ID HM015524; SV 1; linear; genomic RNA; STD; VRL; 4786 BP. XX AC HM015524; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Rib1TL1 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4786 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4786 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; cea7dcaae8bcadafdf01b7f4cfdc89ca. XX FH Key Location/Qualifiers FH FT source 1..4786 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Rib1TL1" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2003" FT /proviral FT /note="biotype: T: Tomato Sw-5 resistance breaking" FT /db_xref="taxon:3052585" FT gene 101..1009 FT /gene="Nsm" FT CDS 101..1009 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EWA3" FT /protein_id="ADR66491.1" FT /translation="MLTFFSNRGSSKSAKKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDTSKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKICPNWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKINNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCVVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1295..4702) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EWA4" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EWA4" FT /protein_id="ADR66492.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVETIRGDHP FT EVYDDSAENEVPTAASIQRKAILETLTNLMLESQTPGTRQIREEELTIPIFAEPTTQKT FT ISVSDLPNNCLNASSLKCEIKGVSTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLIGLITYPILLLINCLWKYFPFKCSNCGNLCIITHECTKICICNKSKA FT SKEHSSECPILSKETDHDYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLVILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDTIIESIFGTNIVIEG FT PNDCIENQNCIAHPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLNKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSKITEEVPYENALFQADIQADLHNDGITIGELIAHGPDGHI FT YSGNIANLNDPVKMFGHPQLTHDGVPILTKKTLEGDDMSWDCAAIGKKSITIKTCGYDT FT YRFRSGLEQISDIPVSFKDLSSFFLEKAFSLGKLKIVVDLPSDLFKVAPKRPSITSTRL FT NCNGCLLCGQGLSCILEFFSDLTFSTSISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVVVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVILLIAFIFLVIYFCSILTTICKGYVKNKSYKSRSKIVDD FT DDSEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4786 BP; 1551 A; 843 C; 846 G; 1546 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaatta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactt ttttcagcaa 120 tagggggtct tctaagtctg ccaaaaagga tgaaggtcct ttagtttcac tagctaaaca 180 taatggtaat gtagaagtct caaaaccatg gtcttcttct gatgaaaagc ttgctttgac 240 taaagctatg gatacatcca aaggaaagat actgttgaac acagagggaa catcttcctt 300 tggaacctat gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgcaagaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaatgg 420 gaagcagaac gctaataagg tcatcaagat ctgtccaaat tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt ctgccccact ataccaaacc ctacagggaa 540 acttgtggtt gccctagttg atcccaacat gccatctgaa aagcaagtca ttctgaaggg 600 tcaagggaca ataactgatc ctatatgttt tgtcttttat ctgaactggt ctattccaaa 660 aataaacaac actccagaaa actgctgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaaaggggtt tcttttggta gtgtcatgta ttcttggaca aaggagtttt gtgattcacc 780 cagagctgat aaagacaaaa gttgtgtggt tatacctcta aacagagcta ttagagctag 840 atctcaagca ttcattgagg cttgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag agttgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgatagtg ttgctcagtt atcttttgat gaaatatagt acttttaata 1020 ccacttattt aagcttaaat tcctgttaat tttgcatttt aaaatcaaaa aacaaaacaa 1080 aaaacaaaaa acaaaaagag aaaaaacaaa aaacaaaaaa atcaaaaaca gaaaacaaaa 1140 acaaaataag gctgaaaagc caaactttgg tccgaagact ctttttgttg ttttttgttt 1200 atttgtattt tttgtttgtt ttttgtttat tttatatata cataatctga ctaatgtaga 1260 aaattgaatc aaatttagcc tgtgacaagc agcctcagac aaggtgagag aaatccatag 1320 gtggccttcg tcttgtcatt gtatctttca ttaacatagg ggctttgatc tcagaatcat 1380 catcatccac tatcttggat ctagatttat aagatttatt cttgacatat cctttacaaa 1440 tggttgttag aatagaacag aaataaatta caaggaaaat gaatgcaata