela"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:180399"
FT   CDS             203..958
FT                   /codon_start=1
FT                   /product="AV1"
FT                   /note="coat protein"
FT                   /db_xref="GOA:D9ZNP6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:D9ZNP6"
FT                   /protein_id="ADK97750.1"
FT                   /translation="MVKRDAPWRMMAGTAKVSRSANYSPRAGLGPKFDKAHAWVNRPMY
FT                   RKPRIYRTLRGADVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYIIGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMEFGQVFNMYDNEPSTATI
FT                   KNDLRDRFQVMHRFYSKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAAKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(955..1353)
FT                   /codon_start=1
FT                   /product="AC3"
FT                   /note="rep enhancer"
FT                   /db_xref="GOA:D9ZNP7"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:D9ZNP7"
FT                   /protein_id="ADK97751.1"
FT                   /translation="MDSRTGESITVYQAENSVFIWTVPNPLFFKIYHVEQPIYTRTRIY
FT                   HIQIRFNHNLRKALDLHQAFLNFQIWTTSLTASGTTYLNRFKHVVMHYLNMLGVIGLNN
FT                   VVRAVRFATNRKYVTDVLENHVIKFKFY"
FT   CDS             complement(1100..1489)
FT                   /codon_start=1
FT                   /product="AC2"
FT                   /note="transactivator"
FT                   /db_xref="GOA:D9ZNP8"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:D9ZNP8"
FT                   /protein_id="ADK97752.1"
FT                   /translation="MLTSSSSTPPSIKTKHRIAKKKGVRRRRIDLNCGCSIFVHIACAE
FT                   NGFTHGGEHHCLSGREFRFYLDGSKSPVFQNIPRRTTDIHKNQNLPHTNQVQPQLEEGT
FT                   GSTPSFSQLPNLDDFTDSFWDDLFK"
FT   CDS             complement(1413..2495)
FT                   /codon_start=1
FT                   /product="AC1"
FT                   /note="Rep protein"
FT                   /db_xref="GOA:D9ZNP9"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:D9ZNP9"
FT                   /protein_id="ADK97754.1"
FT                   /translation="MPRSPKSFRVAAKNIFLTYPQCDIPKDEALKMLQELAWTVVKPKY
FT                   IRVAREEHSDGSPHLHCLIQLSGKSNIKNARFFDLTHPRRSACFHPNIQAAKDSNAVKN
FT                   YITKEGDYCESGEYKVSGGTKSNKDDVFHNAINAGTAEEALAIIKAGDPKTFVVNYHNV
FT                   KANIERLFQKDEDPWVPPFQLSSFNNVPQEMKDWVDENVTAARAACMTPAGPVRPRSII
FT                   IEGDSRTGKTMWARAIGPHNYLSGHLDFNARVYSNNVMYNVIDDVGPQYLKLKHWKELI
FT                   GAQRDWQSNCKYGKPVKIKGGIPSIVLCNPGDGASYKAFLDKEENASLRAWTLKNANFV
FT                   FLNAPLYQDEAQNSQEEGRS"
FT   CDS             complement(2051..2416)
FT                   /codon_start=1
FT                   /product="AC4"
FT                   /db_xref="UniProtKB/TrEMBL:D9ZNQ0"
FT                   /protein_id="ADK97753.1"
FT                   /translation="MKLLRCFKNWHGQLSNRNISESQERNTPTALHTYTVSYSYPESRT
FT                   SRMQDFSTLLTPEGLPVFTQTFRQPKTPTPSRITSPKKVIIVNPANIRCLGVQSPIKTT
FT                   CSIMPSMPELQKRLSQL"
XX
SQ   Sequence 2628 BP; 673 A; 557 C; 602 G; 796 T; 0 other;
     actggatggc cgaccgtttt ttggagtcct gcctttacgc atggggcgct cctttcctgg        60
     tcattacatt agggaccacc aaatgttgat aacgacatca gaccaatcag attgtttctg       120
     gcgcgtctat ttaccaatga cttgttaacc aagtggctat aaaggaaggc gagttgtcat       180
