ID HM026454; SV 1; linear; genomic RNA; STD; VRL; 6643 BP. XX AC HM026454; XX DT 03-OCT-2010 (Rel. 106, Created) DT 03-OCT-2010 (Rel. 106, Last updated, Version 1) XX DE Frangipani mosaic virus isolate FrMV-P, complete genome. XX KW . XX OS Frangipani mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6643 RX DOI; 10.1007/s00705-010-0766-1. RX PUBMED; 20668892. RA Lim M.A., Hong J.S., Song Y.S., Ryu K.H.; RT "The complete genome sequence and genome structure of frangipani mosaic RT virus"; RL Arch. Virol. 155(9):1543-1546(2010). XX RN [2] RP 1-6643 RA Lim M.A., Song Y.S., Ryu K.H.; RT ; RL Submitted (22-MAR-2010) to the INSDC. RL Plant Virus GenBank, Horticultural Science, Seoul Women's University, Seoul RL 139-774, Korea XX DR MD5; 716e415514d05cbcb031901050ae7b3b. DR EuropePMC; PMC5282660; 28137291. DR RFAM; RF01072; TMV_UPD-PK3. DR RFAM; RF01115; TMV_UPD-PK2. XX FH Key Location/Qualifiers FH FT source 1..6643 FT /organism="Frangipani mosaic virus" FT /host="Plumeria rubra f. acutifolia" FT /lab_host="Nicotiana benthamiana" FT /isolate="FrMV-P" FT /mol_type="genomic RNA" FT /identified_by="Mi Ae Lim" FT /db_xref="taxon:99585" FT CDS 78..5030 FT /codon_start=1 FT /transl_except=(pos:3516..3518,aa:OTHER) FT /product="187 kDa polymerase" FT /note="readthrough protein" FT /db_xref="GOA:E2F1P6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E2F1P6" FT /protein_id="ADN93254.1" FT /translation="MAHISDIATLSGAPAAAVDKVVSELACKKIYEDTVNTLQSLDKRP FT KIYFSRALTQEHVALVTRAYPEFNVQFTGTTNSVHNLAGGLRSLELEWMMTQIPYGYPT FT YDIGGNFSAHMLKGRSYVHCCNPMLDIRDIARVQGYHENIKRHISKHSVKPTAISSHDV FT PKHRALPEYQLDAFRTYHEHPEYITCNDRFQECKIPVEESNYAVSLHSLYDMDADELGP FT ALLRKNVQTMYAAFHMSEEIAMGYAEGTLNDINAVFSRQGEDIVFTFLEESTLAYKHKF FT SNLMAYTARTFFPASTRYVYFKEFLCSRVCTKFVKFCLVDTHCLNRSVFSVAPEIDTEM FT DDMWERSALCCTLREKTPIFTDKALMSVWFPKGSKCVLLPIFEGFFEKSDHVTESWEMV FT DKNFVFTVLNHVQTYQAKQLTFQNVLSFCESIRSRVVVNGTSVRSEWDIPLELISKISL FT SLFLIAKFNNLKAEAVIKSFNFEKRNVLSLGYSAFKEFMQEHTEPLTCWLLKKGYMKSV FT EDRLEIRDIDLLMSFEDSIKLSYNGISKPKSCDVSESLSASDKLFILASDISKRFPSVS FT FDQEKFIHFCNSLKVDLDVVSKVLAGLTTGDFGITLAGISASQCPESTLAATFAHVDGS FT RGDNLCSATSLALDRCKKDREVYTVPKEHCIKGPNGEKGKRVWVEKPSIGLPLAGISGE FT ASMKFTLLDDDGVETDLSDLNGKMVSEFKNLKKKILLYSGSVREQQMKNAIDYYAAVVT FT ATLNNLQKIVHDYMPGQAKGFKTYGVYDCATKSWLLEPPTYGHAWGVADTTEGDKIVYL FT SADKEHQEKLICPSNWKRVAVNGDSMLFSSMKILQKLSNIEIRDPECKFVLVDGVPGCG FT KSAEIIERCDLSKDLVLCAGRSASEMLRGRLNKIGKKATNSNVRTIDSFLMNPIPLSYD FT KVWVDEGLMVHTGIISFIALFSKAKTCYIYGDTKQIPFLNRVMDFEYPERLKNLVVDEV FT ESRNVTHRCPMDVTLQLNEVYKRHVSTTSSVERSLHVENLIGNAVFQPERYKETWDKIL FT VFTQAEKQTLKKRGYKSVNTVHEVQGETFKDVALVRLDPTQLSLVEKGSPHILVALSRH FT THRLVYYTVKLDNLCTQIESLCSVPSFMLQTFRVDSSTKXQLMDLPVYEFRNLHKETAK FT