ID   HM004548; SV 1; circular; genomic DNA; STD; VRL; 1368 BP.
XX
AC   HM004548;
XX
DT   09-MAY-2010 (Rel. 104, Created)
DT   09-MAY-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Cotton leaf curl Burewala alphasatellite clone Jit 9, complete sequence.
XX
KW   .
XX
OS   Cotton leaf curl Burewala alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1368
RA   Kumar J., Kumar A., Khan J.A.;
RT   ;
RL   Submitted (14-MAR-2010) to the INSDC.
RL   Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL   Marg, Lucknow, Uttar Pradesh 226001, India
XX
DR   MD5; 71ae5bd7f57a6c0934ec0dec853738de.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1368
FT                   /organism="Cotton leaf curl Burewala alphasatellite"
FT                   /host="Abelmoschus esculentus"
FT                   /isolate="Bihar"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="leaf tissue"
FT                   /clone="Jit 9"
FT                   /note="acronym: CLCuBwA"
FT                   /db_xref="taxon:713091"
FT   gene            78..1025
FT                   /gene="alpha rep"
FT   CDS             78..1025
FT                   /codon_start=1
FT                   /gene="alpha rep"
FT                   /product="replication protein"
FT                   /db_xref="GOA:D6Q0T9"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D6Q0T9"
FT                   /protein_id="ADG04779.1"
FT                   /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRSFSQVKALFGDLNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT                   GDYCPAGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSW
FT                   QSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISVDRVHVIPCIPCGVCLKHHVGEIKCEEYLE"
XX
SQ   Sequence 1368 BP; 405 A; 257 C; 320 G; 386 T; 0 other;
     acccagcctc ggttccctct ccttgtgttc cctcgtgctt ttcacgtgct ctctctcttc        60
     tgtgttttta agcgaagatg cctactattc agtcacaatg gtggtgtttt actgtcttct       120
     tcctttctgc gaccgctccc gatctggttc ctctcttcga gaacacccac gttagttacg       180
     cctgctggca ggaagaagag tcgccgacga ctcgacgacg ccacttgcag ggctacctgc       240
     aattgaaggg gaaaagaagc ttttcgcagg ttaaggcact gttcggagac ctgaaccccc       300
     acctggagaa acaacgtgcg cgtaagaccg acgaagctcg ggattactgt atgaaagagg       360
     aaactagggt ttccggtcct tttgaatttg gggattactg tcctgctggt tctcacaaac       420
     gacgacaacg agaatctgta attcgaagtc cggtgagaat ggctgaggag aatccgtccg       480
     tcttccgacg agtcaaggca aagattgctg aggaagaatt ccagaagacc gccaaggaga       540
     ttcaaatttc aaatttgaaa tcttggcaat cgcgcctgaa gacgctcctc gaacgggacc       600
     cagatgaccg cactatcttc tgggtttacg gacctgatgg tggggaagga aaatccacct       660
     ttgccagaga cctgtacaga agtgggtcct ggttctatac acgtggagga tctgcagata       720
     atgtagctta ccagtacata ggatgtttag ggaataatat tgtatttgat attcctcgtg       780
     ataagaagga ttatctacaa tacagtttaa tagagatgtt taaggataga ttaatagtta       840
     gtaataagta tgagcctctg atggctccct taattaattg tatccatgta gttgtgatgt       900
     ctaattttct cccagacttt gagaagatta gcgtagatag agtccatgta atcccatgta       960
     ttccttgtgg tgtttgtctt aagcatcatg ttggtgaaat aaaatgtgag gaatatttgg      1020
     aataatctga gatgtttacc gtataataga ttatattaaa gagagaaggg ccgcgcagcg      1080
     gcaataacat gagtaatttt gcttcttgaa aacgagaagg aatgaaatga aaaaagaaat      1140
     aaaaaaaaat tgtaatataa agatgtggga cccacattta tattgaaata aaaataaata      1200
     taaaaataac taaataaata tcactattca ttttgcggaa ggacataatt gtaaataatg      1260
     aaagttttgg gtaacgcggt gtaattttaa aagactttag ggtgtgcgct tgcaatttgc      1320
     cgggatccta ggatataaat aacacgtcac cgaggctggt gtagtatt                   1368
//