ID HM015523; SV 1; linear; genomic RNA; STD; VRL; 4791 BP. XX AC HM015523; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Gr5TL1 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4791 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4791 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; 2d61514793b67fe61ccaf23ea4ec9414. XX FH Key Location/Qualifiers FH FT source 1..4791 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Gr5TL1" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2004" FT /proviral FT /note="biotype: T: Tomato Sw-5 resistance breaking" FT /db_xref="taxon:3052585" FT gene 101..1009 FT /gene="Nsm" FT CDS 101..1009 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EWA1" FT /protein_id="ADR66489.1" FT /translation="MLTFFSNKGSSKSAKKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDTSKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKICPNWDSRKQHMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKINNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCVVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1300..4707) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EWA2" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EWA2" FT /protein_id="ADR66490.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVETIRGDHP FT EVYDDSAENEVPTAASIQRKAILETLTNLMLESQTPGTRQIREEESTIPIFAESTTQKT FT ISVSDLPNNCLNASSLKCEIKGVSTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLIGLITYPILLLINCLWKYFPFKCSNCGNLCIITHECTKICICNKSKA FT SKEHSSECPILSKETDHDYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLIILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDTIIESIFGTNIVIEG FT PNDCIENQNCIAHPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSAGLYEA FT KRLGNGIIDSYNRTDKISGMIAGDSLNKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCQNIYDMDKSYRIYSVL FT KSTIVADACISGILGGQCSKITEEVPYENALFQADIQADLHNDGITIGELIAHGPDGHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSITIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKAFSLGKLKIVVDLPSDLFKVAPKRPSITSTRL FT NCNGCLLCGQGLSCILEFFSNLTFSTSISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVVVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRAVLLIAFIFLVIYFCSILTTICKGYVKNKSYKSRSKIVDD FT DDSEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4791 BP; 1556 A; 839 C; 846 G; 1550 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaatta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactt ttttcagcaa 120 taaggggtct tctaagtctg ccaaaaagga tgaaggtcct ttagtttcac tagctaaaca 180 taatggtaat gtagaagtct caaaaccatg gtcttcttct gatgaaaagc ttgctttgac 240 taaagctatg gatacatcca aaggaaagat actgttgaac acagagggaa catcttcctt 300 tggaacctat gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgcaagaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaatgg 420 gaagcagaac gctaataagg tcatcaagat ctgtccaaat tgggacagca gaaaacaaca 480 catgatgatt tccaggattg tgatatgggt ctgccccact ataccaaacc ctacagggaa 540 acttgtggtt gccctagttg atcccaacat gccatctgaa aagcaagtca ttctgaaggg 600 tcaagggaca ataactgatc ctatatgttt tgtcttttat ctgaactggt ctattccaaa 660 aataaacaac actccagaaa actgctgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaaaggggtt tcttttggta gtgtcatgta ttcttggaca aaggagtttt gtgattcacc 780 cagagctgat aaagacaaaa gttgtgtggt tatacctcta aacagagcta ttagagctag 840 atctcaagca ttcattgagg cttgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag agttgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgatagtg ttgctcagtt atcttttgat gaaatatagt acttttaata 1020 ccacttattt aagcttaaat ttctgttaat tttgcatttt aaaatcaaaa aacaaaacaa 1080 aaaacaaaaa acaaaaagag agagaaaaaa acaaaaaaca aaaaaatcaa aaacagaaaa 1140 caaaaacaag ataaggctga aaagccaaac tttggtccga agactctttt tgttgttttt 1200 tgtttatttg tattttttgt ttgttttttg tttattttat atatacataa tctgactaat 1260 gtagaaaatt gaatcaaatt tagcctgtga caagcagcct cagacaaggt gagagaaatc 1320 cataggtggc cttcgtcttg tcattgtatc tttcattaac ataggggctt tgatctcaga 1380 atcatcatca tccactatct tggatctaga tttataagat ttattcttga catatccttt 1440 acaaatggtt