ID   HM125567; SV 1; linear; genomic RNA; STD; VRL; 1132 BP.
XX
AC   HM125567;
XX
DT   01-MAY-2011 (Rel. 108, Created)
DT   01-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Rice ragged stunt virus isolate SX segment 9, complete sequence.
XX
KW   .
XX
OS   Rice ragged stunt virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus.
XX
RN   [1]
RP   1-1132
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   "Phylogenetic evidence for origin and evolution of rice rigged stunt
RT   virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1132
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   ;
RL   Submitted (15-APR-2010) to the INSDC.
RL   Institute of Plant Virology, Fujian Agricultural and Forestry University,
RL   Fuzhou, Fujian 350002, P.R. China
XX
DR   MD5; 329ecfbd577b09ad1913ccbc7f53ca0f.
XX
CC   GenBank Accession Numbers HM125559-HM125568 represent sequences
CC   from the 10 segments of Rice ragged stunt virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1132
FT                   /organism="Rice ragged stunt virus"
FT                   /segment="9"
FT                   /host="rice"
FT                   /isolate="SX"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Shaxian, Fujian province"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:42475"
FT   CDS             14..1030
FT                   /codon_start=1
FT                   /product="spike protein"
FT                   /note="RRSVs9gp1; P9"
FT                   /db_xref="UniProtKB/TrEMBL:F4YTV4"
FT                   /protein_id="AEC32909.1"
FT                   /translation="MKTAFARDPFTAPATGTYGTIYASRSLPRLSISKFLEDANPEIYE
FT                   LSRYEALGTNRPSSGKRAMQPAVSKPALLETVFTLDIWYRRTNNQNIGNLRDSVSRFLS
FT                   DDRVREAVMVRLDLDIVVQLKEYWLIVKDKEAQTFADRLAFDSHLFVNRGENANYDLVT
FT                   QMFIPSDTFLKDNFKTEALKKLLLSVQSHTGLDAGLQGDSSKATYNIGLGQYLEDEALL
FT                   YRQGVALQQMAFAELELARGAEKEAFPSTFDLSNRPACNLILKRTCKWYQQTFKAEERK
FT                   EFAKSLWVDDFAEANWNTGNLSFGFSTTLNVIERWRLTRFYVHMYSSVHIYSQKASG"
XX
SQ   Sequence 1132 BP; 341 A; 237 C; 263 G; 291 T; 0 other;
     gataaatctc gccatgaaga ctgcctttgc cagagatcct tttacagctc ctgctacagg        60
     tacgtacgga accatatatg cctccagatc attaccccga ctctctatct ccaaattctt       120
     agaagatgca aatccagaaa tttatgaact atcgagatat gaagcacttg gaaccaacag       180
     acccagctca ggaaagcgag cgatgcaacc agctgtcagt aaaccggctt tacttgagac       240
     cgtattcaca ctcgatatat ggtacagaag gacgaacaac cagaacatcg gcaatttgag       300
     agattcagtg tctcgatttc tatctgacga tcgagtgagg gaagcggtga tggtacgact       360
     agatttagac attgttgtcc agctaaaaga gtactggtta atagttaaag ataaggaagc       420
     ccagactttc gcggaccgat tggcctttga ctcacatcta tttgttaatc gtggcgaaaa       480
     tgcgaattac gatcttgtaa ctcagatgtt cattccgagt gatacttttc ttaaggataa       540
     ctttaaaaca gaagcactta agaagttgtt actaagtgtc caaagccata caggactaga       600
     cgctggatta caaggtgata gttcaaaagc gacttacaac attggcctag gacaatatct       660
     cgaggatgag gccctcctgt accgtcaagg tgtggctcta caacagatgg ctttcgcaga       720
     gttggagtta gctagaggag cagagaaaga ggcgtttcca tcaacctttg atctaagcaa       780
     tagaccggct tgcaacctga tccttaagcg aacgtgtaaa tggtatcaac agacgtttaa       840
     agctgaggag agaaaagaat ttgcgaagag tttgtgggta gacgactttg ccgaggctaa       900
     ttggaacaca ggtaacttat ctttcggctt ctcaactaca ttaaacgtaa ttgaaagatg       960
     gcgtttaact agattttatg ttcatatgta ctcatctgtg catatatatt ctcagaaggc      1020
     ctcggggtag gaaacgctgg ggatcaaggt gaattgaaat gaggacttct caccctcatg      1080
     gacattcggc ctcttcacgg gtggcgcccc gaaaactgcg agaccatggt gc              1132
//