ID   HM125557; SV 1; linear; genomic RNA; STD; VRL; 1132 BP.
XX
AC   HM125557;
XX
DT   01-MAY-2011 (Rel. 108, Created)
DT   01-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Rice ragged stunt virus isolate GD segment 9, complete sequence.
XX
KW   .
XX
OS   Rice ragged stunt virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus.
XX
RN   [1]
RP   1-1132
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   "Phylogenetic evidence for origin and evolution of rice rigged stunt
RT   virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1132
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   ;
RL   Submitted (15-APR-2010) to the INSDC.
RL   Institute of Plant Virology, Fujian Agricultural and Forestry University,
RL   Fuzhou, Fujian 350002, P.R. China
XX
DR   MD5; 5142a3190fd857b6b56ebb95389034b3.
XX
CC   GenBank Accession Numbers HM125549-HM125558 represent sequences
CC   from the 10 segments of Rice ragged stunt virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1132
FT                   /organism="Rice ragged stunt virus"
FT                   /segment="9"
FT                   /host="rice"
FT                   /isolate="GD"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Xinyi, Guangdong province"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:42475"
FT   CDS             14..1030
FT                   /codon_start=1
FT                   /product="spike protein"
FT                   /note="RRSVs9gp1; P9"
FT                   /db_xref="UniProtKB/TrEMBL:Q89861"
FT                   /protein_id="AEC32899.1"
FT                   /translation="MKTAFARDPFTAPATGTYGTIYASRSLPRLSISKFLEDANPEIYE
FT                   LSRYEALGTNRPSSGKRAMQPAVSKPALLETVFTLDIWYRRTNNQNIGNLRDSVSRFLS
FT                   DDRVREAVMVRLDLDIVVQLKEYWLIVKDKEAQTFADRLAFDSHLFVNRGENANYDLVT
FT                   QTFIPSDAFLKDNFKTEALKKLLLSVQNHTGLDAGLQGDSSKATYNIGLGQYLEDEALL
FT                   YRQGVALQQMAFAELELARGAEKEAFPSTFDLSNRPACNLILKRTCKWYQQTFKAEERK
FT                   EFAKSLWVDDFAEANWNTGNLSFGFSTTLNVIERWRLTRFYVHMYSSVHIYSQKASG"
XX
SQ   Sequence 1132 BP; 332 A; 237 C; 273 G; 290 T; 0 other;
     gataaatctc gccatgaaga ctgcctttgc cagagatcct tttacagctc ctgctacagg        60
     tacgtacgga accatatatg cctccagatc attaccccga ctctctatct ctaagttctt       120
     ggaagatgca aatccagaaa tttatgaact atcgagatat gaagcgctcg gaaccaacag       180
     acccagctca gggaagcgag caatgcaacc agccgtcagt aaaccagctt tactggaaac       240
     cgtattcaca ctcgatatat ggtacagaag gacgaacaac cagaacatcg gcaatttaag       300
     agattcggta tctcgatttc tatctgatga tcgagtaaga gaagcggtga tggtgcgact       360
     agatttagac attgttgtcc agctaaaaga atactggttg atagttaaag acaaagaagc       420
     ccagactttc gcggaccgat tggcctttga ctcgcatcta tttgtcaatc gcggcgaaaa       480
     cgcgaattat gatcttgtaa ctcagacgtt cattccgagt gatgcttttc ttaaggataa       540
     ctttaagacg gaagcactta agaagttgtt gctaagtgtc caaaaccata cgggactaga       600
     cgctggattg caaggtgata gttcgaaagc gacttacaac attggcctag gacaatatct       660
     cgaggatgag gccctcctgt accgtcaagg tgtggctcta caacaaatgg cttttgcgga       720
     gttggaatta gctagaggag cagagaaaga ggcgtttcca tcaaccttcg atctaagcaa       780
     tagaccggct tgcaacttga tccttaagcg aacgtgtaag tggtatcaac aaacgtttaa       840
     ggctgaggag agaaaggaat ttgcgaagag tttgtgggtg gatgactttg ccgaggctaa       900
     ttggaacaca ggtaatttgt cttttggctt ttcaaccaca ttaaatgtaa ttgagagatg       960
     gcgtttgacc agattttatg ttcatatgta ctcatctgtg catatatatt ctcagaaggc      1020
     ctcggggtag gaaacgctgg ggatcaaggt gaattgaaat gaggacttct caccctcatg      1080
     gacattcggc ctcttcacgg gtggcacccc gaaaactgcg agaccatggt gc              1132
//