ID HM159454; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC HM159454; XX DT 07-SEP-2010 (Rel. 106, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus-Severe segment DNA A, complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus-Severe OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Rai N.K., Prasad M.; RT "ToLCV variability-the genomic sequences are diverse in nature"; RL Unpublished. XX RN [2] RP 1-2739 RA Rai N.K., Prasad M.; RT ; RL Submitted (28-APR-2010) to the INSDC. RL National Institute of Plant Genome Research, Aruna Asaf Ali Road, New RL Delhi, Delhi 110067, India XX DR MD5; 414a15103e697631cdec2d68c9688662. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Tomato leaf curl New Delhi virus-Severe" FT /segment="DNA A" FT /host="Solanum lycopersicum" FT /isolate="New Delhi" FT /mol_type="genomic DNA" FT /country="India" FT /db_xref="taxon:223351" FT CDS 41..427 FT /codon_start=1 FT /product="AV3" FT /note="associated with symptom development" FT /db_xref="UniProtKB/TrEMBL:E0YTP5" FT /protein_id="ADM36024.1" FT /translation="MKFTLHGLFIAWGSINRLAHQVWIHKHVGSIIARISRKRSWSKVH FT ASCKISPRDRKELFTRHSRLRSYSRSHSCSPSKELWRSDQQISSFQRPHRRYADVSTST FT APMELVQLSPLPASQKQRPGPTGR" FT CDS 120..458 FT /codon_start=1 FT /product="AV2" FT /db_xref="GOA:E0YTP6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E0YTP6" FT /protein_id="ADM36025.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLIRDL FT ILVLRAKNYGEATSRYHHFNARIEGTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQADEQ FT KTQNVQNV" FT CDS 280..1050 FT /codon_start=1 FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:E0YTP7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:E0YTP7" FT /protein_id="ADM36026.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASKVLSLVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(310..795) FT /codon_start=1 FT /product="AC5" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:E0YTP8" FT /protein_id="ADM36027.1" FT /translation="MHVLHRCCARFIVKHIKHFPEILGRSCRTTVTNQKKHDTVSMVFC FT LDVFIHPYLSQHIDGFHTESLPYAMCESSSSGNITNTHDFANMRDIVPRFKGLHLTRAF FT TAPWHVGTSIHSVHSGFSVHRPVGPGLCFCDAGNGDNCTSSIGAVEVETSAYLRCGR" FT CDS complement(1047..1457) FT /codon_start=1 FT /product="AC3" FT /db_xref="GOA:E0YTQ0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E0YTQ0" FT /protein_id="ADM36029.1" FT /translation="MITDSRTGEYITADRAESGVYTWEIRNPLYFKILQHDSRPFLTQH FT DIIKVQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGI FT CNVIRAVYHVLDNVLERTIDVWTSYDIKLDIY" FT CDS complement(1177..1596) FT /codon_start=1 FT /product="AC2" FT /db_xref="GOA:E0YTQ1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E0YTQ1" FT /protein_id="ADM36030.1" FT /translation="MQSSSHSKNHSIPVAKTSLPQKKKKSIRRRRVDLPCGCSYYISIN FT CHDHGFTHRGIHHCGSSREWRIYLGNSKSPVFQNFATRQQALPNTARHNQGSNTIQPQP FT AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNPGP" FT CDS complement(1499..2584) FT /codon_start=1 FT /product="AC1" FT /note="replication-associated protein" FT /db_xref="GOA:E0YTQ2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E0YTQ2" FT /protein_id="ADM36031.1" FT /translation="MASPRRFRVNAKNYFLTYPKCSLTKEEALSQLQTLETPTRKKFIK FT ICRELHEDGSPHIHVLIQFEGKYQCKNNRFFDLVSPTRSAHFHPNIQGAKSASDVKKYI FT DKDGDVLEWGVFQIDGRKKRGGQQTANDAYAQAINTGNKDDALRVLKELAPKDYVLQFH FT NLNTNLDRIFQPPSEVYVSPFSISSFDRVPAELVDWVSSNVVCAAARPFRPISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPPEEEEEHSQEAS" FT CDS complement(2251..2427) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E0YTP9" FT /protein_id="ADM36028.1" FT /translation="MGLRISMFSSNSKGNTSAKITDSSTWFPQLGQHISIRTFRELNQR FT RTSRNTSTKMETF" XX SQ Sequence 2739 BP; 741 A; 594 C; 604 G; 800 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg ccctcaaccc atgaaattca cgctacatgg 60 cctatttatt gcgtggggtt caataaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtctaagg tgcatgctag 180 ctgtaaaata tctccaagag atagaaaaga actattcacc agacacagtc ggctacgatc 240 ttattcgaga tctcattctt gttctccgag caaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaggta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaaggggc 480 tgtgaaggcc cttgtaaggt gcagtccttt gaatctaggc acgatgtctc tcatattggc 540 aaagtcatgt gtgttagtga tgttacccga ggaactggac tcacacatcg cgtagggaag 600 cgattctgtg tgaaatccgt ctatgtgctg ggaaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttt tttctggttc gtgaccgtcg tcctacagga 720 tctccccagg atttcgggga agtgtttaat atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtgttacgga agtggcatgc gactgtgacg 840 ggaggaacat atgcatctaa ggtcctatca ttagttagga agtttgttag ggttaataat 900 tatgttgttt ataatcaaca agaggccggc aagtatgaga atcatactga aaacgcatta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctactttt atgattcggt cacaaattaa taaatatcca gttttatatc atacgaagtc 1080 catacatcaa ttgttcgctc taatacatta tccaatacat gataaactgc tcttattaca 1140 ttacaaattc ctatgacacc taacatatcc aggtacttaa ggacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaatt gtatttgaac cttgattatg 1320 tcgtgctgtg ttaggaaggg cctgctgtcg tgttgcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatccg cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatgtaatac gaacaaccac acggcagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctggggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcttcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcattttt ttcttcatcc agatattcct tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgaccggctt tccgtacttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaaatgctt tagatagtgg ggatcgacgt 1800 catcaatgac gttgtaccag gcatcattgc tatatacctt tgggctcaga tcaagatgtc 1860 cacacaagta attgtgtggt cctaagcatc gagcccacat tgttttgccc gtcctactat 1920 ccccctctat gactatgctt atgggcctaa aaggccgcgc agcggcacac acaacattag 1980 acgagaccca atcgacgagt tctgccggaa ctctgtcgaa ggatgaaatt gaaaatggag 2040 aaacataaac ctcggaagga ggttgaaaaa tacgatctaa attggtattt aaattgtgaa 2100 actgcagaac gtaatccttt ggggctaatt cctttaatac tctcaaagca tcgtctttat 2160 ttcccgtgtt aatcgcctgg gcatatgcat cgtttgccgt ttgttgacca ccacgcttct 2220 ttcgtccatc gatctggaaa acaccccatt ctagaacgtc tccatctttg tcgatgtatt 2280 tcttgacgtc cgacgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgag 2340 ttggggaaac caagtcgaag aatctgttat ttttgcactg gtatttccct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct cgtgaagctc tctacatatc ttgatgaatt 2460 tcttcctcgt cggagtttct agggtttgca attgggaaag tgcctcttct ttagttagag 2520 agcactttgg atatgtgagg aaatagtttt tggcatttac tctaaaacga cgtggcgaag 2580 ccataaaact tgtcgttttg attcggcgtc cctcaactta tctatgtgat tggtgtctgg 2640 agtcctatat ataggtaaga caccatatgg cattattgta attttggaaa gaaaattact 2700 ttaattcaaa ttccctaaag cggccattcg tataatatt 2739 //