SNSASDLQYYYDCCLPGNSTVLNNFDATTIRLTDIALNSQDIRLTLSKLDPVPELVKES FT SRSYLQPVLRTAVEKPRTPGLLENWIAMIKRNFDCPELSGDVDIDAVAEKVVSRFFDVY FT VNKDRLEADSYMGSESLVCEWLRKQTPATLGQLENIKCMGAVNEYKHMIKRQPKAKLDN FT SILSEYPALQTIVYHSKDINAIFGPVFDDMTRRLLESIDSERFLFFTRKTPSDVQDFFS FT NLSSKQELDVYELDVSKYDKSQNEFHCAVEMKIWERLGFDKYLKYVWEMGHKLTTITDY FT SAGIKTSVWYQRKSGDVTTFIGNTIIIAACLASCMPMEKSFKAAFCGDDSIVYMPKGTP FT CDNVHAGASLMWNFSAKLYRRSQGYFCGKYIVRHPGGCIVYPDPLKLISKLGNKSIKDW FT NHLEEFRVSLFDVFKPLSNNCYYMFLDDAIREVFPHACSCSFVLCALYKYLSDPVSFRS FT LFIEPEKNNGTS" FT CDS 78..3518 FT /codon_start=1 FT /product="129 kDa replicase" FT /db_xref="GOA:E2F1P7" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E2F1P7" FT /protein_id="ADN93253.1" FT /translation="MAHISDIATLSGAPAAAVDKVVSELACKKIYEDTVNTLQSLDKRP FT KIYFSRALTQEHVALVTRAYPEFNVQFTGTTNSVHNLAGGLRSLELEWMMTQIPYGYPT FT YDIGGNFSAHMLKGRSYVHCCNPMLDIRDIARVQGYHENIKRHISKHSVKPTAISSHDV FT PKHRALPEYQLDAFRTYHEHPEYITCNDRFQECKIPVEESNYAVSLHSLYDMDADELGP FT ALLRKNVQTMYAAFHMSEEIAMGYAEGTLNDINAVFSRQGEDIVFTFLEESTLAYKHKF FT SNLMAYTARTFFPASTRYVYFKEFLCSRVCTKFVKFCLVDTHCLNRSVFSVAPEIDTEM FT DDMWERSALCCTLREKTPIFTDKALMSVWFPKGSKCVLLPIFEGFFEKSDHVTESWEMV FT DKNFVFTVLNHVQTYQAKQLTFQNVLSFCESIRSRVVVNGTSVRSEWDIPLELISKISL FT SLFLIAKFNNLKAEAVIKSFNFEKRNVLSLGYSAFKEFMQEHTEPLTCWLLKKGYMKSV FT EDRLEIRDIDLLMSFEDSIKLSYNGISKPKSCDVSESLSASDKLFILASDISKRFPSVS FT FDQEKFIHFCNSLKVDLDVVSKVLAGLTTGDFGITLAGISASQCPESTLAATFAHVDGS FT RGDNLCSATSLALDRCKKDREVYTVPKEHCIKGPNGEKGKRVWVEKPSIGLPLAGISGE FT ASMKFTLLDDDGVETDLSDLNGKMVSEFKNLKKKILLYSGSVREQQMKNAIDYYAAVVT FT ATLNNLQKIVHDYMPGQAKGFKTYGVYDCATKSWLLEPPTYGHAWGVADTTEGDKIVYL FT SADKEHQEKLICPSNWKRVAVNGDSMLFSSMKILQKLSNIEIRDPECKFVLVDGVPGCG FT KSAEIIERCDLSKDLVLCAGRSASEMLRGRLNKIGKKATNSNVRTIDSFLMNPIPLSYD FT KVWVDEGLMVHTGIISFIALFSKAKTCYIYGDTKQIPFLNRVMDFEYPERLKNLVVDEV FT ESRNVTHRCPMDVTLQLNEVYKRHVSTTSSVERSLHVENLIGNAVFQPERYKETWDKIL FT VFTQAEKQTLKKRGYKSVNTVHEVQGETFKDVALVRLDPTQLSLVEKGSPHILVALSRH FT THRLVYYTVKLDNLCTQIESLCSVPSFMLQTFRVDSSTK" FT CDS 5017..5787 FT /codon_start=1 FT /product="28 kDa movement protein" FT /db_xref="GOA:E2F1P8" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:E2F1P8" FT /protein_id="ADN93255.1" FT /translation="MALVELKEPKQLKVNDFVKMSFADKILPRSLTRLRTVSISETNVV FT KLSGLGSTVNLNILKGVVLNSESKYVTIRGVVISGVWMVPEGCGGGATVTLMDRRMKGF FT KNGLVAEFKTRASSRDFQFKFIPNYSMCVDDVKRAPWELFFKLVGVPIEDGYYPLAIEI FT ATLVEQSRTIINHGLRATILKRCDDISDLELPSVDLDESIELISNSNIVSKRKTHKKGK FT KRKNTKTESESSEFARVPNFRGNDLSESGDNEDI" FT CDS 5845..6369 FT /codon_start=1 FT /product="18 kDa coat protein" FT /db_xref="GOA:E2F1P9" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:E2F1P9" FT /protein_id="ADN93256.1" FT /translation="MSYTNISTTNIIYLARSYIPGVDFIDLIISGLGQSFQTQSARDEF FT