agcaatatca 1500 ctctgatagt atcaaaaaac gagccaaaat aacttgcaat gaaattgaat gggctcttaa 1560 tataatccca gaaaccccat gctgaagaat cagaattata ttgttgttct tcatgagcat 1620 actcatcatt ttgatctatt atgttctctg gttcttctac gacaacatta ttgaccagaa 1680 cctccacaga aatatctgga ttgccttctg gatacaacgt cattttcttc ttgtccggat 1740 tagcagaaca aaacattgtt atgttgtatt tatttgaccc ttttttaaca gccagttgat 1800 aagtagatag agagcaagca tctatagaaa ttgaagtaga aaatgtcaaa tccgagaaaa 1860 attctaagat gcaagataaa ccttgaccgc atagaagaca gccgttgcaa tttaatcttg 1920 ttgaagttat ggaaggtctc ttaggagcaa ctttaaaaag atcagatgga agatcaacga 1980 caatcttgag tttgcctaaa ctgaaagctt tttccaagaa aaaactagag agatctttga 2040 aactaacagg aatatctgat atttgctcta aaccagatct aaatctgtat gtatcatatc 2100 cgcatgtttt aatagtgatt gattttttcc ctattgctgc acaatcccaa gacatgtcat 2160 ctccttctag agttttctta gtaagaatag gcactccatc atgagtcaat tgtgggtgac 2220 caaacatttt gacaggatca ttcaagtttg caatatttcc agaataaata tggccatcag 2280 gtccatgagc tatcagttca cctatagtga taccatcatt gtgcagatct gcttgtatat 2340 cagcttgaaa caaggcattt tcataaggaa cctcttcagt gatctttgag cactgacctc 2400 ctaaaatacc agaaatacaa acatctgcca ctatagttga ttttagcact gaataaattc 2460 tgtatgattt atccatgtca tagatattcc gacagaatcc acatgtagca ccttcattaa 2520 ttgcaaaaca ccaagcttct tcacatcccc aataagaagt tggtgttata caaaaatctt 2580 ggaaacctgt taaagcttga ttttttctgc aagtgtcaca gttccctgta caagttgaat 2640 aaaaatctgt gtgagtactt tggatagggg ctgttgtgta tttttctgac acttcataat 2700 gaattcccac acttttgata taaatcacaa attttttggc tgtttccgag gtcttatcat 2760 tcaacatgaa tatagtccct cctcctccta aaagagattg ttctatcatg tatctatatt 2820 tcccgtctac aacagaatca aagatcaatg attgtctagg cagaatgttc tctggtatgc 2880 ttgtttcatt tttgtttaga gagtctcctg caatcattcc agaaattttg tctgtacgat 2940 tataagaatc tattatacca ttcctcaatc tcttagcttc atacagacca accgatgtta 3000 accctaaaga gcttcctgta taatctgaaa atccattata caaaggtttg tttctaaata 3060 aatctaggta ttcgcaacct aatctgcatt ttataagatt atcgatagat gggtgtgcaa 3120 tgcaattctg gttttctatg caatcattag gaccttctat aacaatgtta gtgccaaaga 3180 tactttctat aatcgtatct tcttttacat tacagtaaca ttgatctttt tcagggcatt 3240 tttcaaattt gcttgtaacc aaaaacggac agcctggaac ataaaaacac ccacttaaac 3300 attgggtagt ttgagccata gacatgggca tttgagacaa aatgaccaaa cctattaaga 3360 tttcagtcac aaattttagc aaactaaagc tcagcttagt gttcactatt agatggaacc 3420 attccatgct agtccactta tgtttgttgt agtcatgatc tgtttctttg gataatatgg 3480 gacactctga agaatgttct tttgaagctt tgcttttgtt gcagatgcaa attttagtac 3540 attcatgtgt gattatgcac aaattgccac agttagaaca tttaaatgga aaatatttcc 3600 ataagcaatt tatgagcaac aaaatagggt atgtgatcaa gcctataaga tcataccaga 3660 gaaagagggg tttggttgtc ttgtttacta accaccggat ggggaaatag atcaacaaag 3720 ctatcaatat taatcttatc caagaaaaat tgatgcaggc tgtttgttta taaatgcttt 3780 ttgaatattt gattatgcaa tctctaactc ttttgtttgt ttttggtatt ttagctgatt 3840 tgtcaccgca caagagattg tgctcaccat ccaacatttc ctcagtaaaa gtgatgcttg 3900 ctgatccaga aaaagatatg accttgtgtt ccacattttc accaggcttt tttatcaaat 3960 aacccatgat cttctcaggg ctagtgatgc taacagtgta gggattagca aagtttgatt 4020 tagttatttt gcaatcgcca gataacttca cagtttgtaa tgatactgtt ccattagtag 4080 ggtacgagtt ataagttata ggataattat cttgtgtcag gctttctgaa atgaagaatt 4140 ttgttccaac tgaaaaatgc cttttgttgt caagtttagt aatgggaata accgggactt 4200 tagagaatct ttttggcaga tttaaagaat tgtcacattt ttctaaacct tctgctgaat 4260 cagaaacaca ggaatatatg acaccattat tttccacttg ataataaaca ttataagtgg 4320 ataccccttt tatctcacat tttaatgagg aagcattcaa gcagttgtta ggaagatccg 4380 agacagagat cgttttttgc gtagttggtt cagcaaaaat agggatggtt aattcttctt 4440 ctcgtatctg gcgggttcca ggagtctgag attctagcat cagattagtt aaagtctcca 4500 agatagcctt gcgttgaatt gatgcagcag tgggtacttc attctcagca gaatcatcgt 4560 aaacctcagg atggtctcca cgaattgttt ctactttggc atctgtggct ctgaagatca 4620 agaatgccaa caagacagaa ctcagggcaa ttgtgaaaag actcactttt accactagtt 4680 ctagtagttt taaaattctc atcttagacg tctgctcaga ttataatggt tatatggtta 4740 atttcgagat gtctggatta aggtttttgt ttgcactgat tgctct 4786 //