ID HM029247; SV 1; linear; genomic RNA; STD; VRL; 3431 BP. XX AC HM029247; XX DT 10-OCT-2010 (Rel. 106, Created) DT 10-OCT-2010 (Rel. 106, Last updated, Version 1) XX DE Blueberry latent virus isolate MI-2, complete genome. XX KW . XX OS Blueberry latent virus OC Viruses; Riboviria; Amalgaviridae; Amalgavirus. XX RN [1] RP 1-3431 RA Martin R., Zhou J., Tzanetakis I.E.; RT "Blueberry latent virus: An amalgam of the Partitiviridae and Totiviridae"; RL Virus Res. 0:0(2010). XX RN [2] RP 1-3431 RA Zhou J., Tzanetakis I.E.; RT ; RL Submitted (23-MAR-2010) to the INSDC. RL Plant Pathology, University of Arkansas, 495 N Campus Drive, Fayetteville, RL AR 72701, USA XX DR MD5; 87a570602d7932074be459ec36628943. XX FH Key Location/Qualifiers FH FT source 1..3431 FT /organism="Blueberry latent virus" FT /host="blueberry" FT /isolate="MI-2" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="2009" FT /db_xref="taxon:430710" FT 5'UTR 1..166 FT CDS join(167..979,981..3332) FT /codon_start=1 FT /ribosomal_slippage FT /product="fusion protein" FT /note="+1 ribosomal frameshift" FT /db_xref="GOA:E2F274" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:E2F274" FT /protein_id="ADO14118.1" FT /translation="MAGASGSILPVETTEQTQARVSTALAPLTGVLGNIERFSVEAIIN FT SNLTVDIFLKAIKSLVAYAQQDILENIASAANTAGAIQHVINMTPKDLFDLSRWVKTAA FT GMEAISKITTQRRLLRQGGAGRSASQVAWVNLFTQQQADYAQEKKRKMTRFERKREDLK FT LQPAQLDTDEAASMERLAAKYPTQVALPATMETELVAACWAAYVADCDRRGITPSAKTN FT ASLTEAVKHYSANVRDQILTTYCEQENVQADLTRYAREKIQSFRDSGNQEESPVLEISI FT RQQLEQRLISLPLELRKFHMKQVPFGIPLHKRGRPSCKPLLTKLSPELLLRRTQIGHRE FT KPPLGIRTELAQPPLKALEDCSRIGVLRSLAPQADKLIPRSRSKWEAGVRKIIGGGELK FT DWFKAKSMYRGGGNLFDALRLLSACDDYDGYTRLKGNYSVEAAREKLLLPSGLRVPDGV FT GCVHMKNFNDEASAGPLCRAFGIRRKAGLKSRLEQFAWEIYDGIGNGDLDLGAIPPFLA FT RVGYRTKLVTGEKAMRKISTGDSIGRAIMMLDAYEQAFSSPIFNVISDAVTHLHSDPTS FT GWRNYLIRASSDWGKMYKEMRKARVVVELDWKKFDRERPADHISFFIDVILSCFAPRTT FT REEKLLGAYRRAMENALLHRVLVTDDGGVLTVDGMVPSGSLWTGIIGTGLNILYIGYAL FT SDIGISPLNYVPKCAGDDNLTFFSRDYGDAAFKRLRVKLNEMFRANIDEEDFIIHRPPF FT FVTKAQAVFPPGTDLSKGTSSILNQCKWVQFEGEIIIDEAMGLSHRWEYRFQGKPKFLA FT NYWLPDGRSIRPATDSLERLLYPEGLHQTIEDYEMAVLAMVVDNPWNSHNVNHMMHRFC FT IVQQIKRQSMVGIKAEDVMWYSKLRGKEGEGIPYPQVAYWRRQEKKVFMEEIPELMGYI FT KKFQTFLSGVSTLYSRDSAGGIDAWMFMSILRGERDVGAGQFGNDIIEWCKFLNKNPLT FT SGLRAAKRFRGEVRSEEASTQVAQRWVEMISTVRERLRNPLLGSPRSFALWVSDMYAEN FT VFSNVS" FT CDS 167..1294 FT /codon_start=1 FT /product="ORF1" FT /db_xref="UniProtKB/TrEMBL:E2F275" FT /protein_id="ADO14117.1" FT /translation="MAGASGSILPVETTEQTQARVSTALAPLTGVLGNIERFSVEAIIN FT SNLTVDIFLKAIKSLVAYAQQDILENIASAANTAGAIQHVINMTPKDLFDLSRWVKTAA FT GMEAISKITTQRRLLRQGGAGRSASQVAWVNLFTQQQADYAQEKKRKMTRFERKREDLK FT LQPAQLDTDEAASMERLAAKYPTQVALPATMETELVAACWAAYVADCDRRGITPSAKTN FT ASLTEAVKHYSANVRDQILTTYCEQENVQADLTRYAREKIQSFRDSGNQGGVTRVRNLY FT TAATGAAIDIPPPRAQEVPHETGPVRDPIAQTGEAQLQAVAHQALTGVVIEADPDRAQG FT EASSGDSDRASAASTESTRRLQPDRRVKKPRTTGR" XX SQ Sequence 3431 BP; 899 A; 651 C; 962 G; 919 T; 0 other; gtatttttat tttcggacac cgaggttcct tctgcgtgag ctatctgata gtcttcggct 60 ctcttgctcc ttacaattgc tttcctctct tttgcaatct tgcttgtttg tttttctttt 120 gccggactaa ctttttcagg tctctattct cttcatctta acgacgatgg ctggtgctag 180 tggttcaatc cttccagttg agactacgga gcagactcag gctagggttt ctactgcttt 240 agctccgctg actggggttt tgggtaatat tgagcgattc tctgtggagg ctattatcaa 300 ttccaacctt actgttgaca tcttcttgaa ggctatcaag tctttggtgg cttatgctca 360 gcaggacatc cttgagaaca tcgcctcagc ggccaacaca gctggtgcta ttcagcacgt 420 tattaatatg actccaaagg atctctttga cctatcaagg tgggtgaaga ctgctgctgg 