RSQLIGSYKVVVSKTVRFPENTIYLWANNPTIRPLLHAVFQALDTRNRIIEVESTNVVN FT PTSSETREATRRVDDATVAVRSQLQLLFDALSGGSGLYDRKAFEDASGLVWEEAAAVGT FT AGTSGTGTTTA" XX SQ Sequence 6643 BP; 2013 A; 1120 C; 1492 G; 2018 T; 0 other; gtattattta ccaacgatta caaacacaat cacaggtaat ttaataacaa tttacaacat 60 acatttacaa taacatcatg gcacacatta gtgatattgc tactttgtct ggggctccgg 120 ctgctgctgt tgacaaggtt gtcagtgaac tagcttgcaa aaagatttat gaagacactg 180 ttaatacttt gcagtcattg gataaacgtc ccaaaattta tttttcaaga gcactcacac 240 aggagcatgt cgcactggtt actagggctt accctgagtt caatgtacaa tttaccggta 300 caaccaattc tgtccataat ttggccggtg gattgcgatc attagagctc gaatggatga 360 tgactcagat cccttatggg tatcccactt atgatattgg gggaaatttt tcagctcata 420 tgctaaaggg tcgttcttat gttcattgct gtaaccccat gttggacatt agagatattg 480 ccagagttca aggttaccat gaaaacataa aaaggcatat ttctaaacat tcagttaaac 540 ctactgcaat ttcttcccat gacgttccga agcatcgtgc attaccggag taccagctgg 600 acgctttcag aacttatcat gagcatcctg agtacattac atgcaatgat agatttcagg 660 agtgcaaaat tccagttgaa gaaagcaact atgctgtttc actccattct ctctatgata 720 tggatgctga tgaacttgga cctgcattac tgaggaaaaa tgttcaaact atgtatgcag 780 cgttccacat gagcgaagag atcgctatgg gttatgctga gggtactttg aatgacatca 840 atgcagtatt ttcgcggcaa ggcgaagaca tcgtgtttac ttttctagaa gaaagtacgc 900 tcgcgtataa acacaaattt tctaatttga tggcttatac ggctcgtact ttctttcctg 960 ctagtactag atatgtttat tttaaagaat ttttgtgttc tagagtctgt acaaagtttg 1020 taaagttttg tcttgtagat acgcactgtc tcaatcgaag cgttttttct gtcgctcccg 1080 aaattgacac cgaaatggac gatatgtggg aacgcagcgc attatgctgt acgcttagag 1140 aaaagacacc gatcttcaca gataaagctt taatgagtgt atggtttcct aagggtagta 1200 agtgtgtttt acttcctatt tttgaagggt tttttgaaaa atctgatcat gttactgaat 1260 cgtgggaaat ggtggacaag aacttcgttt tcacagtttt aaatcatgtc caaacctatc 1320 aggcgaaaca gttaacattt cagaatgttt tgtccttttg tgagtcaata agatcaaggg 1380 tagtagtcaa tggtactagt gtaagatcgg aatgggatat acctttagag ttaatatcaa 1440 aaatctcctt gtccttattt ttgatcgcta agtttaacaa tttaaaggct gaagcagtaa 1500 ttaaaagttt caatttcgaa aagcgtaatg tgttatcact aggatatagc gcattcaagg 1560 aatttatgca ggagcatacc gaacctctca cttgctggct attgaaaaag ggttatatga 1620 agtccgttga agatagactc gagatcagag atattgactt gttaatgtca tttgaagact 1680 cgataaaatt atcatacaat ggcatttcaa aacctaaatc atgcgatgtt agtgagagtt 1740 tgtcggcaag tgacaaatta tttatccttg cgtccgatat atccaagaga tttccatctg 1800 tttctttcga tcaagagaaa ttcatccatt tctgtaacag tcttaaagtt gatttagacg 1860 tagtgtcgaa agtactggct ggtcttacga ctggagattt cggtattact ttagcaggca 1920 tatcagcaag tcaatgtcct gaaagtactc ttgctgcgac ctttgcacat gttgatggtt 1980 ctaggggtga taacttatgt tctgctacgt ctttggcatt agatagatgt aaaaaggata 2040 gggaagtata caccgtaccc aaggaacatt gtataaaggg tcctaatgga gaaaaaggaa 2100 aaagagtctg ggttgaaaaa