ID HM015219; SV 1; linear; viral cRNA; STD; VRL; 3647 BP. XX AC HM015219; XX DT 26-JUL-2011 (Rel. 109, Created) DT 26-JUL-2011 (Rel. 109, Last updated, Version 1) XX DE Rockport virus isolate MSB57412 segment M, complete sequence. XX KW . XX OS Rockport virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus. XX RN [1] RP 1-3647 RX DOI; 10.1128/JVI.02450-10. RX PUBMED; 21632770. RA Kang H.J., Bennett S.N., Hope A.G., Cook J.A., Yanagihara R.; RT "Shared ancestry between a newfound mole-borne hantavirus and hantaviruses RT harbored by cricetid rodents"; RL J. Virol. 85(15):7496-7503(2011). XX RN [2] RP 1-3647 RA Kang H.J., Bennet S.N., Hope A.G., Song J.-W., Cook J.A., Yanagihara R.; RT ; RL Submitted (19-MAR-2010) to the INSDC. RL Tropical Medicine and Medical Microbiology and Pediatrics, John A. Burns RL School of Medicine, University of Hawai`i at Manoa, 651 Ilalo, Honolulu, HI RL 96813, USA XX DR MD5; c91eec779865ec5f4cc8d58ccf7db31f. DR EuropePMC; PMC3147906; 21632770. DR EuropePMC; PMC4054438; 24741077. XX FH Key Location/Qualifiers FH FT source 1..3647 FT /organism="Rockport virus" FT /segment="M" FT /host="Scalopus aquaticus" FT /isolate="MSB57412" FT /mol_type="viral cRNA" FT /country="USA" FT /collection_date="Oct-1986" FT /db_xref="taxon:1001080" FT CDS 58..3468 FT /codon_start=1 FT /product="glycoprotein" FT /db_xref="GOA:G0WJH7" FT /db_xref="InterPro:IPR002532" FT /db_xref="InterPro:IPR002534" FT /db_xref="InterPro:IPR012316" FT /db_xref="UniProtKB/TrEMBL:G0WJH7" FT /protein_id="AEA11485.1" FT /translation="MYTLYLLLYFYQVIIISSRNLIELKLQCPHASHAQHNFVVGYTEL FT VPVSITKVTSMSVDSSCNFDLQQNPNVIQKVTKWTWAKKSSTTGQTNADSTTYQSETTE FT ASLKGICANLILDIHNHISKKTIACYDLSCNQTHCQPTLYVISPNSVCMDVRNCIIGVG FT DQKIMVVFEKTYCITGLLIEGICFNPLQTLLTGYASQSYSVITVPVTCFLHPKKTNSNP FT MKLATELEKLRGKTDCSTNNFQGYYICFLGGYSEPLLLPKSEDHRSAEILSKIVIHYHG FT EDHDIKSYEFSSFRIIGSLTGKVPHTESSDNVQGISYSGPPLYTSLGVLAAKDTPNYVW FT TNGIIFNSNHSTCEKKVLPITWTGYVTLPGKIEKTSSCNIFCTLAGPGADCEAYSEMGI FT FNLSSTTCLINRMHRFRGAEQQIKFLCQRIDSDIVVYCNGQRKIITTKTLVIGQCIYTF FT TSIFSIIPSVAHSLAVELCVPGLHGWATVMLVMTFCFGWLLIPTFTFIILRFLYILTYG FT CSRYNSEAKFKAVLEKVKVEYQKTMGSMVCDICHYECEIAKELDSHKKSCVNGHCPYCM FT NATEATETALQSHFKVCKLTSRFQENLKKSLVPSEQRKGCYRTLVVFRYKSRCYVGLTW FT CLLLLIELIIWAASAEPVLKERGWTDTAHGVGIIPLKSDLELDFSLYSSATFTYKRQLQ FT NPANTEEIVPFQFDVDSQVIHAEIQPLGHWMDGKLNLKTAFHCYGACAKYTYPWQTSHC FT