ID HM015512; SV 1; linear; genomic RNA; STD; VRL; 4830 BP. XX AC HM015512; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Da1NL2 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4830 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4830 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; f76f20ef00d5337fa2cb2e8f6dff8034. XX FH Key Location/Qualifiers FH FT source 1..4830 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Da1NL2" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2003" FT /proviral FT /note="biotype: N: non infecting resistant tomato Sw-5 and FT resistant pepper Tsw" FT /db_xref="taxon:3052585" FT gene 101..1009 FT /gene="Nsm" FT CDS 101..1009 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EW79" FT /protein_id="ADR66467.1" FT /translation="MLTLFSNKRPSKSAGKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDASKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKICPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMSSEKQV FT ILKGQGTITDPICFVFYLNWSIPKMNNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCMVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1339..4746) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EW80" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EW80" FT /protein_id="ADR66468.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP FT EIYDDSAENEVPTAASIQREAILETLTNLMLESRTPGTRQIREEKSTIPISAEPTTQKT FT ISVLDLPNNCLNASSLKCEIKGISTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLMGLITYPVLLLINCLWKYFPFKCSNCGNLCIVTHECTKVCICNKSKA FT SKEHSSECPILSKEADHDYNKHKWTSMEWFHLIVNTKLSLSLLKFVTEILIGLVILSQT FT PMSMAQTTQCLNGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG FT PNDCIENQNCIARPSIDNLIKCRLGCEYLDLFQNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRSGIIDSYNRTDKISGIIAGDSLDKNETSIPENILPRQSLISDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRENQALTGFQDSCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSRITEEVPYENTLFQADIQADLHNDGITIGELIAHGPDSHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSVTIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKSFSLGKLKIVVDLPSDLFKVAPKKPSITSTSL FT NCNGCLLCGQGLSCILEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVIVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVVLLIAFIFLVIYFCSILTSICKGYVKHESYKSRSKIEDD FT DEPEIKAPILMKDAMTRRRPPMDFSHLV" XX SQ Sequence 4830 BP; 1543 A; 869 C; 847 G; 1571 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaacta 60 cattacacaa gctcctctac cttaggctgt tgaactcgaa atgttgactc ttttcagtaa 120 caagaggcct tctaagtctg ctggaaagga tgaaggtcct ttagtttcac ttgctaaaca 180 taatggcaat gttgaagtct caaaaccatg gtcttcttct gatgaaaagc ttgctttaac 240 caaagccatg gatgcatcta aaggaaagat actgttgaac actgagggta catcttcctt 300 tggaacctac gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgctagaat 360 gatagtagat acaaatcacc acatctcaaa ctggaaaaat gatctttttg ttggcaacgg 420 aaagcaaaat gctaataagg ttatcaagat ctgtccaact tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt ctgccccact ataccaaacc ctacagggaa 540 acttgtggtt gctttagttg atcccaacat gtcatctgaa aagcaagtca ttctgaaggg 600 tcaagggaca ataactgatc ctatctgctt tgttttttat ctgaactggt ctattccgaa 660 gatgaacaac accccagaaa actgttgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaaaggggtt tcttttggta gtgtcatgta ttcttggaca aaagagtttt gtgattcacc 780 cagagctgat aaagataaaa gttgcatggt tatacctcta aacagggcca tcagagctag 840 gtctcaagca ttcattgaag cctgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag aattgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgacagtg ttgctcagtt atcctttgat gaaatatagt tctttaaata 1020 tcacttattt aagcttaaat ttctgtctat tttgcattct gaatccgaaa accaaaacaa 1080 aaaacaaaaa acaaaaaaga aaaaacaaac aaaaaaatca aaccaaaaaa caacaaaaac 1140 aaaatatggc tgaaaagcca aactttggtc cgaagactct ttttgtcgtt ttttgtttat 1200 ttgtattttt tttgtttgtt gttttttgtt tatttcatac ttgcttttta ttagtcaatg 1260 attgattcta agattttata tatatataat cctgctaata tagaagattg aatcagattt 1320 aatctatgac aagcatcctc agacaaggtg agagaaatcc ataggtggcc ttcgtcttgt 1380 cattgcatct ttcattaaaa taggggcttt gatctcaggt tcatcatcat cctctatctt 