ID HM015221; SV 1; linear; viral cRNA; STD; VRL; 6558 BP. XX AC HM015221; XX DT 26-JUL-2011 (Rel. 109, Created) DT 26-JUL-2011 (Rel. 109, Last updated, Version 1) XX DE Rockport virus isolate MSB57412 segment L, complete sequence. XX KW . XX OS Rockport virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus. XX RN [1] RP 1-6558 RX DOI; 10.1128/JVI.02450-10. RX PUBMED; 21632770. RA Kang H.J., Bennett S.N., Hope A.G., Cook J.A., Yanagihara R.; RT "Shared ancestry between a newfound mole-borne hantavirus and hantaviruses RT harbored by cricetid rodents"; RL J. Virol. 85(15):7496-7503(2011). XX RN [2] RP 1-6558 RA Kang H.J., Bennet S.N., Hope A.G., Song J.-W., Cook J.A., Yanagihara R.; RT ; RL Submitted (19-MAR-2010) to the INSDC. RL Tropical Medicine and Medical Microbiology and Pediatrics, John A. Burns RL School of Medicine, University of Hawai`i at Manoa, 651 Ilalo, Honolulu, HI RL 96813, USA XX DR MD5; 3f1af67fe8a8e0bb9cf157646a022c05. DR EuropePMC; PMC3147906; 21632770. DR EuropePMC; PMC3557881; 23171649. DR EuropePMC; PMC4054438; 24741077. XX FH Key Location/Qualifiers FH FT source 1..6558 FT /organism="Rockport virus" FT /segment="L" FT /host="Scalopus aquaticus" FT /isolate="MSB57412" FT /mol_type="viral cRNA" FT /country="USA" FT /collection_date="Oct-1986" FT /db_xref="taxon:1001080" FT CDS 44..6505 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:G0WJH9" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR024378" FT /db_xref="UniProtKB/TrEMBL:G0WJH9" FT /protein_id="AEA11487.1" FT /translation="MDRYREIHQIIKDKIPGEVSAVECLDLLDRLYAVRHDLVDQMIKH FT DWSDNKDRECPISQVLLMAGIPNETLNSMEKKIIPGSPSGQILKSFFKMTPDNYKITAN FT LIEFIEVTVTTDIARGIREKKQKYLPGLEFIEQLLAQETKRGNIKENYKIKFDVVAVKT FT DGSNISTQWPSQRNPGVVQNMRLVQADITFVREHLIKIDERPTLEAMFNLKFHVNVSKT FT RTFHIPNYRPQMLYHPNIDNLVNHCREWLTTEHDFVFKEVKGMSVYSTFQKYESQHMHK FT YNSSKKPRNFLLIQCTIQGPVLESTIASDQCDTRIGLLEVLKLEPLTPTQYLVVDMAHR FT YVNLDRDDIMNFYSSKSHFNSTKNIKEPGTFKLNMSSLSVQSKSLLEKVGKKGDHKGVF FT GTVIDSIDISSQLQINECSRNIESILSQLEMNIGETNTRLAAPAKTTGVDNLLSKFYEN FT EMGKFLLTIIRKTVAWHIGHLIRDITERFNCSFLGLKDQKYWSIHAYDHGGVILFILPS FT KSLEVVGSYIRYIIVFKKGIGLVDEENLDSSLDIDGVTWYVTKVISLDLNRLLALNISF FT EKALLATATWFQYYTEDQGHFPLQHAIRSVYAFHFLLSVCQKMKLCAIFDNLRYLIPSV FT TALYSGFELLIEKFFERPFKTCLEVYIYNIVKSLLISLAQNNKVRFYSKVRLLGLTVDQ FT SSVGASGVYPSLMARVVYKHYRSLISEATTCFFLFEKGLHGNLTEEAKIHLETVEWANK