ID HM015520; SV 1; linear; genomic RNA; STD; VRL; 4825 BP. XX AC HM015520; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Pujol1TL3 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4825 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4825 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; ba6fd09f7c91ccf2d994cd697939276f. XX FH Key Location/Qualifiers FH FT source 1..4825 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Pujol1TL3" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2003" FT /proviral FT /note="biotype: T: Tomato Sw-5 resistance breaking" FT /db_xref="taxon:3052585" FT gene 101..1009 FT /gene="Nsm" FT CDS 101..1009 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EW95" FT /protein_id="ADR66483.1" FT /translation="MLTLFGNKRPSKSAGKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDASKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIRIYPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKMNNTPENCCQLHLMCNQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCMVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSSLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1334..4741) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EW96" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EW96" FT /protein_id="ADR66484.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP FT EIYDDSAENEVPTAASIQREAILETLTNLMLESRTLGTRQIREEKSTIPISTEPATQKT FT ISVLDLPNNCLNASSLKCEIKGVSTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVRLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVIAFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKANKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLMGLITYPVLLLINCLWKYFPFKCSNCGNLCIVTHECTKVCICNKSKA FT SKEHSSECPILSKEADHDYNKHKWTSMEWFHLIVNTKLSLSLLKFVTEILIGLVILSQM FT PMPMAQTTQCLSGCFYVPGCPFLVTNKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG FT PNDCIENQNCIARPSIDNLIKCRLGCEYLDLFQNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLDKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYVKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSRITEEVPYENTLFQADIQADLHNDGITIGELIAHGPDSHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSVTIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKSFSLGKLKIVVDLPSDLFKVVPKKPSITSTSL FT NCNGCLLCGQGLSCILEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEILVNNVIIEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVALLIAFIFLVIYFCSILTSICKGYVKHKSYKSRSKIEDD FT DELEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4825 BP; 1544 A; 873 C; 846 G; 1562 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaacta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactc ttttcggtaa 120 caagaggcct tctaagtctg ccggaaagga tgaaggtcct ttagtttcac ttgctaaaca 180 taatggcaat gttgaagtct caaaaccatg gtcttcttct gatgaaaagc ttgctttaac 240 caaagccatg gacgcatcca aaggaaagat actgttgaac actgagggaa catcttcctt 300 tggaacctat gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgctagaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaacgg 420 aaagcaaaat gctaataagg ttatcaggat ctatccaact tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt atgccccact ataccaaacc ctacagggaa 540 acttgtggtt gctttagttg atcccaacat gccatctgaa aagcaagtca tcctgaaggg 600 tcaagggaca ataactgatc ctatctgctt tgttttttat ctgaactggt ctattccgaa 660 gatgaacaac accccagaaa actgttgcca gctgcatttg atgtgcaacc aagaatacaa 720 gaaaggggtt tcttttggta gtgtcatgta ttcttggaca aaagagtttt gcgattcacc 780 cagagctgat aaagacaaaa gttgtatggt tatacctcta aacagggcca ttagagctag 840 gtctcaagca ttcattgaag cctgcaagct gataattcct aaaggaaaca gcgagaagca 900 gattaaaaaa cagcttaaag aattgagctc aagtcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgacagtg ttgctcagtt atcctttgat gaaatatagt tttttaaaac 1020 acttatttaa gcttaaattt ctgtctattt tgcatttcta atccaaaaaa ctaaaacaaa 1080 aaacaaaaac aaaaaaagaa aaacaaacaa aaaaatcaaa ccaaaaaaca aaaacaaaat 1140 aaggctgaaa agccaaactt tggtccgaag actctttttg ttgttttttg tttatttgta 1200 ttttttgttt gttgtttttt gtttatttca tatttgcttt ttattagtca atgattgatt 1260 ctaaagattt ttatatatat aaaatcttgc taatatagaa gattgaatca aatttaatct 1320 gtgacaagca tcctcagaca aggtgagaga aatccatagg tggccttcgt