ID HM122238; SV 1; circular; genomic DNA; STD; VRL; 2762 BP. XX AC HM122238; XX DT 03-OCT-2010 (Rel. 106, Created) DT 03-OCT-2010 (Rel. 106, Last updated, Version 1) XX DE Digitaria didactyla striate mosaic virus strain DDSMV-[AU:QL:99], complete DE genome. XX KW . XX OS Digitaria didactyla striate mosaic virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2762 RX DOI; 10.1007/s00705-010-0759-0. RX PUBMED; 20652334. RA Briddon R.W., Martin D.P., Owor B.E., Donaldson L., Markham P.G., RA Greber R.S., Varsani A.; RT "A novel species of mastrevirus (family Geminiviridae) isolated from RT Digitaria didactyla grass from Australia"; RL Arch. Virol. 155(9):1529-1534(2010). XX RN [2] RP 1-2762 RA Varsani A., Briddon R.W., Martin D.P., Owor B.E., Donaldson L., RA Markham P.G., Shepherd D.N.; RT ; RL Submitted (15-APR-2010) to the INSDC. RL School of Biological Sciences, University of Canterbury, Ilam, Christchurch RL 8140, New Zealand XX DR MD5; d6a92e6642427f08cb0fee907d21bb37. XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="Digitaria didactyla striate mosaic virus" FT /host="Digitaria didactyla Willd" FT /strain="DDSMV-[AU:QL:99]" FT /mol_type="genomic DNA" FT /country="Australia" FT /collection_date="1999" FT /db_xref="taxon:889510" FT CDS 158..505 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:E2FER1" FT /db_xref="UniProtKB/TrEMBL:E2FER1" FT /protein_id="ADN93257.1" FT /translation="MATPTFDSAYFRSGSVVQNQDGTSFAFPVKVTALVCISSIVAAAI FT LVFLYKTCLQDCITQWRLTTYGSHFSSGFGGTHLVTSGQPESNHTPIVSLPDRSAVSVP FT PVSLPVGLQTS" FT CDS 502..1227 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:E2FER2" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:E2FER2" FT /protein_id="ADN93258.1" FT /translation="MSPAGSYKRKRSAASSSATPKRRRVYKQAVSRPLSRREPLQVQDF FT TWEQDSAFNAGGSAYLLTSYARGSAENQRKTAETITYKVAINLGVAISGTMQQYCVSSR FT PVCWLVYDAAPSGTAVTAQEIFGFPDGLKNWPTTWKVARSVSHRFIVKRRWVFTLESNG FT SNFATGYSSNPCAIPQSLPVLNKFAKQLGVRTEWKNTAGGDFGDIKSGALYLVLAPANG FT LTFVARGNIRMYFKSVGNQ" FT CDS complement(join(1420..1839,1923..2609)) FT /codon_start=1 FT /product="replication associated protein" FT /db_xref="GOA:E2FER3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E2FER3" FT /protein_id="ADN93260.1" FT /translation="MSSQLVSDSVMFDPRSYGEYPSSESAASLPLSFNVRSQHVFLTYP FT RCPIPPKDAGSFLKKLCKRYNIQYMYIAQELHQDGEPHLHAFLQFDKVFRTTSAKYFDF FT FEFHPNIQAARNPEKTLEYCQKNPADFYEDGVFVKPKASRKRKLASFTRDKKMKQIMAN FT ATSRDEYLSMIRKAFPFDWAIRLQQFEYSAKALFPEAPIQYQPQFVSNDMSDHPVIGEW FT LDTEFFTQERGPHHRRRSLYICGPTRTGKTSWARSLGTHHYWQHSVDFLTEWNKNAIYN FT VIDDIPFKFVPCWKGLVGSQFDITVNPKYGKKKTIPNGIPSIILANEDEDWLQTMSPQQ FT ADWFHGNCVVYYLQAGESFIPPSSDVEA" FT CDS complement(1722..2609) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:E2FER4" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E2FER4" FT /protein_id="ADN93259.1" FT /translation="MSSQLVSDSVMFDPRSYGEYPSSESAASLPLSFNVRSQHVFLTYP FT RCPIPPKDAGSFLKKLCKRYNIQYMYIAQELHQDGEPHLHAFLQFDKVFRTTSAKYFDF FT FEFHPNIQAARNPEKTLEYCQKNPADFYEDGVFVKPKASRKRKLASFTRDKKMKQIMAN FT ATSRDEYLSMIRKAFPFDWAIRLQQFEYSAKALFPEAPIQYQPQFVSNDMSDHPVIGEW FT LDTEFFTVSVSAYSVHALVSEEQAKLDLQWMSDVTRNEVRIIEDDPYISVDQQELERLL FT GPEVLELTTTGNTL" XX SQ Sequence 2762 BP; 676 A; 646 C; 690 G; 750 T; 0 other; taatattacc gcccccggcc catggcgagg