ID HM015515; SV 1; linear; genomic RNA; STD; VRL; 4828 BP. XX AC HM015515; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Ag1TL3 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4828 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4828 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; 11a16031391ca1dac64427564c7788bb. XX FH Key Location/Qualifiers FH FT source 1..4828 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Ag1TL3" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2003" FT /proviral FT /note="biotype: T: Tomato Sw-5 resistance breaking" FT /db_xref="taxon:3052585" FT gene 100..1008 FT /gene="Nsm" FT CDS 100..1008 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EW85" FT /protein_id="ADR66473.1" FT /translation="MLTLFGNKRPSKSAGKDESPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDASKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKIYPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKMNNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCMVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1337..4744) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EW86" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EW86" FT /protein_id="ADR66474.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP FT EIYDDSAENEVPTAASIQREAILETLTNLMLESRTPGTRQIREEKSTIPISTEPATQKT FT ISVLDLPNNCLNASSLKCEIKGISTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPHTVSITSPEKIMGYLIKKPGENVEHKVIAFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLMGLITYPILLLINCLWKYFPFKCSNCGNLCIVTHECTKVCICNKSKA FT SKEHSSECPILSKEADHDYNEHKWTSMEWFHLIVNTKLSLSLLKFVTEILIGLVILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG FT PNDCIENQNCIARPSIDNLIKCRLGCEYLDLFQNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLDKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHCEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSRITEEVPYENTLFQADIQADLHNDGITIGELIAHGPDSHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSVTIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKSFSLGKLKIVVDLPSDLFKVVPKKPSVTSTSL FT NCNGCLLCGQGLSCILEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISLEVLVNNVIIEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVVLLIAFIFLVIYFCSILTSICKGYVKHKSYKSRSKIEDD FT DEPEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4828 BP; 1548 A; 868 C; 846 G; 1566 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaacta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa tgttgactct tttcggtaac 120 aagaggcctt ctaagtctgc cggaaaggat gaaagtcctt tagtttcact tgctaaacat 180 aatggcaatg ttgaagtctc aaaaccatgg tcttcttctg atgaaaagct tgctttaacc 240 aaagccatgg atgcatccaa aggaaagata ctgttgaaca ctgagggaac atcttccttt 300 ggaacctatg aatctgattc tatcacagaa tcagagggtt atgatctttc tgctagaatg 360 atagtagata caaaccatca tatctcaaac tggaaaaatg atctttttgt tggcaacgga 420 aagcaaaatg ctaataaggt catcaagatc tatccaactt gggacagcag aaaacaatac 480 atgatgattt ccaggattgt gatatgggtc tgccccacta taccaaaccc tacagggaaa 540 cttgtggttg ctttagttga tcccaacatg ccatctgaaa agcaagtcat cctgaagggt 600 caagggacaa taactgatcc tatctgcttt gttttttatc tgaactggtc tattccaaag 660 atgaacaaca ccccagaaaa ctgttgtcag ctgcatttga tgtgcagcca agaatacaag 720 aaaggggttt cttttggtag tgtcatgtat tcttggacaa aagagttttg tgattcaccc 780 agagctgata aagacaaaag ttgtatggtt atacctctaa acagggccat tagagctagg 840 tctcaagcat tcattgaagc ctgcaagttg ataattccta aaggaaacag tgagaagcag 900 attaaaaaac agcttaaaga attgagctca aatcttgaga gatcagttga agaagaagag 960 gaagggattt ctgacagtgt tgctcagtta tcctttgatg aaatatagtt ttttaaaaac 1020 acttatttaa gcttaaattt ctgtctattt tgcattccga atccaaaaaa ccgaaacaaa 1080 aaacaaaaaa caaaaagaga aaaacaaaca aaaaaaatca aaccaaaaaa caaaaacaaa 1140 ataaggctga aaagccaaac tttggtccga agactctttt tgttgttttt tgttttattg 1200 tatttttttg tttgttgttt tttgtttatt tcatatttgc tttttattag tcaatgattg 1260 attctaaaga tttttatata gataaaatct tgctaatata gaagatttaa tcaaatttaa 1320 tctgtgacaa gcatcctcag acaaggtgag agaaatccat aggtggcctt cgtcttgtca 1380 ttgtatcttt cattaacata ggggctttga tctcaggttc atcatcatcc tctatcttgg 1440 