ID HM140367; SV 1; circular; genomic DNA; STD; VRL; 2736 BP. XX AC HM140367; XX DT 19-NOV-2010 (Rel. 106, Created) DT 04-JUL-2012 (Rel. 113, Last updated, Version 3) XX DE Papaya leaf crumple virus-Panipat 8 [India:Panipat:Papaya:2008], complete DE genome. XX KW . XX OS Papaya leaf crumple virus-Panipat 8 [India:Panipat:Papaya:2008] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2736 RX PUBMED; 22437254. RA Singh-Pant P., Pant P., Mukherjee S.K., Mazumdar-Leighton S.; RT "Spatial and temporal diversity of begomoviral complexes in papayas with RT leaf curl disease"; RL Arch. Virol. 157(7):1217-1232(2012). XX RN [2] RP 1-2736 RA Singh P., Mukherjee S.K., Mazumdar-Leighton S.; RT ; RL Submitted (21-APR-2010) to the INSDC. RL Botany, Delhi University, Chattra Marg, New Delhi, Delhi 110007, India XX DR MD5; 72db5d085f7cf43ea381de5bd1bcdc20. DR EuropePMC; PMC5142593. XX FH Key Location/Qualifiers FH FT source 1..2736 FT /organism="Papaya leaf crumple virus-Panipat 8 FT [India:Panipat:Papaya:2008]" FT /segment="DNA-A" FT /host="Carica papaya" FT /isolate="Panipat 8 [IN:Pani:Pap:08]" FT /mol_type="genomic DNA" FT /country="India:Haryana" FT /isolation_source="leaf" FT /collection_date="Apr-2008" FT /db_xref="taxon:913600" FT gene 120..485 FT /gene="AV2" FT CDS 120..485 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /note="pre-coat protein" FT /db_xref="GOA:E5F1K8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E5F1K8" FT /protein_id="ADQ13205.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYHHFNARLEGTPPSQLRQPICEPRCCPHCPRHKSKGLDQQAHEP FT KAQDVQDVQEPRCSKGL" FT gene complement(258..548) FT /gene="AC5" FT CDS complement(258..548) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="GOA:E5F1K9" FT /db_xref="UniProtKB/TrEMBL:E5F1K9" FT /protein_id="ADQ13211.1" FT /translation="MTFPMCWISCLDSNDWTLHGPSQPLGTSGLLYILYILGFRFMGLL FT VQALAFVTRTMGAAARLAYGLSKLRRRRTFEAGVEMMISAGRFDIIPSPNN" FT gene 280..1050 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /note="coat protein; encapsidation/insect transmission" FT /db_xref="GOA:E5F1L0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E5F1L0" FT /protein_id="ADQ13206.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGIGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGLYAPKEQALVKKFIRVNNYVVYNYQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1047..1451) FT /gene="AC3" FT CDS complement(1047..1451) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /note="replication enhancer protein" FT /db_xref="GOA:E5F1L1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E5F1L1" FT /protein_id="ADQ13207.1" FT /translation="MDSRTGESITAGHAMNGVYIWETPNPLYFKITEHHNRPFLMKEDI FT ISVQIQFNHNLRKRLGIMNCFLGLRIHTRLHLQTWHFLRVFKTQVLRYLDSLGVISINN FT CIKAFRHVLYDVLEGTINVIEDHDIKFNIY" FT gene complement(1192..1599) FT /gene="AC2" FT CDS complement(1192..1599) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /note="transcription activator protein" FT /db_xref="GOA:E5F1L2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E5F1L2" FT /protein_id="ADQ13208.1" FT /translation="MQHSSPSQSHCTQVPIKVQHRLAKRRAFRRKRVDLECGCSYYVHI FT NCHNHGFTHRGIHHCRSCNEWRVYLGNPKSPLFQDNRTPQQAVPNEGRHHLRSDTIQSQ FT PQEETGDNELFLGLEDPHSFTSSDLAFLKSL" FT gene complement(1523..2587) FT /gene="AC1" FT CDS complement(1523..2587) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /note="replication associated protein" FT /db_xref="GOA:E5F1L3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E5F1L3" FT /protein_id="ADQ13209.1" FT /translation="MAPPKRFQIYAKNFFLTYPKCSLTKEEALTQLQNLQTPVNKKYIK FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYM FT EKDGDTLDWGEFQIDGRSARGGQQSANDAYAKAINTGSKSEALRVIRELAPKDYVLQFH FT