ID   HM125566; SV 1; linear; genomic RNA; STD; VRL; 1913 BP.
XX
AC   HM125566;
XX
DT   01-MAY-2011 (Rel. 108, Created)
DT   01-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Rice ragged stunt virus isolate SX segment 8, complete sequence.
XX
KW   .
XX
OS   Rice ragged stunt virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus.
XX
RN   [1]
RP   1-1913
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   "Phylogenetic evidence for origin and evolution of rice rigged stunt
RT   virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1913
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   ;
RL   Submitted (15-APR-2010) to the INSDC.
RL   Institute of Plant Virology, Fujian Agricultural and Forestry University,
RL   Fuzhou, Fujian 350002, P.R. China
XX
DR   MD5; c7fd19885e40687a4a5a25580123b57e.
XX
CC   GenBank Accession Numbers HM125559-HM125568 represent sequences
CC   from the 10 segments of Rice ragged stunt virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1913
FT                   /organism="Rice ragged stunt virus"
FT                   /segment="8"
FT                   /host="rice"
FT                   /isolate="SX"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Shaxian, Fujian province"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:42475"
FT   CDS             23..1813
FT                   /codon_start=1
FT                   /product="structural protein"
FT                   /note="RRSVs8gp1; P8"
FT                   /db_xref="UniProtKB/TrEMBL:F4YTV3"
FT                   /protein_id="AEC32908.1"
FT                   /translation="MNTKGFAQKIQRTFHLIHQSHYTPPPNKVSTHVEIFSELLTYIDY
FT                   EWQRAAIGASRWVELAVEENEIHIPFNTKDERQVNFLIAIIHVAISLYSNSGVEPFADC
FT                   DLEKILNGDYENSKFDWNVVFDIVLPNDVRLKEKTLKAAVVEEERVEPRPKRREITLGG
FT                   QRPLQTRDVRSDSDLIVLSKLEAYDDVVERTRQNNTDIIIHRLGLAKMNPASNSILPAK
FT                   ISRVITEQVFGAGVNVDYIARPTEGFMSLSTATYTVASYFERGIANYDINAILDNIIDK
FT                   TDQLNTTDTVVELPSIPPEDSSIEVATPSHEMFFDINTMIYIIMCRGSITNPMIQRLNG
FT                   IVTRYNTTNYVVNYPDTDDGRKKALAERAVITVDGKYYKCYNDIKADTDKRRILNPAVI
FT                   KEVMISLRHYCGSVIHYRERMEATHISQVFCLLMGICYGGLDTKKIRCRWFEWPAVSNV
FT                   PVTSSYAEFKGSNSGLPPYQCRKFTPRTVMTSFAHWNLWAWMLDLAIDKRMSSDRHLSI
FT                   MKIYVLNAFSHLVLNSSLENSANILGPFPSFSGYTAFTSTSIVRDVSSCQRLAPFLLRM
FT                   FSLVDYVAAAASSEASGSGV"
XX
SQ   Sequence 1913 BP; 534 A; 396 C; 445 G; 538 T; 0 other;
     gataaatctc ccaggaccaa gcatgaatac caagggcttc gcgcagaaga tccagagaac        60
     cttccacttg attcaccaga gtcattacac acctccaccg aacaaagtat ctacccatgt       120
     cgaaattttc tcagaactgt taacatacat tgattatgaa tggcagaggg cggcaatcgg       180
     tgcttcacga tgggttgaat tagctgttga ggaaaatgaa atccacatcc cttttaatac       240
     caaggacgag cgacaggtca acttcttaat cgccatcatc cacgtagcca tctcactgta       300
     ttcaaactca ggagtagaac ctttcgctga ttgtgattta gagaaaattc tgaatggcga       360
     ctatgaaaat agtaaatttg attggaatgt agtgttcgac attgttttgc ctaatgatgt       420
     aagattgaaa gaaaagacac ttaaagcagc ggtagttgag gaggaacgtg ttgaacctcg       480
     tccaaagcgg agagagataa cgcttggagg acagcggcct ttacagacta gggatgtgcg       540
     ttcagattcg gatttgattg ttttgagcaa gcttgaggcg tatgatgatg ttgttgaaag       600
     aacaaggcag aataacaccg acattatcat ccatcgactt ggtttagcta aaatgaatcc       660
     cgcaagtaat tctatcctac cggccaaaat ctcccgagtt atcactgaac aagtatttgg       720
     agctggagtg aacgtcgatt atattgccag accgactgaa ggatttatgt ctctgtcgac       780
     cgccacttac acagtagctt cttactttga gcggggtatc gctaattatg acatcaatgc       840
     catcttggac aacatcatcg ataagaccga ccaactaaac acaaccgata ccgttgttga       900
     attaccatcc attccgccag aggactcgtc aattgaagtg gcgacgccgt cgcatgagat       960
     gttctttgat atcaacacca tgatatatat cataatgtgc cgtggaagca tcactaatcc      1020
     tatgatccag cgtctaaacg gtatcgtcac cagatacaac acgaccaatt atgtggtgaa      1080
     ttatcctgat actgacgatg gaaggaagaa ggcattggct gagcgtgcgg ttattactgt      1140
     ggacggtaag tattataagt gttataatga tatcaaggct gacacagata agcgaagaat      1200
     tcttaacccg gctgtcatta aagaggttat gattagtctg cgtcattatt gtggtagtgt      1260
     cattcactat agagagcgga tggaagcaac tcatattagt caagtgttct gccttcttat      1320
     gggaatatgc tacggtggtt tagataccaa gaagatcagg tgtcgatggt tcgagtggcc      1380
     cgccgtgtca aacgttccag ttacttctag ttacgcggag tttaaaggta gtaatagtgg      1440
     tctgccgcct taccaatgtc gtaaattcac accacgaacg gttatgacat ctttcgctca      1500
     ttggaatttg tgggcgtgga tgcttgattt agcaattgac aaacgcatgt cgtcagatcg      1560
     ccatcttagt attatgaaga tttacgtttt gaacgctttt agtcatctag ttcttaattc      1620
     ctcgttagaa aatagtgcta acatcttggg tccttttccg tcattttcag gctacaccgc      1680
     ctttacgtct acatctatag ttcgtgatgt ttcttcgtgt caacgcctag ctccgttcct      1740
     actccgcatg tttagtctag ttgattacgt cgcagcagca gcgagctcag aagctagtgg      1800
     ttccggtgta tgagagagag ggttgcttta ggtgagacgg cttagcattg cctcatgaac      1860
     ttggtcacct gagtggctct caggctggca ctgggcagag atagaatggg tgc             1913
//