ID HM007121; SV 1; circular; genomic DNA; STD; VRL; 2788 BP. XX AC HM007121; XX DT 01-FEB-2012 (Rel. 111, Created) DT 27-APR-2025 (Rel. 144, Last updated, Version 2) XX DE Chilli Leaf curl Vellanad virus [India/Vellanad/2008] clone pChVelK52 DE segment DNA-A, complete sequence. XX KW . XX OS Chilli leaf curl Vellanad virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2788 RA Singh A.K., Chattopadhyay B., Chakraborty S.; RT "Molecular diversity of begomoviruses causing leaf curl disease of chillies RT in India"; RL Unpublished. XX RN [2] RP 1-2788 RA Singh A.K., Vinothkumar R., Chattopadhyay B., Chakraborty S.; RT ; RL Submitted (17-MAR-2010) to the INSDC. RL Molecular Virology Laboratory, School of Life Sciences, Jawaharlal Nehru RL University, New Delhi, Delhi 110067, India XX DR MD5; 083a63aa3b185bb8dc403761ff8202a6. XX FH Key Location/Qualifiers FH FT source 1..2788 FT /organism="Chilli leaf curl Vellanad virus" FT /segment="DNA-A" FT /host="chilli" FT /isolate="India/Vellanad/Chilli/2008" FT /mol_type="genomic DNA" FT /geo_loc_name="India: Vellanad" FT /collection_date="Nov-2008" FT /clone="pChVelK52" FT /note="submitted name=Chilli leaf curl Vellanad virus FT [India/Vellanad/2008]" FT /db_xref="taxon:2050929" FT gene 183..530 FT /gene="AV2" FT CDS 183..530 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /note="suppressor of RNAi" FT /protein_id="AEA76856.1" FT /translation="MWDPLVNDFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARLEGTPPSQLRQPIFQSCCCPHCPRHKSKGMGQQAHES FT EAQDVQDVQKP" FT gene 343..1113 FT /gene="AV1" FT CDS 343..1113 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="nucleoprotein; responsible for encapsidation of FT viral DNA and insect transmission" FT /protein_id="AEA76857.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYSSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFESRHDVTHVGKVMCISDVTRGSGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDRPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVRKFVRVNNYVIYNQQEAGKYENH FT QENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1110..1514) FT /gene="AC3" FT CDS complement(1110..1514) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /note="replicational enhancer protein; enhances viral FT replication" FT /protein_id="AEA76860.1" FT /translation="MDSRTGERITAALATNGVYIWQVPNPLYFTILNHDSRPFNSTTDL FT ISLRVQFNHNLRRVLGIHKCFLTFRIWTTLQPRTGHFLRVFKTQLLRYLDSLGVVSVNN FT VIRGVDHVLWNVLTGTVSVQQFSEIKYNVY" FT gene complement(1255..1659) FT /gene="AC2" FT CDS complement(1255..1659) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /note="transcriptional activator protein; transactivates FT virion sense ORFs and suppressor of RNAi" FT /protein_id="AEA76859.1" FT /translation="MQSSSPSKAHSTQVPIKVLHRQYKKTNRRKRVDLECGCSYYLGID FT CRNHGFTHRGTHHCSSGNEWRLYLAGPKSPIFHDPQPRQPAIQLDHRPHIITGAVQPQP FT SESVGDTQMFSNLPNLDDLTASDWSFLKGL" FT gene complement(1556..2647) FT /gene="AC1" FT CDS complement(1556..2647) FT /codon_start=1 FT /gene="AC1" FT /product="Rep" FT /note="replicase; responsible for viral replication" FT /protein_id="AEA76858.1" FT /translation="MPRANRFQVLAKNIFLTYPKCPIPKEQMLELLKGISCPSDKLFIR FT ISQEKHQDGSLHIHALIQFKGKAQFRNPRHFDVTHPNTSSQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGSFQVDGRSARGGQQTANDAAAEALNSGSADAALAIIREKLPKDFIFQYH FT NLKTNLDRIFAPPREVFVCPFLSSSFDQVRDELDEWAAVNVVSAAARPNRPMSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALRNWALKNAVFVTLQGPL FT YSGTNKGSPQTIQEDQPEETGGP" FT gene complement(2233..2490) FT /gene="AC4" FT CDS complement(2233..2490) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="involved