ID   HM125556; SV 1; linear; genomic RNA; STD; VRL; 1916 BP.
XX
AC   HM125556;
XX
DT   01-MAY-2011 (Rel. 108, Created)
DT   01-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Rice ragged stunt virus isolate GD segment 8, complete sequence.
XX
KW   .
XX
OS   Rice ragged stunt virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus.
XX
RN   [1]
RP   1-1916
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   "Phylogenetic evidence for origin and evolution of rice rigged stunt
RT   virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1916
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   ;
RL   Submitted (15-APR-2010) to the INSDC.
RL   Institute of Plant Virology, Fujian Agricultural and Forestry University,
RL   Fuzhou, Fujian 350002, P.R. China
XX
DR   MD5; e5590a344a71828745f08f1a967418fe.
XX
CC   GenBank Accession Numbers HM125549-HM125558 represent sequences
CC   from the 10 segments of Rice ragged stunt virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1916
FT                   /organism="Rice ragged stunt virus"
FT                   /segment="8"
FT                   /host="rice"
FT                   /isolate="GD"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Xinyi, Guangdong province"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:42475"
FT   CDS             26..1816
FT                   /codon_start=1
FT                   /product="structural protein"
FT                   /note="RRSVs8gp1; P8"
FT                   /db_xref="UniProtKB/TrEMBL:F4YTU3"
FT                   /protein_id="AEC32898.1"
FT                   /translation="MNTKGFAQKIQRTFHLIHQSHYTPPPNKISTHVEIFSELLTYVDY
FT                   EWQRAAIGASRWVELAVEENEIHIPFNTKDERQVNFLIAIIHVAISLYSNSGVEPFADC
FT                   DLEKILNGDYESSKFDWNVVFDIVLPNDVRLKEKTLKAAVVEEERVEPRPKRREITLGG
FT                   QRPLQTRDVRSDSDLIVLSKLEAYDDVVERTRQNNTDIIIHRLGLAKMNPASNSILPAK
FT                   ISRIITEQVFGAGVNVDYIARPTEGFISLSTATYTVASYFERGVANYDINAVLDNIIDK
FT                   TDQLNTTDTVVELPSIPPEDSSIEVATPSHETFFDINTMIYIIMCCGSITNPMIQRLNG
FT                   IVTRYNTTNYVVSYPDTDDGRKKALAERAVITVDGKYYKCYNDIKADTDKRRILNPAVI
FT                   KEVMISLRHYCGSVVHYRERMEATHISQVFCLLMGICYGGLDTKKIRCRWFEWPAVSNV
FT                   PVTSSYAEFKGSNSGLPPYQCRKFTPRTVMTSFAHWNLWAWMLDLAIDKRMSSDRHLSI
FT                   MKIYVLNAFSHLVLNSSLENSANILGPFPSFSGYTAFTSTSIVRDVSSCQRLAPFLLRM
FT                   FSLVDYVAAAASSEASGSGV"
XX
SQ   Sequence 1916 BP; 527 A; 406 C; 457 G; 526 T; 0 other;
     gattataaac ctcccaggac caagcatgaa taccaagggc ttcgcgcaga agatccagag        60
     aaccttccac ttgattcacc agagtcacta cacacctcca ccaaacaaaa tatctaccca       120
     tgttgaaatt ttctcagaac tgctaacata cgttgactat gaatggcaga gggcagcgat       180
     cggcgcttca cgatgggttg agttagctgt tgaggaaaac gaaatacaca tcccttttaa       240
     taccaaggac gagcgacagg tcaacttctt aatcgccatt atccatgttg ctatttcgtt       300
     gtattcgaac tcaggagtag agcctttcgc tgattgtgat ctagagaaaa ttttgaatgg       360
     cgactatgag agtagtaagt tcgattggaa tgtggtgttc gacattgttt tgccaaatga       420
     tgtaagattg aaagaaaaga cgcttaaagc agcggtggtt gaggaagaac gtgttgaacc       480
     tcgtccaaaa cgtagagaga taacgcttgg aggacagagg cctttgcaga ctagggatgt       540
     gcgttcggat tctgatttga ttgttttgag caaacttgag gcgtatgatg atgttgttga       600
     aagaacgagg cagaataaca ccgacattat catccatcga cttggtttag ccaagatgaa       660
     tcctgcgagt aattcaatcc taccggccaa aatctcgcga atcatcactg aacaagtatt       720
     tggagctgga gtgaacgtcg attacattgc cagaccaact gaaggattta tatctctgtc       780
     gaccgccacc tacacggtag cttcttactt tgaacggggc gtcgccaatt atgacatcaa       840
     tgccgtcttg gacaacatca ttgataagac cgatcaactg aacacaaccg ataccgtcgt       900
     tgagctacca tccattccgc cagaggactc gtcgattgaa gtggcgacgc cgtcgcacga       960
     gacgttcttt gatatcaaca ccatgatata catcataatg tgctgtggaa gcatcaccaa      1020
     tcctatgatc cagcgcctaa acggtatcgt caccagatac aacacgacca attacgtggt      1080
     aagttatcct gatactgacg atggaaggaa gaaggcattg gctgagcgtg cggttatcac      1140
     tgtggacggt aagtactata agtgctacaa cgatatcaag gctgacacag ataagcgaag      1200
     aattctcaac ccagctgtca tcaaagaggt tatgattagt ctgcgtcact attgtggtag      1260
     tgtcgttcat tacagagaga ggatggaagc gactcatatt agtcaagtgt tttgtcttct      1320
     gatggggata tgctatggtg gcttagatac caagaagatc aggtgtcgat ggtttgagtg      1380
     gcccgccgtg tctaacgttc cagtcacttc tagttacgca gagtttaaag gcagtaacag      1440
     tggtctgcca ccttaccaat gtcgcaaatt cacaccacga acggttatga catcttttgc      1500
     gcattggaat ttatgggcgt ggatgcttga tttagcaatt gacaaacgca tgtcgtcaga      1560
     tcgtcatctt agtattatga agatttacgt tttgaacgct ttcagtcatt tagttcttaa      1620
     ttcctcatta gaaaatagcg ccaacatttt aggtcctttt ccatcgtttt cgggctacac      1680
     cgcttttaca tctacatcta tagttcgtga tgtttcttcg tgtcaacgtc tagctccgtt      1740
     cctactccgt atgtttagtt tagttgatta tgttgcggca gcagcgagtt cagaagccag      1800
     cggttccggt gtatgagaga gagggttgct ttaggtgaga cggcttagca ttgcctcatg      1860
     aacttggtca cctgagtggc tctcaggctg gcactgggca gagatagaat gggtgc          1916
//