ID   HM125545; SV 1; linear; genomic RNA; STD; VRL; 1938 BP.
XX
AC   HM125545;
XX
DT   01-MAY-2011 (Rel. 108, Created)
DT   01-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Rice ragged stunt virus isolate CT segment 7, complete sequence.
XX
KW   .
XX
OS   Rice ragged stunt virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus.
XX
RN   [1]
RP   1-1938
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   "Phylogenetic evidence for origin and evolution of rice rigged stunt
RT   virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1938
RA   Chen Q., Wu M.A., Wu Z.J., Xie L.H.;
RT   ;
RL   Submitted (15-APR-2010) to the INSDC.
RL   Institute of Plant Virology, Fujian Agricultural and Forestry University,
RL   Fuzhou, Fujian 350002, P.R. China
XX
DR   MD5; 695fbf6337c8528529cda1ba0212d162.
XX
CC   GenBank Accession Numbers HM125539-HM125548 represent sequences
CC   from the 10 segments of Rice ragged stunt virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1938
FT                   /organism="Rice ragged stunt virus"
FT                   /segment="7"
FT                   /host="rice"
FT                   /isolate="CT"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Changting, Fujian province"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:42475"
FT   CDS             20..1846
FT                   /codon_start=1
FT                   /product="non-structural protein"
FT                   /note="RRSVs7gp1; Pns7"
FT                   /db_xref="UniProtKB/TrEMBL:F4YTT2"
FT                   /protein_id="AEC32887.1"
FT                   /translation="MDELTLSIGGSPGKLAGTQLLYKQKIDKEIRLSPTDLLFSSNTVD
FT                   HKLRNKRTTIALLSREVQARLGKWMISFADQKGTAADFGLQLAKWVQASTQLHYYVHPA
FT                   DMSALRAADQSLIRQLPRVTVEVCKTKKVSQTDPIEHKYQSRPGMIEGGVTITPRQAVT
FT                   LEEIYPLASRPEKGVIMFMLSQAHLERLIHPVIKQVSNYFTCVKVGTSGFSLNYNHPYI
FT                   RAMFLEPITACDVVELPLQALHARFSAGKGHLYLCGDGHAPRTLTCAQMFDIPHVHDFT
FT                   MPSVTVVSFYAPEQHIAIARYASWYEKDTICRLLQSTLPDVEKLVWLCAMSYPIFPSLR
FT                   PTLTGSIFSRCKVVVSVSAERSRLLSDGLPKWAEWVDNVLSDRIAKPACLILIGPKASS
FT                   KSFVTRQLVAKLNASSLSVEGDNFGRVDSDAFGKWVTMMVSNSTLPTSWAQFDLMQNDK
FT                   EIASYVDIRFNDICVKHGFCELDDLRTKNAGVLQGEFARSFIEIIKDPSCGLRAFFSWL
FT                   FGLYGLPRGLMLESHTNVEIAEYPPTTCILQLLPNYDVMSVLLERDARKGISKLAEMQM
FT                   EEYYNGLRIGTYRSVLACELLRVAEVGPPVEG"
XX
SQ   Sequence 1938 BP; 535 A; 400 C; 466 G; 537 T; 0 other;
     gataaatctc ccagtcgaaa tggacgagct aactttatcc attggaggtt caccaggaaa        60
     acttgcagga actcaactgc tctacaaaca gaaaattgac aaagaaatca ggctttcgcc       120
     aacagatctt ctcttctcct cgaacactgt tgaccataag ctgcgcaaca aacgtaccac       180
     catcgcctta ctcagtcgag aagttcaagc cagacttgga aagtggatga tatcatttgc       240
     tgatcagaaa ggtacggcag ctgattttgg attacaattg gcgaaatggg ttcaagcgtc       300
     aacacaattg cactactacg tacacccggc tgatatgagt gctcttcgag cggcagacca       360
     atccttaatc cgtcaacttc ctcgagttac agttgaggtg tgtaaaacaa agaaggtatc       420
     tcagactgac ccaattgaac ataagtatca gagcagacca ggtatgatcg agggtggagt       480
     gacgattacg ccgagacaag ctgtgacgct agaagagatc tatccattgg ccagtcgtcc       540
     ggaaaaagga gttattatgt tcatgttgtc ccaagctcat ttggaacgtc taattcatcc       600
     agtgattaaa caagtctcga actatttcac atgcgttaaa gttggaacgt ctggcttcag       660
     tctgaattac aatcatccat acattagggc catgttcctt gagccaatca ctgcctgtga       720
     tgttgttgaa ttaccacttc aagcacttca tgctagattc agtgctggaa aagggcactt       780
     atacttatgc ggtgatggtc atgctccaag aacattgaca tgtgcacaga tgtttgatat       840
     tccccatgtc cacgatttta ctatgccttc agtgaccgtg gtctcatttt atgcgcccga       900
     gcaacacata gcaatagcca gatacgcatc ttggtatgag aaggatacca tttgtagatt       960
     gttgcagagt actcttcccg atgttgaaaa gttggtatgg ttgtgtgcta tgtcatatcc      1020
     aatctttcct tccctcaggc caacgttaac gggaagcatt ttctcgagat gtaaagttgt      1080
     tgtctcagta agcgcggagc gttcgaggtt attaagcgat ggtttgccaa aatgggcaga      1140
     atgggttgac aatgtgctga gtgataggat agctaaacct gcttgcttaa tattgattgg      1200
     ccccaaagcc agttccaaat cgtttgttac tcgccaatta gttgctaagt tgaacgcatc      1260
     gtcgttatct gttgaaggag ataattttgg acgtgtagat tcggacgctt ttgggaaatg      1320
     ggtaaccatg atggtatcga atagtacgct tccaacatct tgggcccaat ttgacttaat      1380
     gcaaaatgat aaggaaatag cctcctacgt cgacattagg ttcaacgaca tttgcgtgaa      1440
     acatggtttt tgtgaactcg acgatttacg gactaagaac gctggagtgc tgcaaggtga      1500
     gttcgctaga tcgtttattg agataattaa agatccgagt tgtggactgc gcgcgttctt      1560
     cagttggtta tttggtttgt acggtctacc gagaggtttg atgcttgaaa gtcacaccaa      1620
     tgttgagata gctgaatatc ccccaacaac atgtattttg caattgcttc caaattatga      1680
     cgttatgtca gttttgttgg aacgagatgc caggaaaggc attagtaagc tagctgagat      1740
     gcagatggag gagtactata acggtctaag aataggcact tacagatcgg tcctagcatg      1800
     cgagttactg cgggttgcag aggttgggcc tcccgtcgag ggatagtcgg acatttcact      1860
     agcgcgagct ccatactcaa cgcctagcca gcgggagtaa gttctagttt gttcacctgg      1920
     gggagacaga gaaggtgc                                                    1938
//