ID HM003778; SV 1; circular; genomic DNA; STD; VRL; 2578 BP. XX AC HM003778; XX DT 16-AUG-2010 (Rel. 105, Created) DT 28-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Sida golden mosaic Florida virus-Malvastrum strain DE Cuba:Havana:Malvastrum:111:2009 segment DNA-B, complete sequence. XX KW . XX OS Sida golden mosaic Florida virus-Malvastrum OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2578 RX DOI; 10.1007/s00705-010-0761-6. RX PUBMED; 20677027. RA Fiallo-Olive E., Martinez-Zubiaur Y., Moriones E., Navas-Castillo J.; RT "Complete nucleotide sequence of Sida golden mosaic Florida virus and RT phylogenetic relationships with other begomoviruses infecting malvaceous RT weeds in the Caribbean"; RL Arch. Virol. 155(9):1535-1537(2010). XX RN [2] RP 1-2578 RA Fiallo-Olive E., Martinez-Zubiaur Y., Moriones E., Navas-Castillo J.; RT ; RL Submitted (15-MAR-2010) to the INSDC. RL Departamento de Fruticultura Subtropical y Fitopatologia, Consejo Superior RL de Investigaciones Cientificas, Estacion Experimental La Mayora, RL Algarrobo-Costa, Malaga 29760, Espana XX DR MD5; fb764e821e3ed5f5b744f7678d769803. XX CC GenBank Accession Numbers HM003778-HM003779 represent the complete CC genome of Sida golden mosaic Florida virus-Malvastrum strain CC Cuba:Havana:Malvastrum:111:2009. XX FH Key Location/Qualifiers FH FT source 1..2578 FT /organism="Sida golden mosaic Florida virus-Malvastrum" FT /segment="DNA-B" FT /host="Malvastrum coromandelianum" FT /strain="Cuba:Havana:Malvastrum:111:2009" FT /isolate="111" FT /mol_type="genomic DNA" FT /country="Cuba:Havana" FT /collected_by="E. Fiallo-Olive" FT /collection_date="Sep-2009" FT /clone="111H10" FT /db_xref="taxon:871521" FT gene 385..1155 FT /gene="BV1" FT CDS 385..1155 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shutting protein" FT /db_xref="GOA:D9ZFY0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D9ZFY0" FT /protein_id="ADL32227.1" FT /translation="MYPFRSKRGYCFSHRRSTTRNFLFNRSTSIKRHDGKRRGGRFVKP FT IDEPKMSAQSIHENQYGPDFVMAQNSAISTFISYPDMGKVEPSRSRSYIKLKRLRFKGT FT VNIKRVQSDVNMDGSISKVEGVFSLIIVVDRKPHLGPSGCLHTFDELFGAMIHSHGNLS FT IVPSLKDRYYIRHVFKRVLSVDNETLIVDVEGSTTLSNRRFNIWSSFKDVDRDSCKGVY FT DNISKNALLIYYCWMSDMPSKASTYVSFDLDYVG" FT gene complement(1217..2098) FT /gene="BC1" FT CDS complement(1217..2098) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:D9ZFY1" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D9ZFY1" FT /protein_id="ADL32228.1" FT /translation="MNSQLAYPPSAFNYIESHRDEYQLCHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGKWERKPIRCASMSRIGSKCPIELGPGESWASRSTIGTAQSDVD FT SEIENGLHPYRHLSRLGTSVLDPGESASIVGAQRAESNITMSLGQLNELVRTTVQECIN FT NNCQASQAKSLK" XX SQ Sequence 2578 BP; 680 A; 517 C; 551 G; 830 T; 0 other; accggatggc cgcgctttgg tgcccgctcc ctctcacgcg cgctcccctg gtgtggtgct 60 gccactcgcc ctcttattgg tggttgtcct tcacgccccg tctttttgac tggcctttaa 120 ttcaaattaa