ID HM153767; SV 3; linear; genomic RNA; STD; VRL; 7588 BP. XX AC HM153767; XX DT 01-MAY-2011 (Rel. 108, Created) DT 22-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Ovine hungarovirus OHUV1/2009/HUN, complete genome. XX KW . XX OS Ovine hungarovirus OHUV1/2009/HUN OC Viruses; Riboviria; Picornavirales; Picornaviridae; Hunnivirus. XX RN [1] RP 1-7588 RX PUBMED; 23015712. RA Reuter G., Pankovics P., Knowles N.J., Boros A.; RT "Two closely related novel picornaviruses in cattle and sheep in hungary RT from 2008 to 2009, proposed as members of a new genus in the family RT picornaviridae"; RL J. Virol. 86(24):13295-13302(2012). XX RN [2] RP 1-7588 RA Reuter G.; RT ; RL Submitted (26-APR-2010) to the INSDC. RL Regional Laboratory of Virology, ANTSZ Baranya County Institute of State RL Public Health Service, Szabadsag u. 7., Pecs H-7623, Hungary XX RN [3] RC Sequence update by submitter RP 1-7588 RA Reuter G.; RT ; RL Submitted (29-MAR-2012) to the INSDC. RL Regional Laboratory of Virology, ANTSZ Baranya County Institute of State RL Public Health Service, Szabadsag u. 7., Pecs H-7623, Hungary XX RN [4] RC Sequence update by submitter RP 1-7588 RA Reuter G.; RT ; RL Submitted (17-SEP-2012) to the INSDC. RL Regional Laboratory of Virology, ANTSZ Baranya County Institute of State RL Public Health Service, Szabadsag u. 7., Pecs H-7623, Hungary XX DR MD5; 9d0b77605496ae02a44a6dee4d903578. DR EuropePMC; PMC3503094; 23015712. DR EuropePMC; PMC4403396; 25631076. DR EuropePMC; PMC5041129; 27682620. XX CC On Sep 17, 2012 this sequence version replaced gi:403397246. XX FH Key Location/Qualifiers FH FT source 1..7588 FT /organism="Ovine hungarovirus OHUV1/2009/HUN" FT /host="Ovis aries (domestic sheep)" FT /strain="OHUV1/2009/HUN" FT /mol_type="genomic RNA" FT /country="Hungary" FT /isolation_source="fecal sample" FT /collection_date="2009" FT /db_xref="taxon:1168173" FT 5'UTR 1..715 FT CDS 716..7474 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:F4YYF3" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR015031" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="InterPro:IPR037080" FT /db_xref="UniProtKB/TrEMBL:F4YYF3" FT /protein_id="ADO85550.2" FT /translation="MVTITSVQSGNIIVVYSQSFYQNHTHNGSSWQANPTTVNMEVAIL FT DFDLSCDIWSEESDFDFDVEQTMLLSGQTPEEFFFEFEGPGQSKQESGNTNNSGNHGVI FT NYNFYNQQWQNSVDLEHAMENNATAYGGTGGGDSQHNSNRTENLLLSGLQAATTILPLL FT