     gtcatgtcag ctttaattca aaatggtgaa gcgcgatgct ccatggcgga tgatggcggg       240
     gaccgcaaag gtatctcgat ctgcgaatta ttctccgcgt gcaggtttgg gccccaaatt       300
     tgacaaggcc catgcctggg taaaccggcc tatgtacaga aagcccagga tctaccggac       360
     gttgagaggt gccgacgttc ccaaaggatg tgaaggccct tgtaaggttc agtcttacga       420
     acagcgtcat gatatttctc atgttgggaa ggttatgtgc atttctgacg ttactcgtgg       480
     taacggtatt actcatcgtg ttggtaaacg tttttgtgtt aagtctgtat atattatagg       540
     taaggtttgg atggacgata acatcaagtt gaagaaccac accaatagcg ttatgttttg       600
     gttagtcaga gatcggcgac cgtatggcac ccccatggaa tttgggcaag tgttcaacat       660
     gtacgataac gagcctagta ctgcaacgat caagaacgat ctgcgtgatc gttttcaagt       720
     catgcatcgg ttttattcta aggtgaccgg gggacaatat gcgagcaacg agcaagctct       780
     cgtccggcgt ttttggaagg ttaacaacta cgtcgtctac aatcatcagg aagccgctaa       840
     atacgagaat cataccgaga atgctttgtt attgtatatg gcatgtactc atgcttctaa       900
     ccctgtgtat gcgacattga aaattcggat ctatttttac gattcgataa caaattaata       960
     aaacttgaat tttattacat gattctcaag tacatctgtt acatattttc tgtttgtggc      1020
     gaaacgaaca gcccttacaa cattattcag accgataacc cctaacatgt tcaagtaatg      1080
     cattacaaca tgtttaaacc tatttaaata agtcgtccca gaagctgtca gtgaagtcgt      1140
     ccagatttgg aagttgagaa aagcttggtg tagatccagt gccttcctca agttgtggtt      1200
     gaacctgatt tgtatgtggt aaattctggt tcttgtgtat atcggttgtt cgacgtggta      1260
     tattttgaaa aacaggggat ttggaaccgt ccagataaaa acggaattct ctgcctgata      1320
     gacagtgatg ctctcccccg tgcgtgaatc cattttctgc gcaggcaata tgtacgaaaa      1380
     ttgaacagcc gcagtttagg tcaatgcgcc ttctacgaac gcccttcttc ttggctattc      1440
     tgtgcttcgt cttgatagag gggggcgttg aggaagacga agttagcatt ttttaacgtc      1500
     cacgctctta gagatgcatt ttcctctttg tcaagaaatg ctttataact ggccccatcc      1560
     cctggattgc acagcacgat tgatgggatg ccgcctttaa ttttaaccgg ctttccgtac      1620
     ttacagttgg attgccagtc tctttgggcc ccaatcaatt ctttccaatg ctttaacttt      1680
     agatattgcg gtccaacgtc atcgatgacg ttatacatca cattattaga gtaaacccta      1740
     gcattgaagt cgagatgacc acttaaataa ttatgcggac ctatagcacg agcccacatt      1800
     gtcttgcccg tacgactatc accctctatg attatacttc taggtcttac cggccccgca      1860
     ggggtcatac aagcggcccg cgcagcggtt acattctcat cgacccagtc tttcatctct      1920
     tgtggaacgt tgttgaacga cgacaactga aatggaggaa cccatggatc ctcatccttt      1980
     tggaagaggc gctcgatgtt ggctttaaca ttatgataat ttacaacaaa tgtttttgga      2040
     tcacccgctt ttataattgc gagagcctct tctgcagttc cggcattgat ggcattatgg      2100
     aacacgtcgt ctttattgga ctttgtaccc ccagacacct tatattcgcc ggattcacaa      2160
     taatcacctt ctttggtgat gtaattcttg acggcgttgg agtctttggc tgcctgaatg      2220
     tttgggtgaa aacaggcaga ccttctgggg tgagtaaggt cgaaaaatct tgcattcttg      2280
     atgttcgact ttccggataa ctgtatgaga cagtgtaggt gtggagagcc gtcggagtgt      2340
     tcctctcttg cgactctgat atatttcggt ttgacaactg tccatgccag ttcttgaagc      2400
     atcttaagag cttcatcctt tgggatgtcg cactgaggat atgttaagaa aatgtttttt      2460
     gctgcgaccc gaaatgattt aggacttcta ggcatatttg aagaataagt ggagacacca      2520
     gcggagtccg cttctaaaac ctattgttta tggtgtcttg gtgtctcata tatactataa      2580
     ctcataaagg gtcttatagg ggtaaaatcg gccatccaca ataatatt                   2628
//