aggataatgc tttctcgcgc gatttgcttt tattttttga attattgtcg 180 cgcgacgact gagtatggcc cattgtgtca ggtgaaggac gtggctaaat tttgaccatg 240 ctgctgggtc tatttgcgtc taaatgtaaa cgaattattt atataaataa tttttcaagt 300 atgtcatgtt tagcctactc agattctaac cacgtttata ttgttggctg taattgtgtt 360 taatctgcct tttatcattt gataatgtat ccttttagaa gtaaacgtgg ttattgcttt 420 agtcatcgac gatctaccac acgtaacttt ttgtttaacc gttcaacctc aattaagaga 480 catgatggga aacgtcgagg aggtcgattt gtaaagccca ttgatgaacc caaaatgtca 540 gcccaatcca tacatgaaaa tcagtatggg cctgattttg ttatggccca aaattcggct 600 atatctacgt ttatcagtta cccagacatg ggcaaggtag aacctagtcg aagcagatcc 660 tatatcaagt tgaaacgact ccgtttcaaa gggactgtga atatcaaacg tgttcaatcg 720 gatgtgaaca tggatgggtc tatctccaaa gtggaaggag tgttctctct tattattgtt 780 gtagatcgga aacctcactt gggtcctagt ggttgtctgc atacattcga cgagctgttc 840 ggagcaatga ttcacagtca tggcaatctc agcattgtcc cttctctgaa agaccgttat 900 tatattcgcc atgtgttcaa acgtgtactg tccgttgata acgagacgct gatagtagac 960 gtggaaggat ccactaccct atctaatagg cgttttaata tttggtccag tttcaaggac 1020 gttgatcgtg attcatgcaa gggtgtttat gataacataa gcaagaacgc ccttttaatt 1080 tattattgct ggatgtcaga tatgccttca aaggcctcca cttatgtatc ttttgatctt 1140 gactatgttg gttaaatcaa taaaatttgt ttatccaaat ttgtttagct gtttatgata 1200 tagcaaaaga taacatttat ttcaacgact tggcctgaga agcctgacaa ttattattaa 1260 tacattcttg gactgttgtc ctaactaact cgttcaactg gcccaaagac attgtaatgt 1320 tggattccgc tctctgggct cccactattg aagcagactc tcctgggtcc agaacgctgg 1380 ttccaagcct gctcagatgt ctgtatgggt ggagtccgtt ttctatttcc gagtccacat 1440 ctgattgggc cgttcctatc gtacttctgg aagcccatga ttctccaggc ccaagctcaa 1500 ttggacattt agacccaatt ctagacatcg atgcacatct tatgggcttc ctctcccatt 1560 tcccatagtc cacatgcgaa aagtctacat ctttgtctgt gaactgtttt gacagtattt 1620 tgaccgtcgg tgcccggaag gggatatcta ctgagtgttt cgctgtggac aatttcagct 1680 tccctttaaa cttggcgaag tgggttcgct ggtgaacatt ggtatctgaa actctgtaat 1740 agagtttcca tggaatcggg tctttgagag agaagaatga agctgaaaaa tagtggagat 1800 ctatgttgca tctgatcgga aaagtccacg acgcctgcaa agactcattg tctgtcatcc 1860 tcttgtcatg gatctccaca attaccgtcc cagttgcgtt aattggaacc tgttgcctgt 1920 actctatgac acaatgatct atcttcatgc agctacggct gagtcttgcc gtcaactggg 1980 acgccgtcga tggaaattgc aagattatct cagttaggtc atggcagagc tgatattcgt 2040 ctctgtgaga ctctatgtaa ttgaaggcgc ttggaggata tgctaactga gaattcatct 2100 gaaaaataaa ggccgcgcag cggctttgca ggttgaatat gaaatgagta ctaaaaacct 2160 agggtttttg aatatgaaca acttatgaac tccgcgtgta cttgtatgaa ttttctgtga 2220 aacctagtga tataaatgag gaattggagg ataatcgctt aagttttcca gaaaattaag 2280 aacagtcgtt atacctttcc agaaattgaa agctttttga aaaatgggag aaatatgaag 2340 tgtaaataat tatgggaaat atgttagatg tgaaagagtt tatatagaca ttctcttttt 2400 tgttgattta tttgcagtct ttctatcaat ggcatttttg taataatgag agtgttcccc 2460 aattgagact ctctcaaact ttctcataca attggggaat ggggaacaat atatactaga 2520 accctcaata gaactttgga tctcgttcac acacgtggcg gccatccgct ataatatt 2578 //