ADGLTEDFENSDRVNKTQAGATTLVTQHHVGCMTYPGRKSGPSPSSAADEPTMAGPSVN FT RFITIPVGNWTSSKTVYSGWCLPLPWTPLTCNTPFGFSARRHFACLNCGWHVQVQVNST FT RFHGGALGVFLVPQFVYQGQNSLAGPHELAETDYPQFNKQQLFLFPHQILNPRTNSSVD FT IQVPYANCTPGCDPTQQAPWTLLIVVISPLSYAQGATTSLEVVASIRPLETEFHGIRQT FT NAEFEGLPKNRNESSAYAFCSTQPHSAEPDYGAMCRSSPAFLPAEITDFLQISQIPTLT FT AIRAVSFQQAVPRNALMTMNVSLTATDLLNTSLETVSRGFAQYRGSILIRMLYTGNQMQ FT NVRFVAAYTPPGADPPENLQQAMDGIYTIFDTGLNAGNDFVIPFISTTDYRYCNAPGGI FT EVGSGGYFTIWQLTTLAVPPGSPPTAELLIFAATGRDFEWRCVSSPYLLLEGEDSQVTP FT AETGQTPDVTAENSNQETVPIPYCPRKISHSAVRFWYDRFFLADAISVGVKGSAATVVA FT LTWPDILRRVPEIQHFMHATYCRFELEIAMRPWNQDDVDYEMVFWPPGSFIPGEYDDWG FT ATAARRMRRTGPLPRWTWNSKRTPCFTTRIPFTSPASVLTQTYTGWNNTTHTAENFGTT FT PGLNTLGSLTITQGASSGTRSVLTYVSYRFVDIQLWCPRPGMAIDPPAQSSGATNFSLL FT RLAGDVELNPGPSVLSIARKFDKDLDGMFSKFEQMQESLKKITDFANWIDVFNNVDKKK FT WFKRIIKFLSYGVILSRARHDPLLAAATAFLLSGDWLTKLCVKMCKWLCDHAETKPPPL FT PSSGDDPDEGTSDGKIKKKKEKQDNVFTDVPEFLKAFQKLENKPLSINSGDITRKTDDV FT PLIDLNNLGPKIDYPGENNPFGESLADKLARDNERLIKQAQEEYARRCANPFEESDAEP FT EKFLDKFKRFFNKTPKLEGPILQEMNQVLVLCRNAQWFAKQIQKVLDWLGIWKQQEEDA FT SEEKFREKMKLYPKMMEKYEQYKNSPRHNCWTECKKWFDDMRRLAVLHDPKLVNLFPNM FT ASIPHENSRQEPILIVLRGKPGQGKSVAASMLAQMFAHSLSGKPDYYSYNSSTNYFDGY FT QQQPVVLIDDLGQDPAGTDFSVFCQMISTTPFLPNMASLNDKGIKFKSDIIIATTNLPE FT FKPVTIADPGALQRRINFDFEVEAGQSYKTRNGTLDLAKALEPTGCSAPLHMVKSDIHL FT FSSACLKFKDRTARCECSLVEVYDRVMNSHKRRNDLANRLVEIFNFQGPRRDHDPRNYV FT ETYPIPVPRKKDVEKWCDLAIAQEPHDDEVLSFLRKHCDHAIFGAYLRRFYGAGPDPTK FT PPSNFNLRRALDMMSIITQVLALLLMIMSIGIVIWQIFSLEGAYSGNAVVREKKKPNGL FT KVIDIASLQGPMNFDLEKSLLARNIVTVRCRRRDGSIFETGGLAIRGRVVVINYHLWND FT SEYLQLDGEWMHRDQVPAIRPAANGMPTELVFMNWAHTPGRQFRDITNYFPRGGEGHFK FT LSPAAKITGICGHMQPGFMFTAESLGTAESARTWETVIPMVLKYKAQTAPGFCGSVIVV FT DNGIWKKVFGLHCAGAHGVGMAAIISREMLDAVATLAEFQGRIHSAKDHPYIYTPHRTQ FT LYPTVACNDETTVEPAALSPNDKRLQRPEEFKRTILAKHVGDRTDGPTAMLRGSRHKVR FT LVRAKCGPVNERLSLHEAVFGTDNLDPMDQTRSPGWPYIGSKRRPELLWQTDNGLELDP FT VLRAELMLMMEGDFSNHIFVTFLKDELRDKEKVKQGKTRVIDIASYGHAIMGRVLFGRL FT AAAMHAHNGVELGSAVGTNPDIDWTRYAAEFKFKNFVDVDYSGFDATHSSFSFHCLKVF FT LKELGFDEIALKYVDSLCDSTHIWDDEIFQITGGLPSGCSCTSIFNTIINNIVVRSLVP FT EVYDGEFQMLAYGDDLVLCSQDTFSVEKYKEILEEVTNYRITPASKTGTFEWTGLSGVV FT FLKRYFYQDGLLVRPVMTYKNLHNILSWARAGTVQEKLNSVARLAQHRGEQDYNKLMEP FT FVDCGYVVPSFDDLEFEFFSLFFG" FT mat_peptide 716..964 FT /product="L-protein" FT mat_peptide 965..1207 FT /product="VP4" FT /note="capsid" FT mat_peptide 1208..1927 FT /product="VP2" FT /note="capsid" FT mat_peptide 1928..2596 FT /product="VP3" FT /note="capsid" FT mat_peptide 2597..3298 FT /product="VP1" FT /note="capsid" FT mat_peptide 3299..3361 FT /product="2A" FT mat_peptide 3362..4090 FT /product="2B" FT mat_peptide 4091..5062 FT /product="2C" FT mat_peptide 5063..5398 FT /product="3A" FT mat_peptide 5399..5479 FT /product="3B" FT mat_peptide 5480..6103 FT /product="3C" FT mat_peptide 6104..7471 FT /product="3D" FT /note="RNA-dependent RNA polymerase" FT 3'UTR 7475..7588 XX SQ Sequence 7588 BP; 2111 A; 1715 C; 1780 G; 1982 T; 0 other; tctttccccc ctcccctttc cctttacctc ttgcaacgaa acagtttttg acaaggaccc 60 tcacctgtca atcgggacca ccactttcag tgaccccgtg cgaagtgttg agagaaagtg 120 agctttctta cccttcattt gtgaaccctt cagtcgaagc cgcttggaat aagatggaag 180 gaaatgttca ttctaaatgg agtgaaacat atacttaatt tccagtgttt agtggtcttt 240 ccactagaca acggcactgt cttgccggaa ctctacacac caacattcca cgcttgtggg 300 actcaaatgt tggatgacac agttgtagct ggaactgagt gtttagtgca ctctgtgtaa 360 cagtgaaaac aatgtgatca cttcggtggg ctagtagcct gtggactaac aactggtaac 420 agttgcctca ggggccaaaa gccacggtgt taacagcacc ctactagttt gattggagca 480 atccatgatg ttacagagtt agtaactgcc aaacagattg tactggtatc ttggcatacc 540 gtgcaactta ggatagtgaa ggatgccctg gcggtaccca taggtaacaa gtgacactat 600 ggatctaaac aggggctcac tctacgttgc tttacaacta gctgtgagtt aaaaaacgtc 660 taactatcca caacctaggg gactaggttt tcctttttat ttttatacac aactaatggt 720 gacaataact tctgtacaat caggtaatat tattgttgtc tattcacaga gcttttacca 780 gaaccacaca cataacggat cttcttggca agcaaatcca acaacagtca atatggaggt 840 tgcaatcttg gattttgatc tgtcttgtga catctggagt gaggaatccg actttgattt 900 tgatgttgag cagactatgc ttctctctgg tcagacgcca gaagaatttt tctttgagtt 960 tgaaggacct ggacagagta agcaagaatc tggaaacacc aataactctg gcaaccatgg 1020 cgtgatcaat tacaattttt acaaccaaca gtggcagaat tcggttgatc tggaacacgc 1080 catggagaac aatgccacag cttatggtgg aactggaggc ggtgattccc aacataattc 1140 aaaccgcact gagaacttgc ttctctccgg cctgcaagca gccaccacca tcctgcccct 1200 cctagccgat ggattgactg aggactttga aaactcagac agggttaaca aaacccaagc 1260 aggtgccaca acacttgtaa cacagcacca tgttgggtgt atgacatacc caggtcgcaa 1320 gtcagggcct tccccctcca gcgcagcaga tgagcctacc atggcgggac cctcagtgaa 1380 caggttcata accataccag ttggcaattg gacaagttca aagactgtgt attctggatg 1440 gtgcctgccc cttccgtgga cgccgctcac ttgcaataca ccttttggat tttcggcacg 1500 ccgccacttt gcatgtttaa actgtggttg gcatgtgcaa gtgcaagtga acagcacacg 