ID HM015521; SV 1; linear; genomic RNA; STD; VRL; 4826 BP. XX AC HM015521; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Sala1TL3 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4826 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4826 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; f54d1ee63438a2df94986bf38d23c2b3. XX FH Key Location/Qualifiers FH FT source 1..4826 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Sala1TL3" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2003" FT /proviral FT /note="biotype: T: Tomato Sw-5 resistance breaking" FT /db_xref="taxon:3052585" FT gene 101..1009 FT /gene="Nsm" FT CDS 101..1009 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EW97" FT /protein_id="ADR66485.1" FT /translation="MLTLFGNKRPSKSAGKDEGPLVSLANHNGNVEVSKPWSSSDEKLA FT LTKAMDASKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKIYPTWDSRKQYMMISRIVIWVFPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKMNNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCMVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1335..4742) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EW98" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EW98" FT /protein_id="ADR66486.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP FT EIYDDSAENGVPTAASIQREAILETLTNLMLESRTLGTRQIREEKSTIPISTEPATQKT FT ISVLELPNNCLNASSLKCGIKGISTYNVYYQVENNGVIYFCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVIAFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILVALLIYFPIRWLVN FT KTTKPLFLWYDLMGLITYPVLLLINCLWKYFPFKCSNCGNLCIVTHECTKVCICNKSKA FT SKEHSSECPILSKEADHDYNKHKWTSMEWFHLIVNTKLSLSLLKFVTEILIGLVILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTNKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG FT PNDCIENQNCTARPSIDNLIKCRLGCEYLDLFQNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLDKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYVKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSRITEEVPYENTLFQADIQADLHNDGITIGELIAHGPDSHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSVTIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKSFSLGKLKIVVDLPSDLFKVVPKKPSITSTSL FT NCNGCLLCGQGLSCILEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEILVNNVIIEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVVLLIAFIFLVIYFCSILTSICKGYVKHKSYKSRSKIEDD FT DELEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4826 BP; 1548 A; 876 C; 840 G; 1562 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaacta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactc ttttcggtaa 120 caagaggcct tctaagtctg ccggaaagga tgaaggtcct ttagtttcac ttgctaacca 180 taatggcaat gttgaagtct caaaaccatg gtcttcttct gatgaaaagc ttgctttaac 240 caaagccatg gacgcatcca aaggaaagat actgttgaac actgagggaa catcttcctt 300 tggaacctat gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgctagaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaacgg 420 aaagcaaaat gctaataagg ttatcaagat ctatccaact tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt attccccact ataccaaacc ctacagggaa 540 acttgtggtt gctttagttg atcccaacat gccatctgaa aagcaagtca tcctgaaggg 600 tcaagggaca ataactgatc ctatctgctt tgttttttat ctgaactggt ctattccgaa 660 gatgaacaac accccagaaa actgttgcca gctgcatttg atgtgcagcc aagaatacaa 720 gaaaggggtt tcttttggta gtgtcatgta ttcttggaca aaagagtttt gcgattcacc 780 cagagctgat aaagacaaaa gttgtatggt tatacctcta aacagggcca ttagagctag 840 gtctcaagca ttcattgaag cctgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag aattgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgacagtg ttgctcagtt atcctttgat gaaatatagt tttttaaaaa 1020 cacttattta agcttaaatt tctgtctatt ttgcatttct aatccaaaaa accaaaacaa 1080 aaaacaaaaa caaaaaaaga aaaacaaaca aaaaaatcaa accaaaaaac aaaaacaaaa 1140 taaggctgaa aagccaaact ttggtccgaa gactcttttt gttgtttttt gtttatttgt 1200 attttttgtt tgttgttttt tgtttatttc atacttgctt tttattagtc aatgattgat 1260 tctaaagatt tttatatata taaaatcttg ctaatataga agattgaatc aaatttaatc 1320 tgtgacaagc atcctcagac aaggtgagag aaatccatag gtggccttcg tctcgtcatt 1380 gtatctttca ttaacatagg ggctttgatc tcaagttcat catcatcctc