in symptom expression and suppressor of FT RNAi" FT /protein_id="AEA76861.1" FT /translation="MGLCISTPSSSSRVKPSSETPDISMSLTLTPHPNSIQTSRELSPP FT PMSSPTSRRTEITSTGVVFRSMDDLLEEVSRQLMMLQQRP" XX SQ Sequence 2788 BP; 756 A; 578 C; 649 G; 805 T; 0 other; accggatggc cgcgcccatt tctgtcattg tcatgggacc cacgtgtgtc ggctttggct 60 tttgtctttt gcatgggccc caccactaac taatgttaac caatcacagc cccccgtcaa 120 agcttaatta ttgaagtggg cccctatata aacttgggga cgaagtttca attttattca 180 agatgtggga ccccctagtc aatgattttc ctgaaactgt acatggtttc aggtgtatgc 240 ttgcaataaa atacttgcaa ttagtagaaa atacatactc accagatacc ttggggtacg 300 atttaattag ggatttaatc tcagttatta gggctagaaa ttatgtcgaa gcgaccagca 360 gatataatca tttccacgcc cgcctcgaag gtacgccgcc gtctcaactt cgacagccca 420 tattccagtc gtgctgctgc ccccattgtc cgcgtcacaa aagcaagggc atgggccaac 480 aggcccatga atcggaagcc caggatgtac aggatgtaca gaagccctga tgttcccaaa 540 ggatgtgaag gcccatgtaa ggtccagtct tttgagtcca ggcatgacgt gacccacgta 600 gggaaggtta tgtgtattag tgatgttaca cgaggtagtg ggcttaccca tagagtaggt 660 aaacgttttt gtgtcaagtc agtgtatgtg ttaggtaaaa tttggatgga tgaaaatatt 720 aaaacgaaga accacactaa cagtgtgatg ttcttccttg tccgtgatag aagacctgtg 780 gatagacccc aggattttgg agaggttttc aacatgtttg acaatgaacc cagtaccgca 840 accgtgaaga atgtacatcg tgatcgatat caagtattga ggaaatggca tgcaactgtt 900 accggaggtc agtacgcatc gaaggagcag gcattagtta ggaagtttgt tagggttaat 960 aattatgtaa tttataacca gcaggaagct ggtaagtatg agaatcatca ggagaatgcg 1020 ttaatgttgt atatggcatg tacgcatgcc tcaaaccccg tgtatgctac tttgaagata 1080 cggatctact tctacgattc agtatcaaat taataaacgt tatattttat ttcactgaat 1140 tgttgtacac ttacagtacc cgttagtaca ttccacaata catgatcaac tcccctaatt 1200 acattattaa cactaacaac tcctaaacta tctaaatatc gtagaagttg ggttttaaag 1260 acccttaaga aatgaccagt ccgaggctgt aaggtcgtcc aaattcggaa ggttagaaaa 1320 catttgtgta tccccaacac tctccgaagg ttgtggttga actgcacccg taatgatatg 1380 aggtctgtgg tcgagttgaa tggccggctg tcgtggttga ggatcgtgaa atatagggga 1440 tttgggacct gccagatata gacgccattc gttgccagag ctgcagtgat gcgttcccct 1500 gtgcgtgaat ccatgattcc tgcagtcgat acccaggtag tatgaacaac cacactcaag 1560 gtccacccgt ttcctccggt tggtcttctt gtattgtctg tggagaacct ttattggtac 1620 ctgagtagag tgggccttgg agggtgacga agactgcatt ctttagtgcc caattcctta 1680 gtgcggaatt tttgtcttcg tccaagaact ctttatagct ggaattgggc cctggattgc 1740 agaggaagat agtgggaatg ccccctttta tttgaactgg ctttccgtat tttgtgttgg 1800 actgccagtc cctttgggcc cccatgaatt ctttaaagtg ttttaggtag tgggggtcga 1860 cgtcatcaat gacgttatac caggcatcat ttgaatatat ttttgggctt aaatccaaat 1920 ggccacataa gtaattatgt ggacccaaag acctagccca cattgttttg ccggtccgac 1980 tatcaccctc taacacaata ctcatgggtc tattcggccg cgcagcggca ctgacaacat 2040 tcacggcagc ccattcgtca agttcatcac gaacttgatc aaaggaagaa cttaaaaaag 2100 gacaaacaaa aacctctctt ggaggtgcaa aaatcctatc taaattggtt ttcaaattat 2160 gatattgaaa aataaaatct ttagggagtt tctccctaat gattgccaga gcggcatcag 2220 cggagcctga atttagggcc tctgctgcag catcattagc tgtctgctga cctcctctag 2280 cagatcgtcc atcgacctga aaactacccc agtcgatgta atctccgtcc ttctcgatgt 2340 aggacttgac atcggaggag gacttagctc cctggaagtt tggatggaat tgggatgagg 2400 tgttagggtg agtgacatcg aaatgtctgg ggtttcggaa ctgggcttta cccttgaact 2460 ggatgagggc gtggatatgc agagacccat cttgatgttt ttcttgagaa atccggataa 2520 ataatttatc tgatgggcat gaaatgccct taagtagttc taacatttgt tccttaggta 2580 tggggcattt tgggtatgtt aagaaaatat ttttggctaa aacttgaaat ctgtttgcac 2640 gtggcatttt gtattggatg ctctacaaac tctgtgggaa ttggatgctt tggatgccta 2700 tatatatgaa gcttccaaat ggcataaacg taatttacgg gaaatttcca atctatttcc 2760 cgccaaaagc ggccatccgt ataatatt 2788 //