ccctcaattg gtctaccact tgcaggaatt tctggtgaag 2160 caagcatgaa gtttactttg ttagatgatg atggagttga aactgacctc agtgatctga 2220 atggaaaaat ggtcagtgaa tttaaaaatc tcaaaaagaa aattttgttg tacagtggta 2280 gcgtgagaga acagcagatg aaaaatgcaa ttgactacta tgcagctgtg gtgacggcaa 2340 ccttgaacaa tttgcaaaaa atagtacatg attacatgcc cggtcaggca aaaggtttta 2400 aaacctatgg tgtgtatgat tgtgctacca aatcatggtt gctagaacca cccacttatg 2460 gccatgcttg gggtgttgct gacaccaccg aaggagacaa aattgtttac ctgtctgcgg 2520 ataaggaaca tcaagagaaa ttgatatgtc catcaaactg gaaacgtgtt gcagttaacg 2580 gggatagcat gctattttct tctatgaaga ttcttcagaa gctatccaac attgagatta 2640 gagatcccga gtgcaaattt gtactcgttg atggcgttcc aggatgtgga aagagtgcag 2700 agataatcga aagatgtgat ctgtccaaag acttggtact ttgtgctgga aggagtgcat 2760 ctgagatgct caggggaaga ttgaacaaaa tagggaaaaa ggctactaat tctaatgtaa 2820 gaactatcga ttcatttctc atgaatccta ttcctctatc ttatgataag gtttgggtag 2880 atgagggatt gatggtgcat actggaatta ttagttttat cgctttgttc tcaaaggcaa 2940 aaacatgtta tatttatggt gatacaaagc aaattccctt tctgaacagg gtcatggatt 3000 ttgagtatcc cgagcgtctc aagaatctgg tggttgatga ggtagaaagc aggaatgtaa 3060 cgcacagatg tcctatggat gtcacgttac aactgaatga agtttataag aggcatgtgt 3120 caactacaag ttctgtggaa aggtcgctgc atgttgaaaa tttgattgga aatgctgtgt 3180 tccagcctga aaggtataag gaaacatggg ataaaatctt agtattcacc caggctgaga 3240 aacaaacttt aaaaaaaaga ggttacaagt ctgtgaacac tgtgcatgag gtacaaggcg 3300 aaacttttaa agatgttgca ttggtgaggt tggaccctac tcaattatct ttggttgaga 3360 aaggttcacc tcatattttg gtggcacttt caaggcacac tcacagattg gtgtactata 3420 cagtgaaact tgataacttg tgcacacaaa tagaatcact gtgtagtgta ccatctttca 3480 tgttacagac attcagagtc gattcttcga ccaaatagca attaatggac cttcccgtgt 3540 atgagtttcg caacttacac aaggaaactg caaagtccaa ttctgcttct gacttgcagt 3600 actattatga ttgttgtctg ccaggaaata gcactgtgct taataatttt gatgcaacta 3660 caattcgact taccgatatc gctcttaatt ctcaggacat acgattaaca ctgtcaaagc 3720 tcgatcctgt tcctgagcta gtcaaagagt catctaggtc ttatttacag cccgtactca 3780 ggactgctgt agaaaaacct aggactccag gcctgctcga gaactggata gcaatgatta 3840 agcgtaattt tgattgtcca gaactaagtg gtgatgttga tatcgatgca gtagctgaga 3900 aagttgtttc caggttcttt gatgtatatg tgaataaaga taggttggaa gcggactcat 3960 acatgggaag cgaatcgtta gtttgcgaat ggttgagaaa gcagactcca gctacactgg 4020 ggcaattgga aaatattaaa tgcatgggcg ctgtaaatga gtataaacat atgattaaga 4080 ggcagcccaa agcaaagctt gataatagta ttttatcgga gtacccagct ttgcaaacaa 4140 ttgtttatca tagcaaggat attaatgcaa tcttcgggcc ggtttttgat gacatgacta 4200 gacgtctcct ggaaagcata gattctgaaa gatttctttt cttcacaagg aaaactccga 4260 gtgatgttca agatttcttt tcgaatctaa gttcaaaaca ggaattggat gtctatgaat 4320 tggatgtctc caagtatgac aaatcccaga atgaattcca ttgtgcagtt gaaatgaaga 4380 