gccctacgct cagcagggcc cgagcggctt 60 tacctgcttt ggtgttcttt aacttggatt ttcgcagtgc gatctgccat ctgaccggtt 120 ttgtctttta aaagaccgct cccccccttt gtttcgaatg gcgactccga catttgatag 180 tgcatatttt agatctggat ctgtggttca aaaccaagac gggacaagct ttgctttccc 240 ggtgaaggtg actgcccttg tctgcatttc ttcaattgta gcggccgcaa tacttgtatt 300 tttatacaag acctgtttac aagactgcat aacgcagtgg aggcttacga catacggcag 360 tcacttttca tctggttttg gaggtactca tttggtgacc tcaggccagc ctgagagtaa 420 ccatactccc attgtgagtt tacctgatag atctgcagtt tcagtgcccc ctgtttcgtt 480 acctgttggt ttgcaaacat catgagccct gcaggctcat ataagaggaa gcgctccgcc 540 gcttcgtctt cagcgacgcc aaaacgccgt cgcgtctata aacaagcagt gagtcgtcct 600 ctctcaagga gagaaccact gcaggtgcaa gattttacct gggagcaaga ttcggcgttc 660 aatgcaggtg gctccgccta cctgcttaca agttatgccc gcggttcagc tgagaatcag 720 cgcaagaccg cggagacgat cacctacaag gtggctatca accttggtgt tgctattagt 780 ggcactatgc aacaatactg tgtgtcgagc cggccagtgt gctggctcgt ttacgatgcg 840 gcaccgtccg gcacggctgt gacggctcaa gaaattttcg gattccctga tggtttgaag 900 aactggccaa caacttggaa agtggccaga tcggtgtccc accgattcat agtgaaacgt 960 cggtgggtgt ttacactgga gtccaacggc tccaattttg ctacggggta ctctagtaac 1020 ccgtgtgcca taccgcaatc cctgccggtt ctgaacaagt tcgcaaagca acttggcgtg 1080 cggacggagt ggaagaacac cgcaggggga gacttcggcg acattaagag cggcgctctt 1140 tacttagtgt tggctccggc taacggatta acttttgtag cacgcggaaa tatccgcatg 1200 tattttaaat ccgtcggtaa tcagtgatta ccgttcatgg tttatgaata ataaacacag 1260 tttgatgaca agcttggcaa attattatta aaatgaggca ttatgccgat tacaacatgg 1320 ttttgtgtgt cgggaggggg aacccggacc acgcacccaa aacacttaaa taaaacacac 1380 ccaacattac attattaata tgccgcccta gcggagaagc tatgcttcga cgtccgacga 1440 aggaggaatg aaagactctc ctgcttgaag atagtagacc acacagttgc cgtgaaacca 1500 gtcggcttgt tgaggcgaca tggtttgtag ccagtcttca tcctcgttcg cgaggattat 1560 tgaaggtatc ccattcggga tagtcttctt tttaccgtat tttggattta cggttatgtc 1620 gaactggcta ccaaccaacc ccttccaaca aggaacgaac ttgaacggaa tgtcatctat 1680 gacattatag atggcatttt tattccactc tgtgaggaaa tctacagagt gttgccagta 1740 gtggtgagtt ccaagacttc tggcccaaga agtctttcca gttcttgttg gtccacagat 1800 atataaggat cgtcttcgat gatgcggacc tcgttcctgg ttacatcaga catccattgg 1860 aggtcaagct ttgcttgttc ctccgatact aatgcatgaa cactgtaagc agagacactt 1920 acagtgaaga actcggtatc gagccactct ccaatgaccg gatggtcaga catgtcgttg 1980 gagacgaact gtggctggta ttgtatcgga gcttcgggga agagcgcttt ggcgctgtat 2040 tcaaactgtt ggagacggat tgcccagtca aacggaaatg ctttccgtat catggacaaa 2100 tattcgtccc tgcttgtggc gttagccatg atttgtttca tttttttgtc acgggtaaag 2160 gaagctagct tccttttcct cgatgccttg ggctttacga agaccccgtc ttcgtagaaa 2220 tctgccggat ttttctgaca gtattccaga gttttctctg gatttcttgc cgcctgaatg 2280 ttaggatgga attcaaagaa atcaaagtat ttggcggatg tggttcggaa aactttgtca 2340 aattgaagga acgcatgtaa atgcggttcc ccatcttgat gtagctcttg agcgatatac 2400 atatactgta tattataccg cttacaaagt tttttgagaa acgaaccagc atcctttgga 2460 gggattgggc accttgggta tgtcaggaag acatgttgag agcggacgtt gaagcttagc 2520 ggcagacttg ccgcactctc cgaacttgga tactcgccat aagagcgagg atcgaacatg 2580 actgagtcac tgacaagctg ggacgacata ataaaagagg acgtggctga atggagagcc 2640 gtaggatcgt ctttgagatc cgatttgtga gtgaaactct cttcctacca gtttgccaat 2700 gccgagtgcc aacctactct tttataggcc gccgccgcga catgggccga ggggcaaacc 2760 aa 2762 //