ID HM007097; SV 1; circular; genomic DNA; STD; VRL; 2760 BP. XX AC HM007097; XX DT 11-APR-2012 (Rel. 112, Created) DT 11-APR-2012 (Rel. 112, Last updated, Version 1) XX DE Pepper leaf curl Bangladesh virus-India [India/Ghazipur/2007] clone DE pChGhB37 segment DNA-A, complete sequence. XX KW . XX OS Pepper leaf curl Bangladesh virus-India [India/Ghazipur/2007] OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2760 RA Singh A.K., Chattopadhyay B., Chakraborty S.; RT "Molecular diversity of begomoviruses causing leaf curl disease of chillies RT in India"; RL Unpublished. XX RN [2] RP 1-2760 RA Singh A.K., Yadav T., Chattopadhyay B., Chakraborty S.; RT ; RL Submitted (16-MAR-2010) to the INSDC. RL Molecular Virology Laboratory, School of Life Sciences, Jawaharlal Nehru RL University, New Delhi, Delhi 110067, India XX DR MD5; f583151646ef357208f9a992501e97f2. XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Pepper leaf curl Bangladesh virus-India FT [India/Ghazipur/2007]" FT /segment="DNA-A" FT /host="chilli" FT /isolate="India/Ghazipur/Chilli/2007" FT /mol_type="genomic DNA" FT /country="India:Ghazipur" FT /collection_date="Nov-2007" FT /clone="pChGhB37" FT /db_xref="taxon:1000672" FT gene 147..503 FT /gene="AV2" FT CDS 147..503 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /note="suppressor of RNAi" FT /db_xref="GOA:H9LD18" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H9LD18" FT /protein_id="AEA76760.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARLEGTPPSQLRQPIYQPCCCPHCPRHQSKSMGQQADEQ FT EAQDVQDVQKPRCA" FT gene 307..1077 FT /gene="AV1" FT CDS 307..1077 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="nucleoprotein; responsible for encapsidation of FT viral DNA and insect transmission" FT /db_xref="GOA:H9LDD6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H9LDD6" FT /protein_id="AEA76761.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYTSRAAVPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1080..1484) FT /gene="AC3" FT CDS complement(1080..1484) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /note="replicational enhancer protein; enhances viral FT replication" FT /db_xref="GOA:H9LCH8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H9LCH8" FT /protein_id="AEA76764.1" FT /translation="MDSRTGEPITAAQAENSVLIWEITNPLYFKIIEHHHRPFLRNQDI FT ITVQVRFNHNLRKALGIHKCFLTFRIWTTLQPQTGHFLRVFRTQVLKFLNNFAVISINN FT VIRAVDHVLWNVLAQTIHVQSSNIIKFNLY" FT gene complement(1225..1629) FT /gene="AC2" FT CDS complement(1225..1629) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /note="transcriptional activator protein; transactivates FT virion sense ORFs and suppressor of RNAi" FT /db_xref="GOA:H9LE63" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H9LE63" FT /protein_id="AEA76763.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKRGTRRRRVDLDCGCSYFIALR FT CHGYGFTHRGTHHCSSSREFRAYLGDNKSPVFQDNRAPPPAIPEEPRHHNSPSTVQSQP FT EKSVGDTQMFSNLPNLDDLTASDWSFLKGI" FT gene complement(1532..2617) FT /gene="AC1" FT CDS complement(1532..2617) FT /codon_start=1 FT /gene="AC1" FT /product="Rep" FT /note="replicase; responsible for viral replication" FT /db_xref="GOA:H9LCQ7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H9LCQ7" FT /protein_id="AEA76762.1" FT /translation="MTRQHQFQVKAKNIFLTYPKCPIPKEQMLEFLKTISCPSDKLFIR FT VSQEKHQDGSLHIHALIQFKGKSQFRNPRHFDVTHPNNATQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGKFQIDGRSARGGQQTANDAAAEALNAGSAEAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPVEVYVSPFCSSSFDQVPQELEEWAAENVVSAAARPLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLEGPL FT YSGSNQSAAQAGEEGDQASSG" FT gene complement(2203..2460) FT /gene="AC4" FT