FT FVEKEKKFGKSKLENGYNIAEIGGLIKVEQQLYCQEVVELAAQELNSYLHAKSQVLATN FT ILNKHWDKPYFSQTRNISLKGMSGSLQEDGHLASSVTLIEAIRYLNNSQINPTLIDLYE FT QTKDQPAQARIVRKYQRTEADRGFFITTLPTRVRLEIIEDYYDAIAKVVPEEYISYGGE FT RKILNIQTALEKALRWASGESEIIQANGDTIKLKRKLMYVSADATKWSPGDNSAKFRCF FT TQALYDGLTDDRLKNCVVDALRNIYETEFYMSRKLHRYIDDMDVLSDNVKGFLEFFESK FT ASSKIRGNWLQGNLNKCSSLFGVAVSLLFKHVWQKLFPDLDCFFEFAHHSDDALFIYGY FT LEPLDDGSAWFKYVSQQIQAGGLHWHSVNNEMWKSMFNLHEYILLMGSIRVSPKKTTVS FT PTNAEFLSTFFEGCAVSIPFIKILLGSLSDLPGLGFFDDLAAAQSRCVKAMDLGASPQL FT AQLAIVLCTSKVERLYGTAVGMVNNPTSYLKVPRNQVPIPLGGDGSMSIMELATAGIGM FT ADKNILKKSYQSFLHTKRDNDRYVLGLFKFLMGLSNEVFQHEKLGEFSFIGKVQWKVFT FT PKSKFEFYDQFSQTYIQNWTSQHPAYDYIIPRSRDNLLVYLVRKLNDPSIVTAMTMQSP FT LQLRFRMQAKQHMKVCRLEGQWVTFREVLAAADSFASTYNPTKDDMDLFQTLVNCTFSK FT EYAWKDFLNEVRCEVVTSRQIHRSKVARTFTVRERDQEIQNPITAVIGYKYAQTVEEIS FT DVLDTAIFPDSLSADLQTMKEGVYRELGLDIGIPEVLKRIAPLLYKAGKSRVVIVQGNV FT EGTAESICSYWVKSMSLVKTIKVQPKKEVLKATSLYAAKDNVGFQVDLAASRLCIEVWR FT WCKANEQNVIEWLQALFFEKQTLMDWINRFRQKGVVPVEPEIQCLGLLLYDVLGVKSLL FT QTQANRRAYSGKQYDAYCVQNYNEEKKIYEGDLRVTFNFGLDCARLEIFWDKQEYILET FT SVTQKHVLKIMMEEVTKELLRCGMRFKTEHVTSTRSLVLFKTESGFEWGKPNVPCIVYK FT NCALRTGLRTKNTVNKEFLITTQANGFRAIAQFDEDSPRFLLAHAYHSLKDVRYQAVTA FT VGNVWFRLQNNKLFLNPIISSGLLENFMKGLPAAIPPAAYSLIMNKAKISVDLFMFNEL FT LQNINPKNTLNLDGIEDTSEGYTTVTTLSSRNWSEEMSIVSEDGIDDQESYTIDLDDID FT FEDVNLEEDIEHFLQDESAYTGDLLIQTEDTDIKKIRGVIRILDPIRLIKSWVSKGLAI FT DKVYNPVGIILMTRYMSKTFEFNKIPLSLLNPYDLTEFESVVKGWGECISGRFEEIDEE FT AHRYVENRNLQPEDVLPDSLFSFHYVDILLRRLFPKDSSSSFY" XX SQ Sequence 6558 BP; 2339 A; 987 C; 1315 G; 1917 T; 0 other; tagtagtagg acttccgaga tagagaaaga tcaatcaaaa aaaatggata ggtataggga 60 aatacatcaa ataattaaag ataaaatacc aggagaggtt tcagcagtag aatgtcttga 120 tttgctagat aggctttatg cagttagaca tgatttagta gatcagatga taaagcatga 180 ttggtcagac aataaagaca gagaatgtcc catatcacaa gtgctcttga tggcaggcat 240 tcctaatgag acattaaact ccatggaaaa gaaaataata ccaggtagtc caagtggaca 300 aatattgaag agttttttta agatgacccc agacaactat aaaattacag caaatttgat 360 tgagtttata gaagttacag ttacaacaga catagctcgt ggaattagag aaaagaaaca 420 aaaatactta ccaggtttag aattcataga gcaattgtta gctcaagaga caaagagagg 480 taatataaaa gaaaactata agataaaatt cgatgttgtg gcagtcaaaa ctgatgggtc 540 taatatctca acacaatggc ctagtcagag gaaccctgga gtagtgcaga acatgcgtct 600 agtgcaagca gacattacat ttgtgcgtga acatctgata aagatagatg