gttagaatag aacagaaata aattacaagg aaaatgaatg caataagcaa 1500 taccgctctg atagtatcaa aaaacgagcc aaaataactt gcaatgaaat tgaatgggct 1560 cttaatataa tcccagaaac cccatgctga agaatcagaa ttatattgtt gttcttcatg 1620 agcatactca tcattttgat ctattatgtt ctctggttct tctacgacaa cattattgac 1680 cagaacctcc acagaaatat ctggattgcc ttctggatac aacgtcattt tcttcttgtc 1740 cggattagca gaacaaaaca ttgttatgtt gtatttattt gacccttttt taacagccag 1800 ttgataagta gatagagagc aagcatctat agaaattgaa gtagaaaatg tcaaattcga 1860 gaaaaattct aagatgcaag ataaaccttg accgcataga agacagccgt tgcaatttaa 1920 tcttgttgaa gttatggaag gtctcttagg agcaacttta aaaagatcag atggaagatc 1980 aacgacaatc ttgagtttgc ctaaactgaa agctttttcc aagaaaaaac tagagaaatc 2040 tttgaaacta acaggaatat ctgatatttg ctctaaacca gatctaaatc tgtatgtatc 2100 atatccgcat gttttaatag tgattgattt tttccctatt gctgcacaat cccaagacat 2160 gtcatctcct tctagagttt tcttagtaaa aataggcact ccatcatgag tcaattgtgg 2220 gtgaccaaac attttgacag gatcattcaa gtttgcaata tttccagaat aaatatggcc 2280 atcaggtcca tgagctatca gttcacctat agtgatacca tcattgtgca gatctgcttg 2340 tatatcagct tgaaacaagg cattttcata aggaacctct tcagtgatct ttgagcactg 2400 acctcctaaa ataccagaaa tacaggcatc tgccactata gttgatttta gcactgaata 2460 aattctgtat gatttatcca tgtcatagat attctgacag aatccacatg tagcaccttc 2520 attaattgca aaacaccaag cttcttcaca tccccaataa gaagttggtg ttatacaaaa 2580 atcttggaaa cctgttaaag cttgattttt tctgcaagtg tcacagtttc ctgtacaagt 2640 tgaataaaaa tctgtgtgag tactttggat aggggctgtt gtgtattttt ctgacacttc 2700 ataatgaatt cccacacttt tgatataaat cacaaatttt ttggctgttt ccgaggtctt 2760 atcattcaac atgaatatag tccctcctcc tcctaaaaga gattgttcta tcatgtatct 2820 atatttcccg tctacaacag aatcaaagat caatgattgt ctaggtagaa tgttctctgg 2880 tatgcttgtt tcatttttgt ttagagagtc tcctgcaatc attccagaaa ttttgtctgt 2940 acgattataa gaatctatta taccattccc caatctctta gcttcataca gaccagccga 3000 tgttaaccct aaagagcttc ctgtataatc tgaaaatcca ttatacaaag gtttgtttct 3060 aaataaatct aggtattcgc aacctaatct gcattttata agattatcga tagatgggtg 3120 tgcaatgcaa ttctggtttt ctatgcaatc attaggacct tctataacaa tgttagtgcc 3180 aaagatactt tctataatcg tatcttcttt tacattacag taacattgat ctttttcagg 3240 gcatttttca aatttgcttg taaccaaaaa cggacagcct ggaacataaa aacacccact 3300 taaacattgg gtagtttgag ccatagacat gggcatttga gacaaaatga tcaaacctat 3360 taagatttca gtcacaaatt ttagcaaact aaagctcagc ttagtgttca ctattagatg 3420 gaaccattcc atgctagtcc acttatgttt gttgtagtca tgatctgttt ctttggataa 3480 tatgggacac tctgaagaat gttcttttga agctttgctt ttgttgcaga tgcaaatttt 3540 agtacattca tgtgtgatta tgcacaaatt gccacagtta gaacatttaa atggaaaata 3600 tttccataag caatttatga gcaacaaaat agggtatgtg atcaagccta taagatcata 3660 ccagagaaag aggggtttgg ttgtcttgtt tactaaccac cggataggga aatagatcaa 3720 caaagctatc aatattaatc ttatccaaga aaaattgatg caggctgttt gtttataaat 3780 gctttttgaa tatttgatta tgcaatctct aactcttttg tttgtttttg gtattttagc 3840 tgatttgtca ccgcataaga gattgtgctc accatccaac atttcctcag taaaagtgat 3900 gcttgctgat ccagaaaaag atatgacctt gtgttccaca ttttcaccag gcttttttat 3960 caaataaccc atgatcttct cagggctagt gatgctaaca gtgtagggat tagcaaagtt 4020 tgatttagtt attttgcaat cgccagataa cttcacagtt tgtaatgata ctgttccatt 4080 agtagggtac gagttataag ttataggata attgtcttgt gtcaggcttt ctgaaatgaa 4140 gaattttgtt ccaactgaaa aatgcctttt gttgtcaagt ttagtaatgg gaataaccgg 4200 gactttagag aatctttttg gcagatttaa agaattgtca catttttcta aaccttctgc 4260 tgaatcagaa acacaggaat atatgacacc attattttcc acttgataat aaacattata 4320 agtggatacc ccttttatct cacattttaa tgaagaagca ttcaagcagt tgttaggaag 4380 atccgagaca gagatcgttt tttgcgtagt tgattcagca aaaataggga tggttgattc 4440 ttcttctcgt atctggcggg ttccaggagt ctgagattct agcatcagat tagttaaagt 4500 ctccaagata gccttgcgtt gaattgatgc agcagtgggt acttcattct cagcagaatc 4560 atcataaacc tcaggatggt ctccacgaat tgtttctact ttggcatctg tggctctgaa 4620 gatcaagaat gccaacaaga cagaactcag ggcaattgtg aaaagactca cttttaccac 4680 tagttctagt agttttaaaa ttctcatctt agacgtctgc tcagattata atggttatat 4740 gattaatttc aagatgtctg gattaaggtt tttgtttgca ctgattgctc t 4791 //