1560 cttccacggt ggggctctgg gtgtgttctt agtgccccag tttgtgtacc aaggtcaaaa 1620 ctcactagcc ggaccacacg aacttgcaga aactgactat ccccagttca ataaacaaca 1680 gttatttctc tttccacacc aaattctgaa ccctagaaca aattcttcag ttgatataca 1740 agttccatat gcaaattgca caccaggttg cgaccccacg cagcaagcgc catggacact 1800 tttgatagta gttatctccc ctctgtcata tgcccagggc gccactactt cattggaggt 1860 tgtggcctca attagaccac tggagacaga gttccatggg atcaggcaga ccaatgctga 1920 gtttgagggg ctgcccaaaa acaggaacga aagttcagca tatgccttct gctccacaca 1980 accacatagt gctgagccag actatggtgc catgtgtcgc tcttcaccag ctttcctgcc 2040 tgctgaaata actgactttc tccaaatttc ccagattcca actcttacag caattagggc 2100 agtctctttt cagcaggcag ttccaagaaa tgcactcatg acaatgaatg tgtctttaac 2160 agcaacagat ctgcttaata caagcctcga aacagtttct cggggctttg cacaataccg 2220 tggaagcatt ttaatcagaa tgctttacac tggtaatcag atgcagaatg tcagattcgt 2280 ggcagcatac acaccacctg gtgctgaccc accagagaac ttgcaacagg caatggatgg 2340 gatttacaca atatttgaca caggacttaa tgctggaaat gattttgtga tcccatttat 2400 ttctaccaca gactacaggt actgtaatgc acctggagga attgaagttg gtagtggtgg 2460 gtattttacc atttggcagc tcaccacact tgcagtcccc cctggatcac cccccactgc 2520 tgagcttttg atctttgctg ccacaggaag agattttgag tggcgttgtg tgtcaagccc 2580 ctaccttcta ttggaaggtg aagattcaca agtcacgccc gctgagacgg ggcagacgcc 2640 agatgtaaca gcagaaaact ccaatcaaga aactgttccc attccctatt gcccacggaa 2700 aatttcgcac agcgccgtgc gattctggta tgacaggttc ttccttgccg acgctattag 2760 cgttggtgtc aaagggagtg ctgctacggt tgtagctctg acatggcctg acatacttag 2820 acgggtacca gaaatacagc attttatgca cgccacatac tgcagatttg aattggagat 2880 agcaatgagg ccctggaatc aagatgatgt tgattatgaa atggttttct ggccgcccgg 2940 gtctttcata ccaggtgaat atgatgactg gggtgcaact gcggcacggc gtatgcgccg 3000 cacagggccc ctcccacggt ggacttggaa ttcgaagaga acgccgtgtt ttacaaccag 3060 aatccctttc acctcacctg cttcagtttt gacacagaca tatactggat ggaacaatac 3120 aacacataca gcagaaaact ttgggaccac tcccggcctt aacacattgg gttctctgac 3180 aattacacag ggagcttcta gtggcacccg ctctgtgcta acatatgtat cttacagatt 3240 tgtagacatc caattatggt gccccagacc aggcatggca attgacccac cggcgcagtc 3300 tagtggtgcc accaattttt cactgctaag actagctgga gatgttgagc tgaaccctgg 3360 cccttctgtt ctcagcattg ctaggaaatt tgacaaggat ttggatggaa tgttctctaa 3420 atttgagcaa atgcaagaaa gtttgaagaa aattacagat tttgccaact ggattgatgt 3480 ttttaacaat gtggataaga agaaatggtt taaaaggata atcaaatttc tttcctatgg 3540 tgtgattctt tctcgtgccc gccatgatcc