ID HM015513; SV 1; linear; genomic RNA; STD; VRL; 4781 BP. XX AC HM015513; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Gr1NL2 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4781 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4781 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; be3eb4c5b3741313038527c576019426. XX FH Key Location/Qualifiers FH FT source 1..4781 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Gr1NL2" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2003" FT /proviral FT /note="biotype: N: non infecting resistant tomato Sw-5 and FT resistant pepper Tsw" FT /db_xref="taxon:3052585" FT gene 100..1008 FT /gene="Nsm" FT CDS 100..1008 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EW81" FT /protein_id="ADR66469.1" FT /translation="MLTFFSNKGSSKSAKKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDTSKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKICPTWDSRKQYMMVSRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKINNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCVVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1290..4697) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EW82" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EW82" FT /protein_id="ADR66470.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVETIRGDHP FT EVYDDSAENEVPTAASIQRKAILETLTNLMLESQTPGTRQIREEESTIPIFAESTTQKT FT ISVSDLPNNCLNASSLKCEIKGVSTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESQTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVS FT KTTKPLFLWYDLIGLITYPILLLINCLWKYFPFKCSNCGNLCIITHECTKICICNKSKA FT SKEHSSECPILSKETDHDYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLVILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDTIIESIFGTNIVIEG FT PNDCIENQNCIAHPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNHTDKISGMIAGDSLNKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSKITEEVPYENALFQADIQADLHNDGITIGELIAHGPDGHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSITIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLGKAFSLGKLKIVVDLPSDLFKVAPKRPSITSTRL FT NCNGCLLCGQGLSCILEFFSDLTFSTSISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVVVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVILLIAFIFLVIYFCSILTTICKGYVKNKSYKSRSKIVDD FT DDSEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4781 BP; 1553 A; 846 C; 837 G; 1545 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaatta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa tgttgacttt tttcagcaat 120 aaggggtctt ctaagtctgc caaaaaggat gaaggtcctt tagtttcact agctaaacat 180 aatggtaatg tagaagtctc aaaaccatgg tcttcttctg atgaaaagct tgctttgact 240 aaagctatgg atacatccaa aggaaagata ctgttgaaca cagagggaac atcttccttt 300 ggaacctatg aatctgattc tatcacagaa tcagagggtt atgatctttc tgcaagaatg 360 atagtagata caaaccatca tatctcaaac tggaaaaatg atctttttgt tggcaatggg 420 aagcagaacg ctaataaggt catcaagatc tgtccaactt gggacagcag aaaacaatac 480 atgatggttt ccaggattgt gatatgggtc tgccccacta taccaaaccc tacagggaaa 540 cttgtggttg ccctagttga tcccaacatg ccatctgaaa agcaagtcat tctgaagggt 600 caagggacaa taactgatcc tatatgtttt gtcttttatc tgaactggtc tattccaaaa 660 ataaacaaca ctccagaaaa ctgctgtcag ctgcatttga tgtgcagcca agaatacaag 720 aaaggggttt cttttggtag tgtcatgtat tcttggacaa aggagttttg tgattcaccc 780 agagctgata aagataaaag ttgtgtggtt atacctctaa acagagctat tagagctaga 840 tctcaagcat tcattgaggc ttgcaagctg ataattccta aaggaaacag tgagaagcag 900 atcaaaaaac agcttaaaga gttgagctca aatcttgaga gatcagttga agaagaagag 960 gaagggattt ctgatagtgt tgctcagtta tcttttgatg aaatatagta cttttaatac 1020 cacttattta agcttaaatt tctgttaatt ttgcatttta aaatcaaaaa acaaaacaaa 1080 aaacaaaaaa caaaaagaaa aacaaaaaac aaaaaaatca aaaacagaaa acaaaacaaa 1140 ataaggctga aaagccaaac tttggtccga agactctttt tgttgttttt tgtttatttg 1200 tattttttgt ttgttttttg tttattttat atatacataa tctgactaat gtagaaaatc 1260 gaatcaaatt tagcctgtga caagcagcct cagacaaggt gagagaaatc cataggtggc 1320 cttcgtcttg tcattgtatc tttcattaac ataggggctt tgatctcaga atcatcatca 1380 tccactatct tggatctaga tttataagat