ID   HM119409; SV 1; linear; genomic RNA; STD; VRL; 1842 BP.
XX
AC   HM119409;
XX
DT   03-APR-2011 (Rel. 108, Created)
DT   03-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Chandiru virus segment S, complete sequence.
XX
KW   .
XX
OS   Chandiru virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Phenuiviridae; Phlebovirus.
XX
RN   [1]
RP   1-1842
RX   DOI; 10.1128/JVI.02275-10.
RX   PUBMED; 21289119.
RA   Palacios G., Tesh R., Travassos da Rosa A., Savji N., Sze W., Jain K.,
RA   Serge R., Guzman H., Guevara C., Nunes M.R., Nunes-Neto J.P., Kochel T.,
RA   Hutchison S., Vasconcelos P.F., Lipkin W.I.;
RT   "Characterization of the Candiru antigenic complex (Bunyaviridae:
RT   Phlebovirus), a highly diverse and reassorting group of viruses affecting
RT   humans in tropical America";
RL   J. Virol. 85(8):3811-3820(2011).
XX
RN   [2]
RP   1-1842
RA   Palacios G., Savji N., Sze W., Lipkin W.I.;
RT   ;
RL   Submitted (14-APR-2010) to the INSDC.
RL   Center for Infection and Immunity, 722 West 168th Street, New York City, NY
RL   10032, USA
XX
DR   MD5; ce4969c3beb795d516d4bec4467eeeec.
DR   EuropePMC; PMC3126144; 21289119.
DR   EuropePMC; PMC3168278; 21325481.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1842
FT                   /organism="Chandiru virus"
FT                   /segment="S"
FT                   /host="Homo sapiens"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="1967"
FT                   /db_xref="taxon:629725"
FT   CDS             48..782
FT                   /codon_start=1
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:F2W3Q2"
FT                   /db_xref="InterPro:IPR009522"
FT                   /db_xref="InterPro:IPR015971"
FT                   /db_xref="UniProtKB/TrEMBL:F2W3Q2"
FT                   /protein_id="AEA30071.1"
FT                   /translation="MSYEKLAVDIAGHEIDADTIKAWVQAFAYQGFDAKRVMELLVERG
FT                   GDDWVEDAKQMIILCLTRGNKPSKMMVKMSEKGKKIVQALVKRYSLKEGNPSRDDLTLS
FT                   RVTAALAGYTCQATEYVEEFLPVTGKNMDDLSKNYPRAMMHPSFAGLIDPKLPPDVLST
FT                   ICDAFSLFMVQFSRTINPRNRGLSVSEVASTFDRPINAAMNSSFISGEQRKSFLRNLGI
FT                   LDENMQPSNPVKAAAKVFRGLK"
FT   CDS             complement(972..1814)
FT                   /codon_start=1
FT                   /product="nonstructural protein"
FT                   /db_xref="InterPro:IPR039434"
FT                   /db_xref="UniProtKB/TrEMBL:F2W3Q3"
FT                   /protein_id="AEA30070.1"
FT                   /translation="MSNMLNNVFDIPHITRSATDRSKVYVEYSAYNGYWGTPICRYKGA
FT                   EFPCSSFTVSDKTSFRLRSFIDKGQLPRSWGKPFLQVKGKSPSFFDTTIEKISHLNLER
FT                   QLKWSEPNLKEALSWPLGVPTLAFFKLSLVESYEFNWEEKCFLMTLIMRSGDGAQIDDS
FT                   LVNLYKKLIRELGERDIPCLNFTGQNIEKEIAYVQVLRMLTALPYDYYESDFHSSLYDY
FT                   VKELSEVITPHLLGNRKWTPLHTMSPRYTRIADSWDSDLDSEEDMEIDGPAARWGEGN"
XX
SQ   Sequence 1842 BP; 535 A; 388 C; 371 G; 541 T; 7 other;
     acacaaagct catcnaggan tgttaactng ngantannta caccaagatg tcttatgaaa        60
     aacttgctgt tgatatcgcc ggccatgaga ttgatgccga cactatcaaa gcctgggtgc       120
     aagcttttgc ttatcaaggc tttgatgcta agagggttat ggagttgctg gtagagagag       180
     gtggagatga ctgggttgaa gatgctaagc agatgattat tctgtgcctt acaagaggaa       240
     acaagccctc caagatgatg gtgaagatgt cagagaaggg caagaaaatt gttcaagccc       300
     ttgtcaagag atattctctc aaggagggca acccttctag agatgatttg acactgtcta       360
     gagtgactgc tgctttagct ggatacacct gccaggccac agaatatgtt gaagagtttc       420
     tgcctgtcac tgggaagaac atggatgatc tatccaagaa ctaccccagg gcaatgatgc       480
     accccagctt tgcaggactc attgatccca aacttccccc agatgtgctg tcaacaatct       540
     gtgacgcatt tagcctcttt atggtccagt tctccaggac cataaacccc aggaatagag       600
     gattgtctgt gtcagaagtg gctagcactt ttgacagacc gataaatgca gccatgaata       660
     gctcattcat tagtggtgag cagaggaagt cattcctccg aaacctcggc attctcgatg       720
     agaacatgca gccctctaat cctgtgaagg ctgctgccaa ggttttccgg ggtctgaaat       780
     aatctgcccc attaatttct ctgatttgca taattgcatg ttaattggtt ataatcccca       840
     cccaacaatt tgactttaat tttccttaat tcacccacct taattaaagc aattaaatca       900
     attaaatata tcaataaaat aaaataaatc aaataaatta atcaaaatta atcatagtaa       960
     attaacccac ctcaattacc ctcaccccac ctggcagctg gtccgtctat ttccatgtct      1020
     tcttcagagt ccagatctga gtcccatgaa tcggcaattc tggtatatct ggggctcatg      1080
     gtgtgtagtg gggtccattt cctattccct aacagatgtg gggttatcac ctctgatagc      1140
     tctttgacat agtcatataa tgaggagtgg aaatctgatt cataataatc atagggcaga      1200
     gcagtgagca ttctaagaac ttgaacatat gcaatctctt tttcaatatt ttgaccagtg      1260
     aaatttaaac atggtatatc tctttcacct agttctctga ttagtttttt atacagattg      1320
     acaagagaat catctatttg agccccatca ccacttctca taatcagagt catgagaaaa      1380
     cacttttctt cccagttaaa ttcatagctc tctactaaag aaagcttgaa gaatgctaga      1440
     gtgggaacac ccaagggcca actgagtgct tctttaaggt taggttctga ccacttaagc      1500
     tgtctctcca agttaaggtg tgaaatcttc tcaattgtgg tatcaaagaa tgagggcgac      1560
     ttccccttca cctgaagaaa gggttttccc catgatcttg ggagctggcc tttatctatg      1620
     aagcttctta aacggaaaga agtcttgtca gaaactgtaa atgaagaaca tggaaattca      1680
     gctcctttat acctgcagat aggagttccc cagtatccat tgtatgctga atactccaca      1740
     tacactttgg atctgtctgt tgcagatcta gttatatgtg gtatgtcaaa gacgttattc      1800
     agcatgttag acatgattta ttttcgtcac tttttcgatc tc                         1842
//