tcttcttgct gctgctactg ctttccttct 3600 ttctggtgat tggcttacta aactttgtgt taaaatgtgc aagtggttgt gtgaccatgc 3660 agagacaaag cccccacccc tccccagctc aggtgatgac cccgatgagg gaacctcgga 3720 cgggaaaatt aagaagaaga aggagaaaca ggacaatgtg tttactgatg tgcccgagtt 3780 tctgaaggct tttcagaagc ttgagaacaa accactctca attaattctg gtgacatcac 3840 caggaagaca gatgatgtac ccttgattga tttgaacaac cttggaccaa agattgacta 3900 cccaggtgag aacaatccat ttggggaatc cctagctgac aaactggcta gagacaatga 3960 gagactcatc aaacaggcac aagaagaata tgcccggagg tgtgcaaacc ccttcgagga 4020 gtcagatgct gaacctgaaa aattcttgga taaattcaag agattcttca ataagacccc 4080 aaaactggaa ggaccaattt tacaggaaat gaaccaggta cttgtactgt gcaggaatgc 4140 acagtggttt gctaaacaga ttcaaaaagt gcttgactgg cttggaattt ggaaacaaca 4200 ggaagaagat gcctctgaag agaaattcag agagaagatg aaactgtacc ccaaaatgat 4260 ggagaagtat gaacaataca agaactctcc cagacataac tgctggacag aatgtaagaa 4320 atggtttgat gatatgcgcc ggctggccgt gctgcatgat ccaaaacttg tcaacctttt 4380 cccaaatatg gcaagcatac cacatgaaaa ctctaggcag gaaccaattt tgatcgtgct 4440 aagaggcaag cctggacagg gcaaatctgt tgccgccagc atgttggcac aaatgtttgc 4500 acacagtctt tcagggaaac cagactatta cagttacaat tcatccacca actattttga 4560 tggctaccag caacaaccag ttgtgttgat tgatgatctt ggacaggacc cggctggaac 4620 agatttttca gtgttttgcc agatgatttc aacaacacca ttcttaccca acatggcaag 4680 tcttaatgac aaaggcatta agtttaagag tgacatcata attgcaacta ccaacttgcc 4740 agaattcaag cctgttacaa ttgcagaccc tggagctctc cagagaagaa tcaactttga 4800 ctttgaagtg gaagcaggac agtcttacaa gaccaggaat ggtactttgg atctggctaa 4860 ggcacttgaa cccactggat gctcggcccc gttgcatatg gtgaagtcag atatacatct 4920 tttctccagt gcatgcttga aatttaagga tagaaccgcc agatgtgaat gcagcctggt 4980 agaagtgtat gacagagtga tgaactcaca caagagaaga aatgacctgg ctaacagatt 5040 ggttgaaatt ttcaacttcc aaggacccag gagagatcat gaccctagga attatgttga 5100 gacctaccca atcccagtgc ctaggaagaa ggacgttgag aagtggtgtg accttgcaat 5160 cgcacaagag ccacatgatg atgaggttct cagttttttg aggaaacact gtgaccatgc 5220 catctttgga gcctacctgc gtaggttcta tggagctgga ccagacccca ccaagccacc 5280 cagcaatttc aacttgagga gagccttgga tatgatgtcc attatcacac aggttttggc 5340 actgctgctc atgattatga gcattggaat tgtgatttgg caaattttct ctttggaggg 5400 cgcctacagt ggcaatgctg ttgtgcgtga aaagaagaaa ccaaatggac tcaaggtaat 5460 tgacattgct tcgttacaag gaccaatgaa ctttgaccta gagaagtcat tacttgcccg 5520 caacattgtg accgtgcgat gtaggcggag ggatggcagc atcttcgaaa cgggtggcct 5580 