ttattcttga catatccttt acaaatggtt 1440 gttagaatag aacagaaata aatcacaagg aaaatgaatg caataagcaa tatcactctg 1500 atagtatcaa aaaacgagcc aaaataactt gcaatgaaat tgaatgggct cttaatataa 1560 tcccagaaac cccatgctga agaatcagaa ttatattgtt gttcttcatg agcatactca 1620 tcattttgat ctattatgtt ctctggttct tctacgacaa cattattgac cagaacctcc 1680 acagaaatat ctggattgcc ttctggatac aacgtcattt tcttcttgtc cggattagca 1740 gaacaaaaca tcgttatgtt gtatttattt gacccttttt taacagccag ttgataagta 1800 gatagagagc aagcatctat agaaattgaa gtagaaaatg tcaaatccga gaaaaattct 1860 aagatgcaag ataaaccttg accgcataga agacagccgt tgcaatttaa tcttgttgaa 1920 gttatggaag gtctcttagg agcaacttta aaaagatcag atggaagatc aacgacaatc 1980 ttgagtttgc ctaaactgaa agcttttccc aagaaaaaac tagagaaatc tttgaaacta 2040 acaggaatat ctgatatttg ctctaaacca gatctaaatc tgtatgtatc atatccgcat 2100 gttttaatag tgattgattt tttccctatt gctgcacaat cccaagacat gtcatctcct 2160 tctagagttt tcttagtaaa aataggcact ccatcatgag tcaattgtgg gtgaccaaac 2220 attttgacag gatcattcaa gtttgcaata tttccagaat aaatatggcc atcaggtcca 2280 tgagctatca gttcacctat agtgatacca tcattgtgca gatctgcttg tatatcagct 2340 tgaaacaagg cattttcata aggaacctct tcagtgatct ttgagcactg acctcctaaa 2400 ataccagaaa tacaaacatc tgccactata gttgatttta gcactgaata aattctgtat 2460 gatttatcca tgtcatagat attccgacag aatccacatg tagcaccttc attaattgca 2520 aaacaccaag cttcttcaca tccccaataa gaagttggtg ttatacaaaa atcttggaaa 2580 cctgttaaag cttgattttt tctgcaagtg tcacagtttc ctgtacaagt tgaataaaaa 2640 tctgtgtgag tactttggat aggggctgtt gtgtattttt ctgacacttc ataatgaatt 2700 cccacacttt tgatataaat cacaaatttt ttggctgttt ccgaggtctt atcattcaac 2760 atgaatatag tccctcctcc tcctaaaaga gattgttcta tcatgtatct atatttcccg 2820 tctacaacag aatcaaagat caatgattgt ctaggcagaa tgttctctgg tatgcttgtt 2880 tcatttttgt ttagagagtc tcctgcaatc attccagaaa ttttgtctgt atgattataa 2940 gaatctatta taccattcct caatctctta gcttcataca gaccaaccga tgttaaccct 3000 aaagagcttc ctgtataatc tgaaaatcca ttatacaaag gtttgtttct aaataaatct 3060 aggtattcgc aacctaatct gcattttata agattatcga tagatgggtg tgcaatgcaa 3120 ttctggtttt ctatgcaatc attaggacct tctataacaa tgttagtacc aaagatactt 3180 tctataatcg tatcttcttt tacattacag taacattgat ctttttcagg gcatttttca 3240 aatttgcttg taaccaaaaa cggacagcct ggaacataaa aacacccact taaacattgg 3300 gtagtttgag ccatagacat gggcatttga gacaaaatga ccaaacctat taagatttca 3360 gtcacaaatt ttagcaaact aaagctcagc ttagtgttca ctattagatg gaaccattcc 3420 atgctagtcc acttatgttt gttgtagtca tgatctgttt ctttggataa tatgggacac 3480 tctgaagaat gttcttttga agctttgctt ttgttgcaga tgcaaatttt agtacattca 3540 tgtgtgatta tgcacaaatt gccacagtta gaacatttaa atggaaaata tttccataag 3600 caatttatga gcaacaaaat agggtatgtg atcaagccta taagatcata ccagagaaag 3660 aggggtttgg ttgtcttgct tactaaccac cggataggga aatagatcaa caaagctatc 3720 aatattaatc ttatccaaga aaaattgatg caggctgttt gtttataaat gctttttgaa 3780 tatttgatta tgcaatctct aactcttttg tttgtttttg gtattttagc tgatttgtca 3840 ccgcacaaga gattgtgctc accatccaac atttcctcag taaaagtgat gcttgctgat 3900 ccagaaaaag atatgacctt gtgttccaca ttttcaccag gcttttttat caaataaccc 3960 atgatcttct cagggctagt gatgctaaca gtgtagggat tagcaaagtt tgatttagtt 4020 attttgcaat cgccagataa cttcacagtt tgtaatgata ctgttccatt agtagggtac 4080 gagttataag ttataggata attatcttgt gtctggcttt ctgaaatgaa gaattttgtt 4140 ccaactgaaa aatgcctttt gttgtcaagt ttagtaatgg gaataaccgg gactttagag 4200 aatctttttg gcagatttaa agaattgtca catttttcta aaccttctgc tgaatcagaa 4260 acacaggaat atatgacacc attattttcc acttgataat aaacattata agtggatacc 4320 ccttttatct cacattttaa tgaagaagca ttcaagcagt tgttaggaag atccgagaca 4380 gagatcgttt tttgcgtagt tgattcagca aaaataggga tggttgattc ttcttctcgt 4440 atctggcggg ttccaggagt ctgagattct agcatcagat tagttaaagt ctccaagata 4500 gccttgcgtt gaattgatgc agcagtgggt acttcattct cagcagaatc atcataaacc 4560 tcaggatggt ctccacgaat tgtttctact ttggcatctg tggctctgaa gatcaagaat 4620 gccaacaaga cagaactcag ggcaattgtg aaaagactca cttttaccac tagttctagt 4680 agttttaaaa ttctcatctt agacgtctgc tcagattata atggttatat gattaatttc 4740 aagatgtctg gattaaggtt tttgtttgca ctgattgctc t 4781 //