NLNANLDRIFAPPMEVYVSPFLSSSFDQVPEAIEEWASENVMGPAARPLRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSRKIYSNDAWYNIIDDVDPHYLKHFKEFMGVQRDW FT QSNTKYGKPVQIKGGIPTIFLCNSGPNSCYREYLDEEKNSALRSWAIHNATFITLTEPL FT YSGTHQGPTQASQA" FT gene complement(2128..2430) FT /gene="AC4" FT CDS complement(2128..2430) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E5F1L4" FT /protein_id="ADQ13210.1" FT /translation="MGNLIFTCSSSSKENTSAKITGSSTWYPQPGQHISIRTFRELSQA FT QMSSPIWRRMETPSTGESFRSMDDLQEGDNSQPMMLTPKQLIQAVSQRLLESLGN" XX SQ Sequence 2736 BP; 728 A; 566 C; 641 G; 801 T; 0 other; accggatggc cgcgcaaatt tttaggtggg ccctcaacca atgaaattca cgctacatgg 60 cctatttagt gcggggggac caataaatag acttgctcac caagtttgta tctacaaaca 120 tgtgggaccc actattgaat gagtttccag aaactgttca tgggtttagg tgcatgttgg 180 cagtgaaata cctccagcta gtagaaaata cgtattcccc agacactctg ggatacgatt 240 taattaggga tttaatttca gttattaggg ctcggaatta tgtcgaagcg accagcagat 300 atcatcattt caacgcccgc ctcgaaggta cgccgccgtc tcaacttcga cagcccatat 360 gcgagccgcg ctgctgcccc cattgtccgc gtcacaaaag caagggcctg gaccaacagg 420 cccatgaacc gaaagcccag gatgtacagg atgtacagga gcccagatgt tccaaggggc 480 tgtgaaggcc cgtgtaaggt ccagtcattt gagtccagac atgatatcca gcacattggg 540 aaagtcatgt gtgttagtga tgttactcgt ggtattgggc tgacccacag ggttggcaag 600 aggttctgtg tgaagtccgt ctatgtattg ggcaagattt ggatggatga gaacatcaag 660 actaagaatc atacgaatag tgttatgttt ttccttgtta gggatcgtag gcctgttgac 720 aagcctcaag attttggtga ggtttttaac atgtttgata atgagcccag cacggcgact 780 gtgaagaatg ttcatcgtga cagatatcag gtgttaagga agtggcatgc cactgtgaca 840 ggcggtttat acgcaccgaa ggagcaggct ctcgtgaaga agtttattag ggtcaataat 900 tatgttgtgt acaactacca agaggctggc aagtatgaga atcatactga gaatgcattg 960 atgttgtata tggcgtgtac gcacgcctct aaccccgtgt atgccacttt gaagatacgg 1020 atctacttct atgattcagt atcgaattaa taaatattga attttatatc atgatcctca 1080 attacattaa ttgtgccctc aagtacatca tataatacat gtctgaaagc cttaatacaa 1140 ttatttatac taattacgcc taaactatct aaatatctta aaacttgagt cttaaagact 1200 cttaagaaat gccaagtctg aagatgtaaa cgagtgtgga tcctcaagcc caagaaacaa 1260 ttcattatcc ccagtctctt cctgaggttg tgattgaatt gtatctgaac ggagatgatg 1320 tcttccttca ttaggaacgg cctgttgtgg tgttctgtta tcttgaaata gaggggattt 1380 ggggtttccc agatatacac gccattcatt gcatgacctg cagtgatgga ttcccctgtg 1440 cgtgaatcca tggttgtggc agttgatgtg tacgtagtat gagcagccac actcgaggtc 1500 aaccctctta cgccggaagg ctctacgctt ggctagcctg tgttggacct tgatgggtac 1560 ctgagtacag tggctctgtg agggtgatga atgttgcatt atgtatagcc cacgacctca 1620 gtgctgagtt cttttcctca tcgaggtatt ctctatagca ggaattgggc ccagaattgc 1680 agaggaagat agtgggaata cctcctttaa tttgaactgg tttcccgtac ttggtgttac 1740 tttgccagtc cctctggacc cccatgaact ctttaaaatg ctttaggtag tgggggtcta 1800 cgtcatcaat gatgttatac catgcatcat ttgaatatat cttgcgactc agatctaaat 1860 gtccacacag gtaattgtgt ggtcccaaag acctggccca cattgtcttg cccgtacgac 1920 tatcaccctc aatgacgata cttttaggtc tcaatggccg cgcagcggga cccatcacat 1980 tttcagaggc ccattcctct atggcctctg gaacttgatc gaaggaagat gaaagaaaag 2040 gggaaacata aacctccatt ggaggtgcaa aaatcctatc taaattagca ttaagattat 2100 gaaattgtaa gacataatcc tttggggcta attccctaat gactctaaga gcctctgact 2160 tactgcctgt attaattgct ttggcgtaag catcattggc tgactgttgt ccccctcttg 2220 cagatcgtcc atcgatctga aactctcccc agtcgagggt gtctccatcc ttctccatat 2280 aggacttgac atctgagctt gacttagctc cctgaatgtt cggatggaaa tgtgctgacc 2340 tggttgggga taccaggtcg aagaacctgt tattttggca cttgtatttt ccttcgaact 2400 ggatgagcac gtgaagatga ggttccccat tttcgtggag ctctctgcag atttttatgt 2460 attttttatt tactggggtt tgtaggttct gaagttgggt gagtgcctct tctttagtaa 2520 gagagcattt tggataagtg agaaagaaat ttttggcata tatttgaaaa cgcttgggag 2580 gagccattga cttggtcaat cggtactcag cactagtcct atggcaattg gtgatcagta 2640 ctcaatatat agtgagtacc aaatggcaga attgtaattt ggaaaagaaa attactttaa 2700 ttcaaattcc cataaagcgg ccatccgtat aatatt 2736 //