ID   HM160518; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   HM160518;
XX
DT   28-MAY-2012 (Rel. 112, Created)
DT   28-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Citrus tristeza virus isolate Knockalva11 coat protein gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Fisher L.C., Tennant P.F., McLaughlin W.A.;
RT   "Molecular characterization of the coat protein gene of some biological
RT   Jamaican Citrus tristeza virus isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-672
RA   Fisher L.C., Tennant P.F., McLaughlin W.A.;
RT   ;
RL   Submitted (28-APR-2010) to the INSDC.
RL   Life Sciences, University of the West Indies, Mona Campus, 2 St. John's
RL   Close, Kingston 7 0, Jamaica
XX
DR   MD5; 275e2667715842649d164cabf96d659d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sp."
FT                   /strain="severe"
FT                   /isolate="Knockalva11"
FT                   /mol_type="genomic RNA"
FT                   /country="Jamaica"
FT                   /collection_date="Mar-2007"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:I3NR92"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:I3NR92"
FT                   /protein_id="AEG77351.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDATGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCQTESQFELWRTS
FT                   ARRRIPVGNRHHVCGFLDWSWFDDLECAVYIQAKEQLLKKRGADEVVVPILRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 195 A; 128 C; 169 G; 180 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga aggcgacgat        60
     gttgtagctg ccgagtcttc tttcggttcc gtaaacttac acatcgatcc gactttgata       120
     acgatgaacg atgtgcgtca gttgggcacc caacagaacg ctgctttgaa cagagactta       180
     ttccttactt tgaaagggaa gtatcctaac ttacctgata aagataagga ctttcacata       240
     gctatgatgt tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacgcc       300
     acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgtctgataa actttggact       360
     gacgtcgtgt ttaactctaa gggtattggt aaccgtacta acgcccttcg agtttggggt       420
     agaactaacg atgcccttta cttagctttt tgccagacag aatcgcaatt tgagttatgg       480
     cggacgtccg ctagacgcag gattccggtc gggaatcgtc accacgtgtg cggatttctt       540
     gactggagct ggtttgacga tttagaatgt gctgtgtaca tacaagctaa agaacaatta       600
     ttgaagaagc gaggggctga tgaagtcgta gttcctattc tcaggcagct tgggaaattt       660
     aacacacgtt ga                                                           672
//