aaagaccgac 660 actagaagca atgtttaatt taaaatttca tgtgaatgta tcaaaaacga gaacatttca 720 tataccaaat tacaggcctc agatgttgta ccaccctaat attgataatt tggttaacca 780 ctgtagagaa tggttaacaa cagagcatga ctttgtgttt aaggaagtca aaggcatgtc 840 tgtatatagt acatttcaga aatatgaatc acaacacatg cataaatata attcctcaaa 900 aaaaccaagg aactttcttc ttatacagtg cacaattcaa ggacctgtgc tcgagtcaac 960 aatagcctct gatcaatgtg atacgcggat tggactcctt gaggttttaa aactagaacc 1020 actgacacca acgcaatacc tagtagtgga tatggcacat aggtatgtaa atttagaccg 1080 agatgatatc atgaattttt acagctcaaa atcacacttt aatagcacaa aaaatataaa 1140 agaaccaggg acatttaaat tgaatatgtc gtcactttca gtacaatcaa aatcactatt 1200 agagaaagta ggaaaaaaag gtgatcataa aggggtattc ggtacagtaa tcgatagtat 1260 agatatttca agccagctac agataaatga atgctcaaga aacattgaat ctattttatc 1320 acaacttgag atgaacatag gagaaactaa taccagactt gctgcacctg caaaaaccac 1380 aggtgtggat aatctattat caaagtttta tgagaatgaa atgggaaagt ttctgttaac 1440 aattatccgg aaaacagttg cttggcatat cggtcattta ataagagata tcactgaaag 1500 atttaattgt tcattcttgg gcttaaaaga tcaaaaatat tggtcaattc atgcatatga 1560 ccatggtggt gtaattttat ttatattgcc atcaaagtca ctagaagtag tagggtcata 1620 tatccgttat attattgtct ttaaaaaagg aatagggctt gttgatgaag aaaacttaga 1680 ttcttcttta gatattgatg gtgtaacttg gtatgtgaca aaagtaataa gtcttgattt 1740 aaaccgatta ttggccctaa atatatcatt tgaaaaggca cttcttgcta ccgcaacatg 1800 gttccaatat tatactgaag atcagggcca ctttcctctc caacatgcaa ttagatcagt 1860 atatgcattt cattttttgt taagtgtatg tcagaaaatg aaattgtgtg caatatttga 1920 caacttaaga tatctcatcc catcagttac agcattatat tctgggtttg aattgttaat 1980 agagaagttt tttgagaggc cctttaaaac ctgcttagaa gtatacatat acaatatagt 2040 taagtctttg ttaattagcc ttgcacaaaa caataaagtg agattctatt cgaaagttag 2100 actcttaggc cttacagtag atcagtctag tgttggtgca agtggggtat acccatcatt 2160 gatggcaaga gtagtttata aacattacag gagtctgata tcagaagcaa ctacatgttt 2220 tttccttttt gaaaaaggac tgcatggtaa tctgacggaa gaagcaaaaa tccatttaga 2280 aacagtagag tgggctaaca aatttgtaga gaaagaaaag aagttcggaa aatcaaagtt 2340 agaaaatggc tacaatattg cagaaatcgg cgggctgata aaagtagaac agcaattata 2400 ttgtcaggaa gttgttgagc tagctgctca ggaacttaat agctatttac atgctaagtc 2460 ccaagtgtta gccacaaaca tcttaaataa acactgggac aagccatatt tcagtcaaac 2520 aagaaatatt agtctaaaag gaatgtcagg aagtctccag gaagatggtc atctagcatc 2580 aagtgttaca ctaattgaag ccattcgtta cttgaataac tcacaaatta