tatcttggat 1440 ctagatttat aagatttatg ctttacatat cctttacaaa tggatgtcag aatagaacaa 1500 aaataaatca caaggaaaat gaatgcaata agcagtacca ctctgatagt atcaaaaaat 1560 gagccaaagt aacttgcaat gaaattgaat ggacttttaa tataatccca gaaaccccat 1620 gcagaagaat cagaattata ttgctgttct tcatgagcat actcatcatt ttgatctatt 1680 atattctctg gttcttctat aataacatta ttaaccaaaa tttccacaga tatatccgga 1740 ttgccttctg gatacagtgt cattttcttc ttgtccgggt tggctgaaca aaacattgtt 1800 atattgtatt tattagatcc ttttttaaca gccagctgat aagtagatag agagcaagcg 1860 tctatagaaa ttgcagtaga aaatgtcaaa tctgagaaaa attctaaaat gcaagataaa 1920 ccttggccgc atagaagaca gccgttgcaa tttaagcttg ttgaagttat ggaaggtttt 1980 ttaggaacaa ctttaaaaag atcagatgga agatcaacta caattttcag tttccctaaa 2040 ctaaaagatt tttccaggaa aaaactagag aaatctttga aactaacagg aatatctgat 2100 atttgctcta aaccagatct aaacctgtat gtgtcatatc cacatgtttt aatagtgact 2160 gatttttttc ctattgctgc acaatcccaa gacatgtcat ctccttctag agttttctta 2220 gtaaaaatag gcactccatc atgggtcaat tgcggatgac caaacatttt cacaggatca 2280 ttcaagtttg caatatttcc agagtaaata tggctgtcag gtccatgagc tattagttca 2340 cctatagtga taccatcatt atgcaaatct gcctgtatat cagcttgaaa caatgtattt 2400 tcataaggaa cttcttcagt aatccttgag cattgacctc ccaaaatacc agaaatacaa 2460 acatctgcta ctatagttga tttgagcact gaataaattc tatatgattt atccatgtca 2520 taaatatttc gacagaatcc gcatgtagca ccttcattaa ttgcaaaaca ccaagcttct 2580 tcacatcccc aataagaagt tggtgttata caaaaatctt ggaaacctgt taaagcttga 2640 tttttcctgc aagtgtcgca gtttcctgta caagtggaat aaaaatccgt atgggtgctt 2700 tggatgggag ctgttgtata tttttctgac acttcataat gaatccccac acttttgaca 2760 taaatcacaa attttttggc tgtttctgag gtcttgtcat ttagcatgaa tatagttcct 2820 cctcctccca aaagagattg ttctatcata tatctatatt tcccgtctac aacagaatca 2880 aagattaatg attgcctggg caggatgttc tctggtatgc ttgtttcatt tttgtctaaa 2940 gagtctcctg caatcattcc agaaattttg tctgtacgat tataggaatc tattatacca 3000 tttctcaatc tcttagcctc atacagacca actgatgtta accctaaaga gcttcctgta 3060 taatccgaaa acccattgta caaaggtttg ttctgaaata aatctaggta ttcgcaacct 3120 aatctgcatt ttataagatt atcaatagat gggcgtgcag tgcaattctg gttctctatg 3180 caatcattag gaccttctat aacaatatta gtgccaaaga tactttctat gatcttgtct 3240 tcttttacat tgcagtaaca ttgatctttt tcagggcatt tctcaaattt gtttgtaacc 3300 aaaaatggac agcctggaac ataaaagcat ccactcaaac attgggttgt ttgagccata 3360 gacatgggca tctgagacaa aatgactaaa cctatcaaaa tttcggtcac aaattttagc 3420 aaactcaagc tcagcttagt gttcactatt agatggaacc attccatgct agtccactta 3480 tgtttgttgt agtcatgatc tgcctctttg gacaatatgg gacactctga agaatgctct 3540 tttgaagctt tgcttttgtt gcaaatgcag actttagtac actcatgtgt gactatgcac 3600 aaattgccgc agttagaaca tttaaatggg aaatatttcc ataagcaatt tatgagcaat 3660 aagacagggt atgtgatcaa gcccataaga tcataccaga gaaagagagg tttagtcgtc 3720 ttgttcacta accatcggat agggaaatag atcaacaaag ctaccaatat caatcttatc 3780 caagaaaaat tgatgcaggc tgtttgctta taaatacttt ttgaatattt gattatgcaa 3840 tctctgactc ttttgtttgt ttttggtatt ttagctgatt tgtcaccgca caagagattg 3900 tgttcaccat ccaacatttc ctcggtaaaa gtgatacttg ctgatccaga aaaagctata 3960 accttgtgtt ccacattttc accaggtttt tttatcaaat aacccatgat cttctcaggg 4020 ctagtgatgc tcacagtata gggatttgca aagtttgatt tagttatttt gcagtcacca 4080 gataacttta cagtttgtaa tgatactgtt ccattagtgg ggtatgagtt gtaagttata 4140 ggataattat cttgtgtcag gctttctgaa atgaagaatt ttgttcctac tgaaaaatgt 4200 cttttgttgt caagtttggt aataggaata actgggactt tggagaatct ctttggcaaa 4260 tttaaagaat tatcacattt ttctaaacct tctgctgaat cagaaacaca gaaatatatg 4320 acaccattgt tttcaacttg ataataaaca ttataagtag atatcccttt tatcccacat 4380 tttaatgagg aagcattcaa gcagttgttg ggaagctcca aaacagagat tgttttttgc 4440 gttgctggct cagtggaaat agggatggtt gatttttctt ctcgtatctg gcgggttcca 4500 agagtccgag attctagcat cagattagtt aaagtctcca agatagcttc gcgttgaatc 4560 gatgcagcag tgggtacccc attctcagca gaatcatcat aaatctcagg atgatctcca 4620 cgaattattt ctactttagc atctgtggct ctgaagatca agaatgccaa caaaacagaa 4680 ctcagggcaa ttgtgaaaag actcactttt accactagtt ctagtagttt tagaattctc 4740 atcttagatg tctacccaga ttacaatggt tgtgtgatta atttcaagat gtctggacta 4800 aggtttttgt ttgcactgat tgctct 4826 //