Dbfetch

Dbfetch

ID   HM021142; SV 1; linear; genomic RNA; STD; VRL; 2018 BP.
XX
AC   HM021142;
XX
DT   19-MAY-2010 (Rel. 104, Created)
DT   19-MAY-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Phalaenopsis chlorotic spot virus isolate 7-2 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Phalaenopsis chlorotic spot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-2018
RA   Chen C.-C., Zheng Y.-X., Chen Y.-K., Jan F.-J.;
RT   "Isolation and characterization of a new potyvirus causing chlorotic spots
RT   on moth orchids (Phalaenopsis spp.)";
RL   Phytopathology 96:S22-S22(2006).
XX
RN   [2]
RP   1-2018
RX   DOI; 10.1007/s10658-008-9281-6.
RX   AGRICOLA; IND44039935.
RA   Zheng Y.-X., Chen C.-C., Chen Y.-K., Jan F.-J.;
RT   "Identification and characterization of a potyvirus causing chlorotic spots
RT   on Phalaenopsis orchids";
RL   Eur. J. Plant Pathol. 121(1):87-95(2008).
XX
RN   [3]
RP   1-2018
RA   Zheng Y.-X., Chen C.-C., Jan F.-J.;
RT   ;
RL   Submitted (22-MAR-2010) to the INSDC.
RL   Department of Plant Pathology, National Chung Hsing University, 250 Kuo
RL   Kuang Rd., Taichung, Taiwan 402, Taiwan
XX
DR   MD5; f86c607a99aacf1c6f261ae02399b8f1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2018
FT                   /organism="Phalaenopsis chlorotic spot virus"
FT                   /host="Phalaenopsis sp."
FT                   /isolate="7-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /db_xref="taxon:763077"
FT   CDS             <1..1642
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D6QZ54"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:D6QZ54"
FT                   /protein_id="ADG56781.1"
FT                   /translation="QFDSSLTPYLINSVVQIREHFMEPWDVGVRMLRNFYTEIIYTPIL
FT                   APDGTIVKKFKGNNSGQPSTVVDNTIMVVLAMHYAMERENWSEIERKSDIVFFANGDDL
FT                   IIAIKPEKEKFLDNLQSSFLELGLKYDFSNRHRDVRDLWFMSHRGIEHQGILIPKLEEE
FT                   RIVSILEWDRSTEISHRAEAICAAMIEAWGYPDMLRHIREFYLWLMQHPWYKDLVKEGR
FT                   LPYISESALKKLYTDEEINEHELAEYWRALVINDNEQEDEVVYQSGSGSATPSSQRQQA
FT                   PQGQEGSIDAGRNQQAQRPQPSSDVVRHDGSQAQDVGQVSHTIPRLKNISKMRLPKVKG
FT                   KIILSLDHIIDYKPDQLDLSNTRATHEQLQVWYNAIMNEYEVSESQMGVLLNGLMVWCI
FT                   ENGTSPNLNGEWVMMDGEEQVTYPLKPIIENAKPSFRQIMHHFSDAAEAYIEMRNREKP
FT                   YMPRYGLIRNLRDMSLARYAFDFYEINSRTPARAREAIVQMKAAALTNVSNKLFGLDGN
FT                   VTTTTEDTERHTASDVNARMHHLMGVTQG"
FT   mat_peptide     <1..799
FT                   /product="NIb protein"
FT   mat_peptide     800..1639
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1643..2018
XX
SQ   Sequence 2018 BP; 625 A; 382 C; 479 G; 532 T; 0 other;
     acagtttgat agttcgttaa ccccatactt gatcaattcg gttgtacaaa tcagagagca        60
     cttcatggaa ccatgggatg ttggtgttag gatgttacgg aatttttaca cagaaatcat       120
     ttacacacca attctagcac cagatggtac aatagtaaag aaattcaaag ggaacaatag       180
     tggtcagcca tcaactgttg tagataacac tataatggtt gttctggcaa tgcattacgc       240
     tatggagaga gagaactgga gtgaaataga acggaagagt gacatcgttt tctttgccaa       300
     cggggatgat cttattatag cgattaaacc agagaaggaa aagtttcttg acaatttgca       360
     gtcaagcttt ctagaactgg gcttgaaata tgatttttcc aacaggcaca gggatgtgag       420
     ggatctctgg ttcatgtcac acagagggat tgagcaccaa ggcatattaa taccaaagct       480
     cgaagaagag agaatagtct caattttgga gtgggacagg agcactgaaa tatcgcaccg       540
     ggctgaggca atttgtgcag caatgataga ggcatggggc tacccagata tgctcagaca       600
     tattagggag ttttacttgt ggctcatgca acacccatgg tacaaggatc ttgttaagga       660
     aggaaggttg ccatacatct cagaatcagc tcttaaaaag ctgtacactg atgaggaaat       720
     caatgagcat gaactagcag aatactggcg agcattagtg atcaacgaca atgagcaaga       780
     ggatgaagtc gtatatcaat cgggtagcgg ttcagccaca ccaagttctc aacgccaaca       840
     agctccccaa gggcaagaag gcagtattga tgcaggtcga aatcaacaag ctcagaggcc       900
     acagccttca agcgatgtcg tcagacatga tgggagccaa gcacaagatg ttgggcaagt       960
     aagtcacact attcctagac tcaagaatat ttcaaaaatg cgtctgccaa aggtgaaagg      1020
     aaaaatcatt ctctcacttg accacattat agattacaaa ccagatcaac ttgatctctc      1080
     aaacacgaga gcaacacatg aacagttgca agtctggtac aatgcgatca tgaatgaata      1140
     tgaggtcagt gaatcacaga tgggagttct attgaatgga ctgatggttt ggtgtattga      1200
     gaatggcacc tcaccaaatt tgaatggtga gtgggtgatg atggatggtg aggaacaagt      1260
     cacataccca ctaaaaccaa taattgagaa cgctaagccg tcatttcgac aaatcatgca      1320
     tcacttctca gatgcggctg aagcgtatat tgaaatgaga aatagagaga agccatacat      1380
     gcctcggtat ggcttgatca gaaatttgag ggacatgtcg ctagccaggt atgcctttga      1440
     cttctatgaa attaattcgc gcactccagc gcgtgctcgt gaagcgattg tgcaaatgaa      1500
     agcggctgcc cttacaaatg tttccaacaa actatttggt ttggatggga acgtcactac      1560
     tacaacggaa gacactgaga ggcacacggc ttctgacgtc aatgctcgta tgcatcatct      1620
     tatgggtgtg acgcagggct aactatcaaa atagttactg cattattata tttacttatg      1680
     tctagtttta catttaatat tttattacgt cttgttatag attagtagat cctagccttg      1740
     catacattcc aagaagagcc agggtggact ttccacgaga gcatttggtt ggatgcgcga      1800
     ctagttaagt aattttacct ttgtttgtat taatgcagcg tgttttattc agtagttgta      1860
     acctagccta tcactgttaa tttggcatgt cggagtgggc ttcccacgtg tgcatttcaa      1920
     gttactcatt gaaggtggaa aacgaaagca ctctaactca catgagtcac taagggtggc      1980
     tgggccacgt gtgaactgtg cgttttggat acagcttt                              2018
//