tctgggaaag gttgggtttt gacaaatatc ttaaatatgt ttgggaaatg gggcataaat 4440 tgaccactat taccgattat tcggctggta tcaaaacgtc agtttggtat cagagaaaaa 4500 gcggtgatgt gacaacattc atagggaata ctatcattat tgccgcgtgt ctggcgtcat 4560 gtatgcctat ggaaaaatca ttcaaagctg cgttttgtgg tgatgattct atagtataca 4620 tgccaaaagg tactccgtgc gataatgttc atgctggagc gagcttaatg tggaattttt 4680 cagccaagct atacagaagg tcccaaggat atttttgtgg taaatatata gtgagacacc 4740 ccggtggttg catagtatat cctgatcctt taaaattgat ttcaaaactg ggaaataaaa 4800 gtatcaaaga ttggaatcat ttagaagagt ttagagtgtc tctttttgat gtttttaaac 4860 ctttatccaa taattgttat tatatgtttt tggatgacgc aattcgtgag gttttccctc 4920 acgcttgcag ttgttctttt gttttgtgtg ctttgtataa atatttgagt gatcctgttt 4980 cttttagatc tttgtttatt gagccggaaa agaataatgg cactagttga gctaaaggaa 5040 cctaaacaac ttaaggtcaa tgatttcgta aaaatgtcct ttgcagacaa gattttgcct 5100 agatcattga caaggttgcg aacggtctcc attagtgaaa cgaatgtcgt taaactttct 5160 ggtttagggt ctaccgtaaa tttaaatatt cttaaaggtg ttgtgctaaa ttcagagtcg 5220 aagtatgtca ctatcagggg tgtcgtaatt tctggagtgt ggatggttcc tgaaggttgc 5280 ggtggtggtg ctactgttac actgatggat aggaggatga aaggatttaa gaatggttta 5340 gttgctgaat ttaaaacgag agcctcctct agagacttcc aatttaagtt cataccaaac 5400 tattctatgt gtgtggatga tgttaaaaga gccccatggg aattgttctt taagctcgta 5460 ggcgtgccga tcgaagatgg ttactatcca ttagccatcg agatagccac acttgttgag 5520 cagtcaagga caattatcaa ccatggtctt agagcaacga tattgaaaag gtgtgatgac 5580 atttctgatc ttgaacttcc ttctgtggat ttagatgagt ctatagaatt aataagtaat 5640 tcgaatattg tttcaaaaag aaaaactcat aaaaaaggaa aaaagaggaa aaatacaaaa 5700 acagagtcag agtcttcgga atttgccaga gttccgaatt tcaggggtaa tgatttgagt 5760 gaaagtggag ataatgaaga tatttagtgt tgatttgtta attgagtcgt agagtcttga 5820 cagacgatac gtattcgata aacaatgtcg tacactaata tatcaacaac gaatattata 5880 tatctcgctc ggtcatatat tcctggtgtc gattttatag atttaataat ttctggtttg 5940 ggtcagtctt ttcaaactca atctgctaga gatgagttta ggtcgcagtt aataggtagc 6000 tacaaggtag tggtgtcgaa aaccgtgagg tttcccgaaa ataccatata cttgtgggcg 6060 aataatccaa ccatacgtcc tttgttgcat gccgtgttcc aggcgttgga tactaggaac 6120 cgtatcattg aagtggagtc aactaatgtg gtgaatccaa caagttctga gacaagggag 6180 gcgacaagga gagttgacga tgcgactgtg gccgtaagat cacaattgca gttgttattc 6240 gatgcacttt ctggaggttc tggtctttat gaccggaaag cttttgaaga tgcttcgggg 6300 ttggtatggg aagaggctgc tgcagttgga actgctggga cctctggaac gggtactact 6360 accgcgtaat aaatatataa taaaaacgtc atttgtagac gttaaaatta caaacgtggg 6420 ttcgacgata tgaactagtg tttttctgtc cacttaaatc gaacagaaca aacgtggtgc 6480 gtacgaaaac gcatagtgtt taccgatcca cttaaataga atcggggaca acttccgggg 6540 tctgctgtgc agacggaaac ggaggccggc aagtgctggg tccatcatga cacgatggat 6600 aagagaggtg caattcctcc ccttaacccc cggtagcggc cca 6643 //