ID   HM125546; SV 1; linear; genomic RNA; STD; VRL; 1913 BP.
XX
AC   HM125546;
XX
DT   01-MAY-2011 (Rel. 108, Created)
DT   01-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Rice ragged stunt virus isolate CT segment 8, complete sequence.
XX
KW   .
XX
OS   Rice ragged stunt virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus.
XX
RN   [1]
RP   1-1913
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   "Phylogenetic evidence for origin and evolution of rice rigged stunt
RT   virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1913
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   ;
RL   Submitted (15-APR-2010) to the INSDC.
RL   Institute of Plant Virology, Fujian Agricultural and Forestry University,
RL   Fuzhou, Fujian 350002, P.R. China
XX
DR   MD5; 671ee656ba967d641a07ccddece32fe3.
DR   EuropePMC; PMC4466780; 26073458.
DR   EuropePMC; PMC5549333; 28789694.
XX
CC   GenBank Accession Numbers HM125539-HM125548 represent sequences
CC   from the 10 segments of Rice ragged stunt virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1913
FT                   /organism="Rice ragged stunt virus"
FT                   /segment="8"
FT                   /host="rice"
FT                   /isolate="CT"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Changting, Fujian province"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:42475"
FT   CDS             23..1813
FT                   /codon_start=1
FT                   /product="structural protein"
FT                   /note="RRSVs8gp1; P8"
FT                   /db_xref="UniProtKB/TrEMBL:F4YTT3"
FT                   /protein_id="AEC32888.1"
FT                   /translation="MNTKGFAQKIQRTFHLIHQSHYTPPPNKISTHVEIFSELLTYVDY
FT                   EWQRAAIGASRWVELAVEENEIHIPFNTKDERQVNFLIAIIHVAISLYSNSGVEPFADC
FT                   DLEKILNGDYESSKFDWNVVFDIVLPNDVRLKEKTLKAAVVEEERVEPRPKRREITLGG
FT                   QRPLQTRDVRSDSDLIVLSKLEAYDDVVERTRQNNTDIIIHRLGLAKMNPASNSILPAK
FT                   ISRIITEQVFGAGVNVDYIARPTEGFISLSTATYTVASYFERGIANYDINAVLDNIIDK
FT                   TDQLNTTDTVVELPSIPPEDSSIEVATPSHETFFDINTMIYIIMCCGSITNPMIQRLNG
FT                   IVTRYNTTNYVVSYPDTDDGRKKALAERAVITVDGKYYKCYNDIKADTDKRRILNPAVI
FT                   KEVMISLRHYCGSVIHYRERMEATHISQVFCLLMGICYGGLDTKKIRCRWFEWPAVSNV
FT                   PVTSSYAEFKGSNSGLPPYQCRKFTPRTVMTSFAHWNLWAWMLDLAIDKRMSSDRHLSI
FT                   MKIYVLNAFSHLVLNSSLENSANILGPFPSFSGYTAFTSTSIVRDVSSCQRLAPFLLRM
FT                   FSLVDYVAAAASSEASGSGV"
XX
SQ   Sequence 1913 BP; 535 A; 402 C; 449 G; 527 T; 0 other;
     gataaatctc ccaggaccaa gcatgaatac caagggcttc gcgcagaaga tccagagaac        60
     cttccacttg attcaccaga gtcactacac acctccacca aacaaaatat ctacccatgt       120
     tgaaattttc tcagaactgc taacatacgt tgactatgaa tggcagaggg cagcgatcgg       180
     cgcttcacga tgggttgagt tagctgttga ggaaaacgaa atacacatcc cttttaatac       240
     caaggacgag cgacaggtca acttcttaat cgccattatc catgttgcta tttcgttgta       300
     ttcgaactca ggagtagagc ctttcgctga ttgtgatcta gagaaaattt tgaatggcga       360
     ctatgagagt agtaagttcg attggaatgt ggtgttcgac attgttttgc caaatgatgt       420
     aagattgaaa gaaaagacgc ttaaagcagc ggtggttgag gaagaacgtg ttgaacctcg       480
     tccaaaacgt agagagataa cgcttggagg acagaggcct ttgcaaacta gggatgtgcg       540
     ttcggattct gatttgattg ttttgagcaa acttgaggcg tatgatgatg ttgttgaaag       600
     aacaaggcag aataacaccg acattatcat ccatcgactt ggtttagcca agatgaatcc       660
     tgcgagtaat tcaatcctac cggccaaaat ctcgcgaatc atcactgaac aagtatttgg       720
     agctggagtg aacgtcgatt acattgccag accaactgaa ggatttatat ctctgtcgac       780
     cgccacttac acagtagctt cttactttga acggggcatc gccaattatg acatcaatgc       840
     cgtcttggac aacatcattg ataagaccga tcaactgaat acaaccgata ccgtcgttga       900
     gctaccatcc attccgccag aggactcgtc aattgaagtg gcgacgccgt cgcacgagac       960
     gttctttgat atcaacacca tgatatacat cataatgtgc tgtggaagca tcactaatcc      1020
     tatgatccag cgcctaaacg gtatcgtcac cagatacaac acgaccaatt acgtggtaag      1080
     ttatcctgat actgacgatg gaaggaagaa ggcattggct gagcgtgcgg ttatcactgt      1140
     ggacggtaag tactataagt gctacaacga tatcaaggct gacacagata agcgaagaat      1200
     tctcaaccca gctgtcatca aagaggttat gattagtctg cgtcactatt gtggtagtgt      1260
     cattcattac agagagagga tggaagcgac tcatattagt caagtgtttt gtcttctgat      1320
     gggaatatgc tatggtggct tagataccaa gaagatcagg tgtcgatggt ttgagtggcc      1380
     cgccgtatct aacgttccag ttacttctag ttacgcagag tttaaaggca gtaacagtgg      1440
     tctgccacct taccaatgtc gcaaattcac accacgaacg gttatgacat cttttgcgca      1500
     ttggaattta tgggcgtgga tgcttgattt agcaattgac aaacgcatgt cgtcagatcg      1560
     tcatcttagt attatgaaga tttacgtttt gaacgctttc agtcatttag ttcttaattc      1620
     ctcattagaa aatagcgcca acattttagg tccttttcca tcgttttcgg gctacaccgc      1680
     ttttacatct acatctatag ttcgtgatgt ttcttcgtgt caacgtctag ctccgttcct      1740
     actccgcatg tttagtttag ttgattatgt cgcggcagca gcgagttcag aagccagcgg      1800
     ttcaggtgta tgagagagag ggttgcttta ggtgagacgg cttagcattg cctcatgaac      1860
     ttggtcacct gagtggctct caggctggca ctgggcagag atagaatggg tgc             1913
//