Dbfetch

Dbfetch

ID   HF674938; SV 1; linear; genomic DNA; STD; VRL; 521 BP.
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AC   HF674938;
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DT   05-FEB-2013 (Rel. 115, Created)
DT   05-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Papaya leaf curl China virus AV2 gene and partial AV1 gene, isolate
DE   GX1116-2
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KW   .
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OS   Papaya leaf curl China virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-521
RA   Zhou X.;
RT   ;
RL   Submitted (30-JAN-2013) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, No.268 Kuaixuan
RL   Road, Hangzhou, Zhejiang 310029, CHINA.
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RN   [2]
RA   Jiao X., Xie Y., Zhou X.;
RT   "Pathogen analysis of Tomato yellow leaf curl disease in China";
RL   Unpublished.
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DR   MD5; 612cf2e06de1eeda6ff1686753484330.
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FH   Key             Location/Qualifiers
FH
FT   source          1..521
FT                   /organism="Papaya leaf curl China virus"
FT                   /isolate="GX1116-2"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Guangxi"
FT                   /collection_date="2012"
FT                   /db_xref="taxon:229634"
FT   CDS             135..485
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /db_xref="GOA:L8E9V6"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:L8E9V6"
FT                   /protein_id="CCQ77517.1"
FT                   /translation="MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGHDLIRDL
FT                   ILVIRARDYVEATRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV
FT                   PKAKDVSDVQRP"
FT   CDS             295..>521
FT                   /gene="AV1"
FT                   /product="AV1 protein"
FT                   /function="coat protein"
FT                   /db_xref="GOA:L8EB41"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:L8EB41"
FT                   /protein_id="CCQ77518.1"
FT                   /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSW
FT                   VNRPMYRKPRMYRMYKGPDVPRGCEGPCKV"
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SQ   Sequence 521 BP; 133 A; 130 C; 113 G; 145 T; 0 other;
     taatattacc ggatgaccgc gatttttttt aaagtggtcc ccgcatgcgc tcctgtccaa        60
     tcctatccgc tcctcaaagc ttaattatta agtagtcctc tatataactt ggtccccaag       120
     tagtcacgtc aaacatgtgg gatcctttac taaacgagtt tcccgatacc gtacatggtt       180
     tcaggtgtat gctagcaatt aagtatttgc aactggtaga aaatacgtac tctccagata       240
     cattagggca cgatttaatt cgcgatttaa ttttagttat tcgtgctaga gattatgtcg       300
     aagcgacccg ccgatatagt catttccact cccgcatcca aggtgcgtcg ccggctgaat       360
     ttcgacagcc cgtatgtcag ccgtgctgct gcccccactg tcctcgtcac aaacaaaagg       420
     aggtcatggg tgaatcggcc catgtaccga aagccaagga tgtatcggat gtacaaaggc       480
     cctgatgttc ctcgtggttg tgaaggacca tgcaaagtcc a                           521
//