FFEKDYQYETGWGCNPSDCPGVGTGCTACGIYIDKLKPVARAYRIISLSYSRKICVQLG FT TETTCKVISANDCLVSNNIKVCIIGTVTKFSAGDTIVFLGPFESGGIIFKQWCTTTCNF FT GDPGDIMSNADGIKCPEHNGSFRKKCAFATTPLCEYTGNTISGYKRMLATKDSFQSFNL FT TSVHDTVNSLEWIDPDSSLKDHLNLILNRDLSFQDLTDNPCKVDIVTLSVDGAWGSGIG FT FTLQCAVSLTECSTFMTSIKACDMAMCYGSSSVTLSRGQNTVKVTGKGGHSGSSFKCCH FT NEKCSEKGLIAAAPHLDRVSGVGELSSNKVFDDGAPQCGIKCWFVKSGEWLYGILNGNW FT IVFLVLFVILLLSLFLFSVFCPVRKHKSN" XX SQ Sequence 3647 BP; 1217 A; 586 C; 693 G; 1151 T; 0 other; tagtagtaga ctccgcacga agaagcaaaa cattgacgaa gagaatatac aggcaaaatg 60 tatactcttt atttactgtt atatttttat caggtgatta tcataagctc taggaattta 120 atagagttaa aattacagtg tcctcatgct tctcatgcac agcataactt tgttgtaggt 180 tatacagaac tagtacctgt gtcgataaca aaggtaactt cgatgtctgt tgatagttcg 240 tgtaactttg atttacagca aaatccaaat gtcattcaaa aagttacaaa atggacttgg 300 gcaaaaaaat catcaactac tggacaaaca aatgctgatt caaccacata tcaatctgag 360 acaactgaag cttcactaaa gggaatctgt gccaacctaa tactagatat acataaccac 420 atatctaaga agacaatagc atgttatgac ctatcatgca accaaacaca ttgccaacca 480 acactctatg ttatatcacc aaattctgtt tgtatggatg taagaaattg tattatagga 540 gtaggagatc agaagatcat ggtggtattt gaaaaaacat actgcattac tggtttactt 600 attgaaggca tttgttttaa cccactgcaa acactattaa ctggttatgc ttcacaaagc 660 tatagtgtaa taacagttcc ggtcacatgt tttttacatc ccaaaaaaac aaacagtaac 720 ccaatgaaac ttgctacaga attagaaaag ttaagaggca aaacagattg tagcacgaac 780 aattttcaag gatattacat ttgttttcta ggtggttatt cagaaccttt actcttacct 840 aaaagtgaag atcatagatc ggctgagatt ttaagtaaga ttgtgattca ttatcatggt 900 gaagatcatg acattaagag ttatgaattt agcagcttta gaataattgg aagtttgact 960 ggcaaagtac cccatacaga atcatcggat aatgtccaag gtataagtta ttcaggacca 1020 ccattatata cttcattagg cgttcttgca gcaaaagata caccaaatta tgtatggaca 1080 aatggtatta tctttaattc aaatcattct acatgtgaga agaaagtact tcctataaca 1140 tggacgggtt atgtgacttt accaggaaaa atcgagaaaa cgtctagttg taacattttc 1200 tgcacattag caggaccagg agctgattgt gaagcttatt ctgaaatggg catattcaac 1260 ttaagctcaa ctacatgttt aattaataga atgcatagat ttaggggggc agagcaacaa 1320 attaaattct tgtgtcaacg tattgattca gatattgttg tgtattgtaa tggtcagcgg 1380 aaaatcataa ctacaaagac tttggtaata ggtcagtgta tatatacatt tacaagtatt 1440 ttttcaatta tcccatcagt tgcacactcg ctggctgtag agttatgtgt gccaggtctt 1500 catggttggg caaccgtcat gcttgttatg acattttgtt ttggatggct cttaatacca 1560 acatttacat ttatcatatt acggttttta tatattttaa catatggctg ttcaagatac 1620 aactctgaag cgaaatttaa