atctagattt ataagattta tgctttacat atcctttaca aatggatgtc agaatagaac 1500 agaaataaat cacaaggaaa atgaatgcaa taagcagtac cactctgata gtatcaaaaa 1560 atgagccaaa gtaacttgca atgaaattga atggactttt aatataatcc cagaagcccc 1620 atgcagaaga atcagaatta tattgttgtt cttcatgagc atactcatca ttttgatcta 1680 ttatattctc tggttcttct ataataacat tattaaccaa aacttccaaa gatatatccg 1740 gattgccttc tggatacagt gtcattttct tcttgtccgg gttggctgaa caaaacattg 1800 ttatattgta tttattagat ccttttttaa cagccagctg ataagtagat aaagagcaag 1860 cgtctataga aattgcagta gaaaatgtca aatctgagaa aaattctaaa atgcaagata 1920 aaccttggcc gcatagaaga cagccgttgc aatttaagct tgttgaagtt acggaaggtt 1980 ttttaggaac aactttaaaa agatcagatg gaagatcaac tacaattttc agtttcccta 2040 aactaaaaga tttttccagg aaaaaactag agaaatcttt gaaactaaca ggaatatctg 2100 atatttgctc taaaccagat ctaaacctgt atgtgtcata tccacatgtt ttaatagtga 2160 ctgatttttt tcctattgct gcacaatccc aagacatgtc atctccttct agagttttct 2220 tagtaaaaat aggcactcca tcatgggtca attgcggatg accaaacatt ttcacaggat 2280 cattcaagtt tgcaatattt ccagagtaaa tatggctgtc aggtccatga gctattagtt 2340 cacctatagt gataccatca ttatgcaaat ctgcctgtat atcagcttga aacaatgtat 2400 tttcataagg aacttcttca gtaatccttg agcattgacc tcccaaaata ccagaaatac 2460 aaacatctgc tactatagtt gatttgagaa ctgaataaat tctatatgat ttgtccatat 2520 cataaatatt tcgacagaac ccgcatgtag caccctcatt aattgcaaaa caccaagctt 2580 cttcacatcc ccaataagaa gttggtgtta tacaaaaatc ttggaaacct gttaaagctt 2640 gatttttcct gcaagtgtcg cagtttcctg tacaagtgga ataaaaatcc gtatgagtgc 2700 tttggatggg agctgttgta tatttttctg acacttcaca atgaattccc acacttttga 2760 tataaatcac aaattttttg gctgtttctg aggtcttgtc atttaacatg aatatagttc 2820 ctcctcctcc caaaagagat tgttctatca tatatctata tttcccgtct acaacagaat 2880 caaagattaa tgattgcctg ggcaggatgt tctctggtat gcttgtttca tttttgtcta 2940 aagagtctcc tgcaatcatt ccagaaattt tgtctgtacg attataggaa tctattatac 3000 catttctcaa tctcttagcc tcatacagac caactgatgt taaccctaaa gagcttcctg 3060 tataatccga aaacccattg tacaaaggtt tgttctgaaa taaatctagg tattcgcaac 3120 ctaatctgca ttttataaga ttatcgatag atgggcgtgc aatgcaattc tggttctcta 3180 tgcaatcatt aggaccttct ataacaatat tagtgccaaa gatactttct atgatcttgt 3240 cttcttttac attgcagtaa cattgatctt tttcagggca tttttcgaat ttgcttgtaa 3300 ccaaaaatgg acagcctgga acataaaagc atccactcaa acattgggtt gtttgagcca 3360 tagacatggg catctgagac aaaatgacta aacctatcaa aatttcggtc acaaatttta 3420 gcaaactcaa gctcagctta gtgttcacta ttagatggaa ccattccatg ctagtccact 3480 tatgttcgtt gtagtcatga tctgcctctt tggacaatat gggacactct gaagaatgct 3540 cttttgaagc tttgcttttg ttgcaaatgc agactttagt acactcatgt gtgactatgc 3600 acaaattgcc gcagttagaa catttaaatg ggaaatattt ccataagcaa tttatgagca 3660 ataagatagg gtatgtgatc aagcccataa gatcatacca gagaaagaga ggtttagtcg 3720 tcttgttcac taaccatcgg atagggaaat agatcaacaa agctatcaat atcaatctta 3780 tccaagaaaa attgatgcag gctgtttgct tataaatact ttttgaatat ttgattatgc 3840 aatctctgac tcttttgttt gtttttggta ttttagctga tttgtcaccg cacaagagat 3900 tgtgttcacc atccaacatt tcctcggtaa aagtgatact tgctgatcca gaaaaagcta 3960 taaccttgtg ttccacattt tcaccaggtt tttttatcaa ataacccatg atcttctcag 4020 ggctagtgat gctcacagta tggggattcg caaagtttga tttagttatt ttgcagtcac 4080 cagataactt tacagtttgt aatgatactg ttccattagt ggggtatgag ttgtaagtta 4140 taggataatt atcttgtgtc aggctttctg aaatgaagaa ttttgttcct actgaaaaat 4200 gtcttttgtt gtcaagtttg gtaataggaa taactgggac tttggagaat ctttttggca 4260 aattcaaaga attatcacat ttttctaaac cttctgctga atcagaaaca caggaatata 4320 tgacaccatt gttttcaact tgataataaa cattgtaagt agatatccct tttatctcac 4380 attttaatga ggaagcattc aagcagttgt tgggaagatc caaaacagag attgtttttt 4440 gcgttgctgg ctcagtggaa atagggatgg ttgatttttc ttctcgtatc tgacgggttc 4500 caggagtccg agattctagc atcagattag ttaaagtctc caagatagct tcgcgttgaa 4560 tcgatgcagc agtgggtacc tcattctcag cagaatcatc ataaatctca ggatgatctc 4620 cacgaattat ttctacttta gcatctgtgg ctctgaagat caagaatgcc aacaaaacag 4680 aactcagggc aattgtgaaa aggctcactt ttaccactaa ttctagtagt tttagaattc 4740 tcatcttaga tgtctaccca gattacaatg gttgtgtgat taatttcaag atgtctggat 4800 taaggttttt gtttgcactg attgctct 4828 //