480 aatggaggct atttccaaga ttactaccca aaggagattg ctgaggcaag gtggtgcggg 540 gaggtctgct tctcaggttg cctgggttaa cctttttacc cagcaacagg cggactatgc 600 tcaggagaag aagaggaaga tgactaggtt tgaaaggaag agggaggact taaagttgca 660 gccggcacag cttgataccg atgaggctgc ttccatggag agacttgctg ccaagtaccc 720 cactcaagtg gccttacctg ctaccatgga gacagagttg gtggctgcgt gctgggcggc 780 gtatgttgca gattgtgata ggcgggggat tacacccagt gccaagacga atgcttcttt 840 aactgaggcg gtgaagcatt atagtgctaa tgtgcgggac cagattctta cgacctactg 900 tgaacaggag aatgttcagg cagatctgac caggtatgcc agggagaaga ttcagtcttt 960 tcgtgactca ggaaaccagg gaggagtcac ccgtgttaga aatctctata cggcagcaac 1020 tggagcagcg attgatatcc ctccccctcg agctcaggaa gttccacatg aaacaggtcc 1080 cgttcgggat cccattgcac aaacggggga ggcccagctg caagccgttg ctcaccaagc 1140 tctcaccgga gttgttattg aggcggaccc agatcgggca cagggagaag cctcctctgg 1200 ggattcggac agagctagcg cagcctccac tgaaagcact agaagattgc agccggatcg 1260 gcgtgttaag aagcctcgca ccacaggcag ataaactgat accacggagc cgtagcaagt 1320 gggaggccgg cgtgaggaag atcattggag gtggggaact taaggactgg tttaaggcta 1380 aaagcatgta tagaggaggg ggtaacttat ttgatgcatt acgattactc tccgcttgtg 1440 acgattatga cggttacact agacttaagg gaaactattc tgttgaagct gctagggaaa 1500 aactactatt accttctgga ttgagggtgc ctgatggagt aggttgcgta catatgaaga 1560 attttaatga tgaagcgtca gcaggcccat tgtgccgggc tttcggtata cggagaaagg 1620 caggtttgaa atccaggtta gagcaattcg cttgggaaat atatgatgga ataggtaatg 1680 gggaccttga tcttggggcc attcccccgt ttctggcgag ggttggttat cgaactaagc 1740 ttgtgacagg agagaaggct atgaggaaaa tttctacagg tgattcaatt ggcagggcta 1800 ttatgatgtt agatgcatat gagcaggcat tctcttcacc aattttcaac gtgattagtg 1860 acgcagttac gcacctacat tctgacccaa cttcagggtg gaggaattat cttatcagag 1920 cttcttcaga ctggggtaag atgtataagg aaatgagaaa ggcaagggtt gtggtggagc 1980 tagactggaa gaagttcgat cgtgagaggc ctgcggacca catatccttc ttcattgatg 2040 taattctttc atgcttcgca ccgaggacta cccgtgagga gaaattgtta ggagcataca 2100 gacgggctat ggagaatgct ttgttacaca gagttctagt gaccgatgat gggggagtat 2160 tgaccgttga cgggatggtg ccgagtgggt cattatggac agggatcatt ggaacagggt 2220 tgaatattct gtacataggc tatgctttga gtgacatagg tatcagccct ctcaactatg 2280 tgccgaaatg tgcgggtgac gataatctta ctttcttctc aagggattat ggggatgcgg 2340 ccttcaagcg gttgagggtg aagttgaatg agatgttccg ggctaacatt gatgaggagg 2400 atttcattat acatcgtccg cccttcttcg tgactaaggc tcaggcagtt ttccctccag 2460 ggactgattt atctaaggga acgagcagca ttctgaatca atgtaaatgg gttcaatttg 2520 aaggggagat aatcattgat gaggctatgg gattatcgca tagatgggaa tatagatttc 2580 aaggaaagcc aaagttctta gctaattatt ggttaccaga tggaaggagt attaggcctg 2640 caacggattc gctagaaaga ttgctttacc cagagggatt gcatcaaact atagaagatt 2700 acgagatggc ggtactggct atggtcgttg ataatccatg gaactcacat aacgtaaacc 2760 atatgatgca caggttttgt attgttcagc agatcaaaag gcagtccatg gttggcatta 2820 aggcagagga cgtgatgtgg tactctaagt taagagggaa agagggtgaa ggaattcctt 2880 acccgcaggt ggcatattgg agaaggcagg agaagaaggt cttcatggaa gagataccag 2940 aactaatggg ctacataaag aaatttcaga ctttcctttc aggagtttca actctataca 3000 gccgggactc agcggggggt atcgatgctt ggatgttcat gagcattctg cgtggggaga 3060 gagatgttgg ggcaggacag tttggaaatg atatcataga atggtgcaag ttcctaaaca 3120 aaaatccttt aacaagtggt ttaagagcgg cgaagagatt tagaggggag gtgagatcag 3180 aggaggccag tacgcaggta gcacaaagat gggtagagat gatttctacg gttagggaga 3240 ggctcagaaa tcctctccta gggtctccac gaagttttgc cctatgggtt agtgatatgt 3300 atgccgagaa tgtatttagt aatgtttctt aaatgcatgt ataaattgtt ttttgtattg 3360 agtattgaga aatgaagttt tattttgata gtgacaaacg caccgggtca ccggtacgtg 3420 tgtcactatc c 3431 //