CDS complement(2203..2460) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="involved in symptom expression and suppressor of FT RNAi" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H9LD19" FT /protein_id="AEA76765.1" FT /translation="MGACISMPSSSSKVNPSSETPDISMSLTLITPPNSTQTSRELSPV FT PMSSPTSRRTVITSTGVSFRSMDDLLEEVNRQLMMLQQRP" XX SQ Sequence 2760 BP; 720 A; 573 C; 659 G; 808 T; 0 other; accggatggc cgcgattttt tttcatgtgg gccccacaac acacgtgctg acaatgacat 60 gctgaccaat gaaaaacgtc cctcatagct taattattca tttttcccct atttaaactt 120 ggtccccaag tattgcactc tttccaatgt gggatccatt agtaaacgag tttcccgaaa 180 ccgttcacgg tttcaggtgt atgttagcag ttaaatatct gcagctagta gaaaagacgt 240 attctccaga cactctcggg tacgatttaa tcagggattt gatctcggtt attagggcta 300 gaaattatgt cgaagcgacc agcagatata atcatttcca cgcccgcctc gaaggtacgc 360 cgccgtctca acttcgacag cccatatacc agccgtgctg ctgtccccat tgtccgcgtc 420 accaaagcaa aagcatgggc caacaggccg atgaacagga agcccaggat gtacaggatg 480 tacagaagcc cagatgtgcc tagaggatgt gaaggcccgt gtaaggtcca gtcttttgag 540 tctagacatg atgtccagca cataggtaaa gtcatgtgtg ttagtgatgt tactcgtgga 600 actgggctga cccatcgagt gggtaaaagg ttttgtgtta agtccgtcta tgttctgggc 660 aagatttgga tggatgagaa catcaagact aagaatcaca cgaatagcgt tatgtttttt 720 cttgttagag atcgtaggcc cgtagataag ccccaagact ttggtgaggt atttaacatg 780 tttgataatg agcccagtac ggcgactgtg aagaacgtgc atcgtgacag gtatcaggtg 840 ctgaggaagt ggcatgcaac tgtgactggt ggacaatatg catcgaagga gcaagctctc 900 gtgaagaagt ttattagggt taataattat gttgtgtata accagcaaga ggctggtaaa 960 tatgagaatc atagtgagaa tgcattgatg ttgtatatgg cgtgtaccca tgcctctaac 1020 cctgtgtatg cgacgttgaa gatccgtatc tatttttacg actctgtaac caactgaaat 1080 taataaagat tgaattttat tatatttgaa ctttgtacat gaattgtttg tgctaataca 1140 ttccataata catggtcgac agctctaatg acattgttta tactaattac agcaaaatta 1200 tttaaaaact tcaacacttg ggtcctaaat acccttaaga aatgaccagt ctgaggctgt 1260 aaggtcgtcc agattcggaa ggttagaaaa catttgtgta tccccaacgc ttttctcagg 1320 ttgtgattga accgtacttg gactgttatg atgtcttggt tcctcaggaa tggccggtgg 1380 tggtgctcga ttatcttgaa atacagggga tttgttatct cccagataag cacggaattc 1440 tctgcttgag ctgcagtgat gggttcccct gtgcgtgaat ccatagccgt ggcagcgtaa 1500 tgcgatgaaa tatgaacagc cgcagtctag gtcaacccga cgacgcctgg tccccctctt 1560 cgccagcctg tgctgcactt tgattggaac ctgagtagag tgggccttcg agggtgatga 1620 aggtcgcatt ctttaaagcc caatttttga gtgcggaatt cttctcttca tccaagaact 1680 ctttatagct ggaattgggt cctggattgc agaggaagat agcgggaatt ccacctttaa 1740 tttgaactgg ctttccgtat tttgtatttg attgccagtc cctttgggcc cccatgaatt 1800 ccttaaagtg ctttaggtag tgcgggtcga cgtcatcaat gacgttgtac caggcgtcat 1860 tactgtagac ctttgggcta aggtcgagat gtccacacaa atagttgtgt ggacctagtg 1920 acctggccca cattgtcttg cccgttctac tgtcgccctc tatcactata ctcatgggtc 1980 gtaatggccg cgcagcggca ctgacgacgt tctcggcagc ccactcttca agttcttgtg 2040 gaacttgatc aaaagaagaa gaacaaaaag gagaaacata aacctccaca ggaggtgtaa 2100 aaatcctatc taaattacat tttaaattat gatattggaa aataaaatct ttaggtagtt 2160 tttctctaat tattgctaac gccgcttcag ccgaacctgc attcagggcc tctgctgcag 2220 catcattagc tgtctgttga cctcctctag cagatcgtcc atcgatctga aacttacccc 2280 agtcgatgta atcaccgtcc ttctcgatgt aggacttgac atcggaactg gacttagctc 2340 cctggaagtt tgggtggaat tgggtggcgt tattagggtg agtgacatcg aaatgtctgg 2400 ggtttcggaa ctgggattta cctttgaact ggatgagggc atggatatgc aggctcccat 2460 cttggtgttt ttcctgtgag actctgataa ataatttatc agaaggacaa gaaatggttt 2520 taaggaattc gagcatttgc tctttgggta ttgggcattt gggataagta aggaagatat 2580 ttttggcctt aacttggaat tggtgctgac gtgtcatatt gaattgggtg ctcttcaaaa 2640 ctctacggaa tggggtgctt tgggtgccta tttataccga gctcccaaat ggcatttccg 2700 taatttcggg gaaaattcca aatttttccc gctccaaaaa gcggccatcc gtataatatt 2760 //