ID   HM113532; SV 1; linear; genomic RNA; STD; VRL; 899 BP.
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AC   HM113532;
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DT   09-JUN-2010 (Rel. 105, Created)
DT   09-JUN-2010 (Rel. 105, Last updated, Version 1)
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DE   Tomato necrotic ringspot virus isolate Q1510 nucleocapsid (N) gene,
DE   complete cds.
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KW   .
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OS   Tomato necrotic ringspot virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; unclassified Tospoviridae.
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RN   [1]
RP   1-899
RA   Chiemsombat P., Sharman M., Srivilai K., Campbell P., Persley D.,
RA   Attathom S.;
RT   "A new tospovirus species infecting Lycopersicon esculentum and Capsicum
RT   annuum in Thailand";
RL   Unpublished.
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RN   [2]
RP   1-899
RA   Sharman M.;
RT   ;
RL   Submitted (11-APR-2010) to the INSDC.
RL   Department of Employment, Economic Development and Innovation, Queensland
RL   Government, 80 Meiers Road, Brisbane, QLD 4068, Australia
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DR   MD5; f919db80b8d1dde99d406cd6d70552e3.
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FH   Key             Location/Qualifiers
FH
FT   source          1..899
FT                   /organism="Tomato necrotic ringspot virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="Q1510"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /lat_lon="13.54 N 99.95 E"
FT                   /collection_date="13-Mar-2007"
FT                   /note="PCR_primers=fwd_name: TNRV.NPF, rev_name: CS3477R"
FT                   /db_xref="taxon:584711"
FT   gene            complement(1..846)
FT                   /gene="N"
FT   CDS             complement(1..846)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:B8Y670"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:B8Y670"
FT                   /protein_id="ADI43380.1"
FT                   /translation="MSNVRKTLSNEKIKELLAGGEADIEIELDEATPGFSFSKFYDENK
FT                   QDIFGKFTFNNGITILKSRKQIFAACKSNQFVFCGKQIAQNSDTADEKTWTFKRTEAVL
FT                   RVLMAKMVEECTTQKLQQDMYSKLMSLPMVIAYGLNVPPNFDSCATRLMLCVGGPLPLL
FT                   SSLPAMAPIAFSLAYFQNVKKQNLGIKNFSTYEQLCKVARVCDAAQVEFTGDLKKLFES
FT                   ATAILKTSSPGTASSISLKKYSEQIAHLEKAFGSKPVIDDFGSNSVSTSKPTRRGSIGL
FT                   "
XX
SQ   Sequence 899 BP; 247 A; 186 C; 168 G; 298 T; 0 other;
     ctacagtcct atacttcctc tcctagttgg cttgctagta ctcacactat tgctcccaaa        60
     atcatcaatg actggcttgg atccaaatgc tttctcaaga tgagcaatct gttctgagta       120
     cttcttcaag gatattgagc tagctgttcc aggtgagcta gtcttcaaaa tagctgttgc       180
     agattcgaac aatttcttca aatcaccggt aaattcaact tgagcagcat cacacactcg       240
     agcaacctta catagctgtt catatgtaga aaagtttttt attccgagat tctgtttttt       300
     gacattctgg aaatatgcaa gagagaaagc tataggtgcc attgcaggga gactggacaa       360
     taaaggcaaa ggaccgccga cacacagcat cagcctggtt gcacaggaat caaaattggg       420
     aggtacattc aacccgtaag caataaccat aggaagtgac ataagttttg aatacatatc       480
     ttgctggagt ttctgggttg tgcattcttc aaccatcttt gccatgagaa ctctaaggac       540
     agcttcagtt ctcttgaatg tccatgtctt ttcatcagca gtgtcagaat tttgtgctat       600
     ctgctttcca caaaagacaa attgattgct cttgcaggct gcaaatatct gctttctact       660
     ctttagtata gttattccat tgttgaacgt aaattttccg aagatgtcct gtttgttttc       720
     atcatagaat ttagaaaagc tgaatcctgg tgtagcttca tcaagctcta tttcaatgtc       780
     tgcttctcct ccagctagca attccttgat tttctcgttt gacaaggttt tcctaacgtt       840
     agacatgctg tttacgggtg aaacaattta ttagtagttt tcagaaatat tcttttttg        899
//