ID   HM160500; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   HM160500;
XX
DT   28-MAY-2012 (Rel. 112, Created)
DT   28-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Citrus tristeza virus isolate Linstead5 coat protein gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Fisher L.C., Tennant P.F., McLaughlin W.A.;
RT   "Molecular characterization of the coat protein gene of some biological
RT   Jamaican Citrus tristeza virus isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-672
RA   Fisher L.C., Tennant P.F., McLaughlin W.A.;
RT   ;
RL   Submitted (28-APR-2010) to the INSDC.
RL   Life Sciences, University of the West Indies, Mona Campus, 2 St. John's
RL   Close, Kingston 7 0, Jamaica
XX
DR   MD5; d3032dc3931bf82e7365af241137960b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sp."
FT                   /strain="severe"
FT                   /isolate="Linstead5"
FT                   /mol_type="genomic RNA"
FT                   /country="Jamaica"
FT                   /collection_date="Mar-2007"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:I3NR74"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:I3NR74"
FT                   /protein_id="AEG77333.1"
FT                   /translation="MDDETKKLKNKNKEAKEGDDVVAAESSFGSVNLHIDPTLITMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVLGRTSDDLYLAFCRQNRNLSYGRTS
FT                   ARRRDSGRVSLLVCVFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 197 A; 122 C; 170 G; 183 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaacaagg aagcgaaaga aggcgacgat        60
     gttgtagctg ccgagtcttc tttcggttcc gtaaacttac acatcgatcc gactttgata       120
     acgatgaacg atgtgcgtca gttgggcacc caacagaacg ctgctttgaa cagagactta       180
     ttccttactt tgaaagggaa gtatcctaac ttacctgata aagataagga ctttcacata       240
     gctatgatgt tataccgatt agcggttaag agttcatcat tgcaaagtga tgatgacacc       300
     acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgataa actttggact       360
     gacgtcgtgt ttaactctaa gggtattggt aaccgtacta acgcccttcg agttttgggt       420
     agaactagcg atgaccttta cttagctttt tgcagacaga atcgcaattt gagttatggg       480
     cggacgtccg ctagacgcag ggattccggc cgggtatcat tacttgtgtg cgtatttttg       540
     actggagctg gtttgactga cttagaatgt gctgtgtaca tacaagctaa agaacaatta       600
     ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct tgggaaattt       660
     aacacacgtt ga                                                           672
//