ID   HM008711; SV 1; linear; genomic RNA; STD; VRL; 1664 BP.
XX
AC   HM008711;
XX
DT   09-MAY-2010 (Rel. 104, Created)
DT   15-OCT-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Bermuda grass mosaic virus isolate Shiraz polyprotein gene, partial cds.
XX
KW   .
XX
OS   Bermuda grass mosaic virus
OC   Viruses; Riboviria; Potyviridae.
XX
RN   [1]
RP   1-1664
RX   DOI; 10.1007/s00705-010-0745-6.
RX   PUBMED; 20607318.
RA   Hosseini A., Koohi Habibi M., Izadpanah K., Mosahebi G.H.,
RA   Rubies-Autonell C., Ratti C.;
RT   "Characterization of a filamentous virus from Bermuda grass and its
RT   molecular, serological and biological comparison with Spartina mottle
RT   virus";
RL   Arch. Virol. 155(10):1675-1680(2010).
XX
RN   [2]
RP   1-1664
RA   Hosseini A., Kouhi Habibi M., Izadpanah K., Mosahebi G.H.,
RA   Rubies-Autonell C., Ratti C.;
RT   "Bermuda grass mosaic virus isolate Shiraz";
RL   Unpublished.
XX
RN   [3]
RP   1-1664
RA   Hosseini A., Kouhi Habibi M., Izadpanah K., Mosahebi G.H.,
RA   Rubies-Autonell C., Ratti C.;
RT   ;
RL   Submitted (17-MAR-2010) to the INSDC.
RL   Department of Plant Protection, University of Tehran, University College of
RL   Agriculture & Natural Resources, Karaj, Tehran 71758, Iran
XX
DR   MD5; 28b82c537e06856210e853407318e31a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1664
FT                   /organism="Bermuda grass mosaic virus"
FT                   /host="Cynodon dactylon (Bermuda grass)"
FT                   /isolate="Shiraz"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran:Shiraz"
FT                   /collection_date="Jul-2008"
FT                   /db_xref="taxon:741977"
FT   CDS             <1..1545
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains partial NIb protein and complete coat
FT                   protein"
FT                   /db_xref="GOA:D6QTC0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:D6QTC0"
FT                   /protein_id="ADG01384.1"
FT                   /translation="GNNSGQPSTVVDNTLMVIISMEYTKLKLNIPDDDIVYFCNGDDLA
FT                   IAIKPTLAPNLDKFSEIFSTLGLNYDFSNIVADRTQISFMSHRGIMHDDIYIPKLEPER
FT                   IVAILQWNRTNEFEHELDALNAALIESYGYPQLEHYIRVYYNWLLEQHPYNTLATVGKA
FT                   PYISKLALRNLYDGKGVTNEEVELYKSAMKHTPVFDTLELQAGETSVKPTLSGLTDAPS
FT                   VETPAAKKTRLLANKAIKEKFKTDSDAWDTAHPTDKVERPSNATLTPEETAAGTEPAVP
FT                   QNDLGDGKHGDGVFKTPKLEIDKRQIRIPKVGGKAAINTKALNSLTATSYDLSGKKSTK
FT                   RQFENWYNGAKKDYGLDDDAFQLLVTAFVVWCIHNGTSDKMTGNFKAMFNDEEEDYPVG
FT                   PFIHHANPTLRQIMMHYSDVAEQYIVDQNRKHKFMPRWGMQRNILDYNYAQYAFDFYEV
FT                   TDRTPPIARNLIMNTKAAAVRNGGNKILGLDGNVTLKPQELAHHTVPDREVARITN"
XX
SQ   Sequence 1664 BP; 552 A; 361 C; 338 G; 413 T; 0 other;
     gggaataata gtgggcagcc ctcaacggtg gtagataaca cattgatggt aatcatttcc        60
     atggaataca caaagcttaa acttaacatc cctgacgatg atatagtgta tttttgcaac       120
     ggagacgatc ttgcgatagc tatcaaacca accttagctc ccaatctgga caaatttagt       180
     gaaatcttta gcacacttgg tctgaattat gacttctcca atatagttgc cgaccgtaca       240
     caaattagtt ttatgtcaca tcggggaata atgcatgacg acatatatat accgaaactt       300
     gaacccgagc gtattgtggc aattctgcag tggaatagaa caaatgaatt cgaacacgaa       360
     ctcgatgcct taaatgcagc actcatcgaa tcttatggat atccacaact agaacattat       420
     atacgagttt actataactg gttgcttgaa cagcatcctt ataatacatt ggcaacagtt       480
     ggtaaagctc catacatttc aaaattagcc ctgagaaatt tgtatgatgg aaaaggggtg       540
     actaacgaag aagttgaatt gtacaaaagt gctatgaaac acacaccagt gtttgacacc       600
     cttgaattgc aagcaggaga aacatctgtc aaaccaactc tcagtggtct cacagacgca       660
     ccatcggtag aaacgccagc ggccaagaaa acaagattat tggccaacaa agcaataaaa       720
     gagaagttca aaactgatag tgatgcatgg gacacagctc atccgaccga taaggtagaa       780
     cgcccgagca atgccacgct cactcctgaa gaaactgcag ctggcacaga acctgcagta       840
     ccccagaatg acctcggaga cggaaaacat ggggacgggg tttttaaaac gcccaaatta       900
     gaaattgata aacgtcaaat acgtattcca aaggttggag gcaaagctgc cataaacact       960
     aaagctttaa attctttaac cgcaacctca tacgatcttt ctggtaagaa atcaacaaaa      1020
     cgtcaatttg agaactggta taatggtgca aagaaagatt atggtttaga cgatgacgca      1080
     tttcagcttt tggtaacagc attcgttgtt tggtgtatcc acaatgggac gtcagataaa      1140
     atgactggga atttcaaggc aatgtttaat gatgaagaag aagactatcc agtaggccct      1200
     tttatacacc atgcgaatcc aacactgcgt caaatcatga tgcattactc agatgtcgct      1260
     gaacaataca ttgttgatca aaaccgtaaa cacaagttta tgccacgctg gggcatgcaa      1320
     cgcaatatac tagattataa ttatgcccag tatgcgtttg acttttatga agtcacggat      1380
     cgtacacctc caattgcgcg caacctcatt atgaacacta aagcagcagc agtgcgcaat      1440
     ggtggcaata agatccttgg tctcgatggc aacgttacac ttaaacccca ggaacttgcc      1500
     catcacactg tcccagatcg cgaagttgcc cgtattacga actaaatgct atataggtac      1560
     tataaataac ctatgtcgct ccaacacaat gcggtcttac cgcttgcata tgtgaccatc      1620
     atccgtagtg tggatttcca cgaagcgtat gggggctcat atcc                       1664
//