atcctacatt 2640 gattgatctt tatgagcaaa caaaagatca accagcccag gctagaattg tccgaaaata 2700 ccaacggaca gaagcagata gaggtttctt tataacaact ctccctacaa gggtgagact 2760 agagattata gaagattatt atgatgccat agccaaggtt gtaccagaag aatatatatc 2820 ttatggaggt gaaaggaaaa ttcttaatat ccagactgca ctagaaaaag cactgaggtg 2880 ggcatcaggt gaaagtgaaa tcattcaggc aaatggagac accattaagt tgaaaagaaa 2940 gttaatgtat gtaagtgctg atgccacaaa atggtcccca ggtgataact cagcaaaatt 3000 ccgttgtttc acacaagcat tatatgatgg attgacagat gataggttaa aaaactgtgt 3060 tgtggatgct ctaaggaata tttatgaaac agagttctat atgtctagaa aactccatag 3120 atacatagac gatatggatg tcctatcaga taatgtgaaa ggtttcttag agttttttga 3180 aagcaaagca tctagtaaga taagaggtaa ttggttacaa gggaacttga acaagtgttc 3240 atctttattt ggagttgcag tatcattatt atttaagcat gtgtggcaaa aattgtttcc 3300 agaccttgat tgtttttttg agtttgcaca ccattcagat gatgcgctat ttatctatgg 3360 ttacttagag cctttagatg atggtagtgc atggttcaag tatgtgtcgc aacaaataca 3420 agcaggagga ctccactggc attctgttaa taatgaaatg tggaaaagta tgtttaattt 3480 gcatgagtat atactattga tgggatctat tcgtgtctca ccaaaaaaga caacagtttc 3540 accaaccaat gctgaatttc tatcaacatt ttttgaaggc tgtgccgtct ctattccatt 3600 tattaagatc ttattaggtt cactatcaga tcttccagga ttaggttttt tcgatgattt 3660 agcagcagct caaagtcggt gtgtgaaggc gatggattta ggggcatcac ctcagcttgc 3720 tcaacttgca atagttttgt gcacaagtaa agttgaaagg ttatatggaa cagctgtagg 3780 tatggttaat aacccaactt catacttgaa agttcctagg aatcaagtac caattccttt 3840 aggaggtgat ggatcaatgt ctattatgga attagcaaca gcaggtatag gaatggctga 3900 taaaaatatt ttaaaaaaat catatcaatc ctttttacac acaaaacgag ataatgatag 3960 atatgtacta ggtcttttta aatttttaat ggggcttagc aatgaagtat ttcagcatga 4020 aaaactgggt gaattcagct tcattgggaa agtgcaatgg aaggtcttta cacctaaatc 4080 aaaatttgag ttttatgatc aattctctca gacttacata caaaactgga cgtctcaaca 4140 tccagcctat gattacataa tacctaggtc aagagacaat ttactagtat atctagtaag 4200 aaagcttaat gaccctagta ttgtaacagc catgactatg cagtcaccct tacaattaag 4260 gttcagaatg caagcaaaac agcacatgaa agtatgtcgg ttagaagggc agtgggttac 4320 atttagagaa gtcttagcag cagctgacag ttttgcatca acttataatc caacaaagga 4380 tgatatggat ctgtttcaaa cactagtaaa ctgtactttc tcaaaggaat atgcatggaa 4440 agatttttta aatgaagtta gatgtgaagt tgtaacatca aggcaaatac ataggtcaaa 4500 agtggctaga acctttacag tgagagagag agaccaagag atccaaaacc caataactgc 4560 agttattgga tataaatatg cacaaacagt tgaagaaatt