agctatccgt ggaagagtag ttgtcatcaa ttaccatctc tggaatgact cagaatattt 5640 gcaacttgat ggagaatgga tgcatagaga ccaagtacct gccattcggc ccgctgccaa 5700 tggcatgcca acagaactgg ttttcatgaa ctgggcgcac accccaggga gacaattcag 5760 agacataaca aattacttcc cacgtggagg tgaaggacac ttcaagctga gcccagcagc 5820 aaagataact gggatttgtg gacatatgca gcccggcttt atgtttacag cagagagctt 5880 agggaccgct gaatctgcca ggacatggga gacagtgatt cctatggtac tgaagtacaa 5940 agcccaaaca gcaccagggt tttgtggcag tgtcattgta gttgacaatg gcatttggaa 6000 gaaagtattt ggactgcatt gtgctggagc acacggagtt ggcatggcag ccatcatttc 6060 gcgagagatg cttgatgccg tcgctaccct tgctgagttc caggggcgca tccacagcgc 6120 caaggaccac ccttacatct acacacctca caggacacag ttgtacccca ctgttgcttg 6180 caatgatgaa acaactgttg aacctgcagc gctcagcccc aatgataaga ggctgcagag 6240 acctgaggaa tttaagagaa ccattctggc aaagcatgtt ggagatcgca ctgatggacc 6300 aactgcaatg cttagaggct cgcgccacaa ggtcaggctg gtgcgggcta agtgtggccc 6360 tgtgaatgaa cgactgtcgc tgcacgaggc agtctttgga acagacaatc ttgaccccat 6420 ggatcagaca aggtcaccag gttggcccta catagggtcg aaaaggaggc cagaacttct 6480 ttggcaaact gacaatggat tggaactgga tccggtgctg cgtgccgaac tgatgctcat 6540 gatggaaggt gatttctcca accacatatt tgtgaccttc ctcaaggatg agctcaggga 6600 caaagaaaaa gtgaaacaag gtaagacaag agtgattgac atcgcttcat atggtcatgc 6660 cattatgggg cgcgtgctat ttggccggct ggccgcagca atgcatgcac acaacggtgt 6720 cgagcttggc tccgctgttg gtactaatcc agacattgat tggaccagat atgctgcaga 6780 atttaagttc aagaattttg ttgatgtgga ctattctgga tttgatgcaa cccattcctc 6840 tttctctttt cattgcctaa aagtgttctt aaaagaattg ggttttgatg aaattgcctt 6900 gaaatatgtg gattcccttt gtgattcaac ccatatttgg gatgatgaga tttttcagat 6960 aactggaggt cttccaagtg gatgtagttg cactagcatt ttcaacacca taatcaacaa 7020 cattgtggtg cgctcactgg tgcctgaagt gtatgatggc gagtttcaga tgcttgccta 7080 tggtgatgac cttgtgcttt gttcccagga taccttttca gttgaaaaat ataaggaaat 7140 tttggaggaa gtgaccaatt atagaattac accagcttca aagacaggaa cttttgaatg 7200 gactgggctg tctggagtag tgtttttaaa acgctatttc tatcaggatg gattgcttgt 7260 tcgcccagtg atgacataca aaaacctgca caacatactc tcatgggccc gtgctggcac 7320 ggttcaggag aagttgaact ctgttgcccg gctggcgcaa catcgtggag agcaggatta 7380 caacaagctg atggagccgt ttgttgattg cggctacgtg gttcctagct ttgatgacct 7440 tgaatttgag ttcttttctc ttttctttgg ttgaattcgg ttatgggttt ttctgttttg 7500 gttctaagat tgagagcaaa gattgattgg ttttgattaa tgtgatttca gttttagtaa 7560 attagggtta attttcccca gagtaatc 7588 //