ctcgtcattg 1380 tatctttcat taacataggg gctttgatct caagttcatc atcatcctct atcttggatc 1440 tagatttata agatttatgc tttacatatc ctttacaaat ggatgtcaga atagaacaga 1500 aataaatcac aaggaaaatg aatgcaataa gcagtgccac tctgatagta tcaaaaaatg 1560 agccaaagta acttgcaatg aaattgaatg gacttttaat ataatcccag aaaccccatg 1620 cagaagaatc agaattatat tgctgttctt catgagcata ctcatcattt tgatctatta 1680 tattctctgg ttcttctata ataacattat taaccaaaat ttccacagat atatccggat 1740 tgccttctgg atacagtgtc attttcttct tgtccgggtt ggctgaacaa aacattgtta 1800 tattgtattt attagatcct tttttaacag ccagctgata agtagataga gagcaagcgt 1860 ctatagaaat tgcagtagaa aatgtcaaat ctgagaaaaa ttctaaaatg caagataaac 1920 cttggccgca tagaagacag ccgttgcaat ttaagcttgt tgaagttatg gaaggttttt 1980 taggaacaac tttaaaaaga tcagatggaa gatcaactac aattttcagt ttccctaaac 2040 taaaagattt ttccaggaaa aaactagaga aatctttgaa actaacagga atatctgata 2100 tttgctctaa accagatcta aacctgtatg tgtcatatcc acatgtttta atagtgactg 2160 atttttttcc tattgctgca caatcccaag acatgtcatc tccttctaga gttttcttag 2220 taaaaatagg cactccatca tgggtcaatt gcggatgacc aaacattttc acaggatcat 2280 tcaagtttgc aatatttcca gagtaaatat ggctgtcagg tccatgagct attagttcac 2340 ctatagtgat accatcatta tgcaaatctg cctgtatatc agcttgaaac aatgtatttt 2400 cataaggaac ttcttcagta atccttgagc attgacctcc caaaatacca gaaatacaaa 2460 catctgctac tatagttgat ttgagcactg aataaattct atatgatttg tccatgtcat 2520 aaatatttcg acagaatccg catgtagcac cctcattaat tgcaaaacac caagcttctt 2580 cacatcccca ataagaagtt ggtgttatac aaaaatcttg gaaacctgtt aaagcttgat 2640 ttttcctgca agtgtcgcag tttcctgtac aagtggaata aaaatccgta tgggtgcttt 2700 ggatgggagc tgttgtatat ttttctgaca cttcataatg aatccccaca cttttgacat 2760 aaatcacaaa ttttttggct gtttctgagg tcttgtcatt tagcatgaat atagttcctc 2820 ctcctcccaa aagagattgt tctatcatat atctatattt cccgtctaca acagaatcaa 2880 agattaatga ttgcctgggc aggatgttct ctggtatgct tgtttcattt ttgtctaaag 2940 agtctcctgc aatcattcca gaaattttgt ctgtacgatt ataggaatct attataccat 3000 ttctcaatct cttagcctca tacagaccaa ctgatgttaa ccctaaagag cttcctgtat 3060 aatccgaaaa cccattgtac aaaggtttgt tctgaaataa atctaggtat tcgcaaccta 3120 atctgcattt tataagatta tcaatagatg ggcgtgcaat gcaattctgg ttctctatgc 3180 aatcattagg accttctata acaatattag tgccaaagat actttctatg atcttgtctt 3240 cttttacatt gcagtaacat tgatcttttt cagggcattt ctcaaatttg tttgtaacca 3300 aaaatggaca gcctggaaca taaaagcatc cactcaaaca ttgggttgtt tgagccatag 3360 gcatgggcat ctgagacaaa atgactaaac ctatcaaaat ttcggtcaca aattttagca 3420 aactcaagct cagcttagtg ttcactatta gatggaacca ttccatgcta gtccacttat 3480 gtttgttgta gtcatgatct gcctctttgg acaatatggg acactctgaa gaatgctctt 3540 ttgaagcttt gcttttgttg caaatgcaga ctttagtaca ctcatgtgtg actatgcaca 3600 aattgccgca gttagaacat ttaaatggga aatatttcca taagcaattt atgagcaata 3660 agacagggta tgtgatcaag cccataagat cataccagag aaagagaggt ttagtcgtct 3720 tgttcactaa ccatcggata gggaaataga tcaacaaagc tatcaatatc aatcttatcc 3780 aagaaaaatt gatgcaggct gtttgcttat aaatactttt tgaatatttg attatgcaat 3840 ctctgactct tttgtttgct tttggtattt tagctgattt gtcaccgcac aagagattgt 3900 gttcaccatc caacatttcc tcggtaaaag tgatacttgc tgatccagaa aaagctataa 3960 ccttgtgttc cacattttca ccaggttttt ttatcaaata acccatgatc ttctcagggc 4020 tagtgatgct cacagtatag ggatttgcaa agtttgattt agttattttg cagtcaccag 4080 ataaccttac agtttgtaat gatactgttc cattagtggg gtatgagttg taagttatag 4140 gataattatc ttgtgtcagg ctttctgaaa tgaagaattt tgttcctact gaaaaatgtc 4200 ttttgttgtc aagtttggta ataggaataa ctgggacttt ggagaatctc tttggcaaat 4260 ttaaagaatt atcacatttt tctaaacctt ctgctgaatc agaaacacag gaatatatga 4320 caccattgtt ttcaacttga taataaacat tataagtaga tacccctttt atctcacatt 4380 ttaatgagga agcattcaag cagttgttgg gaagatccaa aacagagatt gttttttgcg 4440 ttgctggctc agtggaaata gggatggttg atttttcttc tcgtatctgg cgggttccaa 4500 gagtccgaga ttctagcatc agattagtta aagtctccaa gatagcttcg cgttgaatcg 4560 atgcagcagt gggtacctca ttctcagcag aatcatcata aatctcagga tgatctccac 4620 gaattatttc tactttagca tctgtggctc tgaagatcaa gaatgccaac aaaacagaac 4680 tcagggcaat tgtgaaaaga ctcactttta ccactagttc tagtagtttt agaattctca 4740 tcttagatgt ctacccagat tacaatggtt gtgtgattaa tttcaagatg tctggattaa 4800 ggtttttgtt tgcactgatt gctct 4825 //