agtgatgtgt tggacactgc 4620 catctttcca gattcattgt cagcagatct acaaactatg aaagagggtg tttatagaga 4680 attaggtctg gatataggaa taccagaagt actaaaacgg attgcaccat tactgtataa 4740 agcaggaaaa tcaagggttg taatagtaca aggaaatgta gaaggaactg cagaatcaat 4800 ttgtagttac tgggttaaat caatgtcttt agttaaaaca ataaaagtgc agcctaaaaa 4860 agaagtattg aaagctactt cattgtatgc agctaaggat aatgtgggct ttcaggttga 4920 cctagcagca tcaagattat gcattgaagt gtggaggtgg tgtaaagcta atgaacagaa 4980 tgtcattgaa tggttacaag cacttttttt tgaaaagcaa acattgatgg attggataaa 5040 cagatttagg caaaagggtg tagtcccagt agaaccagaa atacagtgtt taggtttgtt 5100 actgtatgac gttttaggag tgaagagctt attgcaaacc caggcaaata gaagagcata 5160 ttcaggaaaa cagtatgatg catactgtgt ccaaaattat aatgaggaaa agaaaattta 5220 tgaaggtgat ttaagagtga cattcaattt tggtttagac tgtgcaaggc tagaaatttt 5280 ctgggataaa caagagtaca tcctagaaac atcagttaca cagaaacatg tattaaaaat 5340 tatgatggag gaagttacaa aagaattact gagatgtggt atgagattta aaacagaaca 5400 tgtgacatcc acaaggagtc tagtgttgtt taagacagag agtggctttg aatggggaaa 5460 gccaaatgtc ccttgtattg tatataaaaa ttgtgcactg aggacaggtt taagaacaaa 5520 gaatacagta aataaagaat ttctgataac cacacaagct aatgggttta gggcaatagc 5580 tcaatttgat gaagacagcc cacgtttttt acttgcacat gcataccata gtttgaagga 5640 tgttagatat caggcagtta ctgcagtagg aaatgtgtgg ttccgcctac agaataacaa 5700 gttattttta aacccaatca ttagttctgg ccttttagaa aattttatga aaggtttgcc 5760 agcagctatt ccacctgcag catattcttt aatcatgaac aaagcaaaga tatctgttga 5820 tttatttatg ttcaatgaac tattacagaa tataaaccca aaaaacacat taaatttaga 5880 cggaatagaa gatacttcag aaggttatac aacagtcact acactatcga gtagaaattg 5940 gtcagaagaa atgagtatag tttcagaaga tgggattgat gaccaagaaa gttatacaat 6000 agatttggat gacattgatt ttgaagatgt caatttagaa gaagatatag aacacttctt 6060 gcaggatgaa tcagcttata ctggtgacct ccttattcaa acagaagata ctgatataaa 6120 gaagattcgc ggagtaatca gaattcttga cccaattcgc cttataaaaa gttgggtgtc 6180 aaagggacta gctattgata aagtatacaa ccctgttggg atcatattga tgacaagata 6240 tatgtcaaaa acatttgaat tcaacaagat acctttgtct ctattaaatc cttatgacct 6300 aacagagttt gagagtgttg tcaagggttg gggtgagtgt atttctggta gatttgaaga 6360 gattgatgag gaagctcatc gttatgttga aaatcgcaat ttgcagccag aggatgtgct 6420 ccctgattct ttattttctt tccattatgt cgatatatta ttaagaaggt tgtttcctaa 6480 ggattcttct tcatcatttt attaatcttg ccattttagt ttctttaagc agtgctcttt 6540 ttccggagca tactacta 6558 //