1440 ggatctagat ttataagatt catgctttac atatccttta caaatggatg tcagaataga 1500 acagaaataa atcacaagga aaatgaatgc aataagcagt accactctga tagtatcaaa 1560 aaatgagcca aagtaacttg caatgaaatt gaatggactt ttaatataat cccagaagcc 1620 ccatgctgaa gaatcagaat tatattgttg ttcttcatga gcatactcat cattttgatc 1680 tattatattc tctggttctt ctacaataac attattaacc aaaacttcca cagatatatc 1740 cggattgcct tctggataca gtgtcatttt cttcttgtcc ggattggctg aacaaaacat 1800 tgttatattg tatttattag atcctttttt aacagccagc tgataagtag ataaagagca 1860 agcgtctata gaaattgcag tagagaatgt caaatctgag aaaaattcta aaatgcaaga 1920 taaaccttga ccgcatagaa gacagccatt gcaatttaag cttgttgaag ttatggaagg 1980 ttttttagga gcaactttaa aaagatcaga tggaagatca actacaattt tcagtttccc 2040 taaactaaaa gatttttcca ggaaaaaact agagaaatct ttgaaactaa caggaatatc 2100 tgatatttgc tctaaaccag atctaaacct gtatgtgtca tatccacacg ttttaatagt 2160 gactgatttt ttccctattg ctgcacaatc ccaagacatg tcatctcctt ctagagtttt 2220 cttagtaaaa ataggcactc catcatgggt caattgtgga tgaccaaaca ttttcacagg 2280 atcattcaag tttgcaatat ttccagagta aatatggctg tcaggtccat gagctattag 2340 ttcacctata gtgataccat cattatgcaa atctgcttgt atatcagctt gaaacaatgt 2400 attttcataa ggaacctctt cagtaatcct tgagcattga cctcccaaaa taccagaaat 2460 acaaacatct gctactatag ttgatttaag cactgaataa attctgtatg atttgtccat 2520 atcgtaaata tttcgacaga atccgcatgt agcaccctcg ttaattgcaa aacaccaagc 2580 ttcttcacat ccccaataag aagttggtgt tatacaagaa tcttggaaac ctgttaaagc 2640 ttgattttcc ctgcaagtgt cgcagtttcc tgtacaagtg gaataaaaat ccgtgtgggt 2700 gctttggatg ggagctgttg tatatttttc tgacacttca taatgaattc ccacactttt 2760 gatataaatc acaaattttt ttgctgtttc tgaggtcttg tcatttagca tgaatatagt 2820 tcctcctcct cccaaaagag attgttctat catataccta tatttcccgt ctacaacaga 2880 atcagagatt aatgattgcc tgggcaggat gttctctggt atgctggttt cgtttttgtc 2940 taaagagtct cctgcaatta ttccagaaat tttgtctgta cgattatagg aatctattat 3000 accacttctc aatctcttag cctcatacaa accaactgat gttaacccta aagagcttcc 3060 tgtataatct gaaaacccat tgtacaaagg tttgttctga aataagtcta ggtattcgca 3120 acctaatctg cattttataa gattatcaat agatgggcgt gcaatgcaat tctggttctc 3180 tatgcaatca ttaggacctt ctataacaat attagtgcca aagatacttt ctatgatctt 3240 gtcttctttt acattgcagt aacattgatc tttttcaggg catttttcaa atttgcttgt 3300 aaccaaaaat ggacagcctg gaacataaaa gcatccattc aaacattggg ttgtttgagc 3360 catagacatg ggcgtctgag acaaaatgac taaacctatc aaaatttcgg tcacaaattt 3420 tagcaaactt aagctcagct tagtgttcac tattagatgg aaccattcca tgctagtcca 3480 cttatgtttg ttgtagtcat gatctgcttc tttggacaat atgggacact ctgaagaatg 3540 ctcttttgaa gctttgcttt tgttgcaaat gcagacttta gtacactcat gtgtgactat 3600 gcacaaattg ccgcagttag aacatttaaa tgggaaatat ttccataagc aatttatgag 3660 caataagaca gggtatgtga tcaagcccat aagatcatac cagagaaaga gaggtttagt 3720 cgtcttgttc actaaccatc ggatagggaa atagatcaac aaagctatca atatcaatct 3780 tatccaagaa aaattgatgc aggctgtttg cttataaata ctttttgaat atttgattat 3840 gcaatctctg actcttttgt ttgtttttgg tattttagct gatttgtcac cgcacaagag 3900 attgtgttca ccatccaaca tttcctcagt aaaagtgata cttgctgatc cagaaaaaga 3960 tataaccttg tgttccacat tttcaccagg tttttttatc aaataaccca tgatcttctc 4020 agggctagtg atgctcacag tatagggatt tgcaaagttt gatttagtta ttttgcagtc 4080 accagataac tttacagttt gtaatgatac tgttccatta gtggggtatg agttgtaagt 4140 tataggataa ttatcttgtg tcaggctttc tgaaatgaag aattttgttc ctactgaaaa 4200 atgtcttttg ttgtcaagtt tggtaatagg aataactgga actttagaga atctctttgg 4260 caaatttaaa gaattatcac atttttctaa accttctgct gaatcagaaa cacaggaata 4320 tatgacacca ttgttttcaa cttgataata aacattataa gtagatatcc cttttatctc 4380 acatttcaat gaagaagcat tcaagcagtt gttgggaaga tccaaaacag agattgtttt 4440 ttgcgttgtt ggctcagcag aaatggggat ggttgatttt tcttctcgta tctgacgggt 4500 tccaggagtc cgagattcta gcatcagatt agttaaagtc tccaagatag cttcgcgttg 4560 aatcgatgca gcagtgggta cctcattctc agcagaatca tcataaatct caggatgatc 4620 tccacgaatt atttctactt tagcatctgt ggctctgaag atcaagaatg ccaacaaaac 4680 agaacttaag gcaattgtga aaagactcac ttttaccact agttctagta gttttagaat 4740 tctcatcata gatgtctacc cagattacaa tggttgtgtg attaatttca agatgtctgg 4800 attaaggttt ttgtttgcac tgattgctct 4830 //