agctgtgtta gaaaaagtca aagttgaata tcaaaaaaca 1680 atgggttcaa tggtatgtga tatatgtcat tatgagtgtg aaattgcaaa agaactagac 1740 tcccataaaa agagctgtgt gaatggtcat tgcccttact gtatgaatgc tactgaagca 1800 actgaaacag cacttcaaag tcatttcaaa gtttgcaaac taacatctag gttccaggaa 1860 aatttaaaaa aatcacttgt tccatcagaa cagagaaaag gatgttatag aacattggta 1920 gtttttcgat ataagagccg atgttatgta ggtctaacct ggtgtttatt gttactcata 1980 gaattaatca tttgggctgc aagtgctgaa ccagtattga aagaaagggg ctggactgat 2040 actgcacatg gagtgggcat tataccgttg aagtctgatt tagaacttga cttctcatta 2100 tactcatctg ctacttttac ttataaaagg caacttcaaa atccagccaa tacagaagaa 2160 attgtaccct tccagtttga tgttgattcc caagtaattc acgctgaaat tcaaccattg 2220 ggtcactgga tggatggaaa attaaattta aaaactgcat tccattgtta tggagcttgc 2280 gcaaagtaca catatccatg gcagactagt cattgtttct ttgaaaaaga ttatcaatat 2340 gaaactggat ggggatgtaa cccaagtgat tgcccaggag ttggtacagg ttgtacagca 2400 tgtggcattt atattgataa attaaagcct gtggcaaggg catatagaat tatttctttg 2460 tcttacagca gaaagatttg tgtgcaatta gggacagaaa caacatgtaa agttataagt 2520 gctaatgact gtttggtgag taataatatc aaggtttgca taataggaac tgtaactaag 2580 ttttctgcag gggatactat tgtattttta ggcccatttg aaagtggagg aattatattt 2640 aaacaatggt gcactactac atgcaatttt ggagaccctg gagacatcat gtcaaatgca 2700 gatggtataa aatgtccaga gcataatggt tcattcagaa agaaatgtgc atttgcaacg 2760 accccactgt gtgagtatac aggaaacact atctctgggt ataaaagaat gctggcaaca 2820 aaagattcct ttcaatcatt caacttaact tcagtacatg atacagttaa tagtctagaa 2880 tggatagacc cagacagttc attaaaagac catttaaatc taattttaaa tcgggattta 2940 tcattccaag acttaacaga caatccatgc aaggttgata ttgttacttt atcagtagat 3000 ggtgcatggg gttcaggaat tggtttcaca ctacaatgtg ctgtaagttt gactgaatgt 3060 agcacattta tgacatctat taaagcatgt gatatggcga tgtgttatgg gtcaagttca 3120 gttacgttat ctcgtggcca gaacactgta aaagttacag gaaaaggtgg tcattctgga 3180 tcgtcattta aatgctgtca taatgaaaaa tgttctgaaa aaggcctaat tgcggctgca 3240 cctcatttag atcgagtctc cggtgtaggt gaattgagtt ctaataaggt ttttgacgat 3300 ggtgcaccac aatgtggaat aaagtgttgg tttgttaaat ctggagaatg gttgtatggt 3360 atcctaaatg gaaattggat agttttccta gtcttgtttg tgattttgtt attgtcatta 3420 tttctcttta gtgtgttttg cccggtaaga aagcataaat caaattgaat tataaactaa 3480 tgctttaata tttgctttac ataaatctaa cccatgatca ttactaattc tcatactata 3540 ttaagtactg acactaatcc ttattaacaa aaaaaactaa cactttatga catctttact 3600 taacaccagc tttatctggg cttttgttcc tgcggagcct actacta 3647 //