ID HF674921; SV 1; circular; genomic DNA; STD; VRL; 2749 BP. XX AC HF674921; XX DT 30-MAY-2013 (Rel. 116, Created) DT 29-JUL-2013 (Rel. 117, Last updated, Version 2) XX DE Tomato leaf curl Yunnan virus complete genome, isolate T5 XX KW complete genome. XX OS Tomato leaf curl Yunnan virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2749 RA Zhou X.; RT ; RL Submitted (30-JAN-2013) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, No.268 Kuaixuan RL Road, Hangzhou, Zhejiang 310029, CHINA. XX RN [2] RX DOI; 10.1099/vir.0.053181-0. RX PUBMED; 23720217. RA Xie Y., Zhao L., Jiao X., Jiang T., Gong H., Wang B., Briddon R.W., RA Zhou X.; RT "A recombinant begomovirus resulting from exchange of the C4 gene"; RL J. Gen. Virol. 94(Pt 8):1896-1907(2013). XX DR MD5; 5d1a8110ea853a532aed7e6f76fbc085. XX FH Key Location/Qualifiers FH FT source 1..2749 FT /organism="Tomato leaf curl Yunnan virus" FT /isolate="T5" FT /mol_type="genomic DNA" FT /country="China:Yunnan" FT /collection_date="2011" FT /db_xref="taxon:1290341" FT CDS 130..477 FT /transl_table=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:R4ZD72" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:R4ZD72" FT /protein_id="CCQ77479.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVILVRDYVEASRRYSHFHSRLQGASPSELRQPLHTSCCCPHCPRHQKTNMEQQAHVS FT KAHDVPDVQKP" FT CDS 290..1060 FT /transl_table=1 FT /gene="AV1" FT /product="AV1 protein" FT /function="coat protein" FT /db_xref="GOA:R4ZD75" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:R4ZD75" FT /protein_id="CCQ77480.1" FT /translation="MSKRPADIVISTPASKARRRLNFDSPYTRRAAVPTVRVTRRQIWN FT NRPMYRKPMMYRMYRSPDVPKGCEGPCKVQSYEARHDVSHTGKVICVTDVTRGNGITHR FT VGKRFCVKSIYVIGKIWMDENIKLKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP FT STGTVKNDLRDRFQVIRKFNYMVTGGQYASKEQAVVKKFMRVNTHVVYNHQEQAKYENH FT TENALLLYMVCTHASNPVYATLKVRIYFYDSQMN" FT CDS complement(1057..1461) FT /transl_table=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:R4ZD48" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:R4ZD48" FT /protein_id="CCQ77481.1" FT /translation="MDSRTGELLTAAQAENGVYIWTVKNPLYFKITKHLERPFLRNHDI FT ITLQVQFNYNLRKALGIHKCFLTCKIWTRLHPQTLRFLRVFKYQCIKYLDRLGVISINN FT VIRAISHVLYNVLEGTIDVIEDHDIKLNIY" FT CDS complement(1202..1606) FT /transl_table=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:R4ZD70" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:R4ZD70" FT /protein_id="CCQ77482.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKKTTRRRRVDLPCGCSYFLAIG FT CHDNGFTHRGTTHCSSSREWRLYLDGQKSPLFQDNQTPRATISEEPRHNHITSPIQLQP FT EESVGDTQMFSNLQNLDSFTSSDIAFLKSI" FT CDS complement(1509..2594) FT /transl_table=1 FT /gene="AC1" FT /product="AC1 protein" FT /function="Rep" FT /db_xref="GOA:R4ZD69" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:R4ZD69" FT /protein_id="CCQ77483.1" FT /translation="MPRLNSFQVKAKNIFLTYPKCPIPKEQALEIIQQIPCPSDKLFIR FT VAQEKHRNGSLHLHVLIQFKGKAQFRNPRHFDITHPNTSTQYHPNFQGAKSSSDVKSYI FT KKDGDYIDWGSFQIDGRSARGGQQTANDAAAEALNTGSAEAAMAVIREKLPKDYIFQYH FT NLKSNLDRIFAPPLEVYISPFASSSFDQVPEELEDWAVDNVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNTALRNWALKNAIFVTLQGPL FT YSGSYQGATPNRQEDNQTTES" FT CDS complement(2180..2437) FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:R4ZD67" FT /protein_id="CCQ77484.1" FT /translation="MGHCISMCSSNSKVKPSSVIPDISTSHTLIPPPNTTQTSRELSPA FT RTSSPTSRRTVITSTGVVFRSMEDLHEEVNRQLMMLLQRP" XX SQ Sequence 2749 BP; 730 A; 547 C; 624 G; 848 T; 0 other; accggatggc cgcgcgattt tttttaaagt ggttcccgca ttcgcgtatg tccaatcatg 60 gccgctcctc aaagcttaat tattaaatgg tcccctatat aacttaggcc ccaagtattt 120 acgttaaaca tgtgggatcc tttactcaac gagttcccgg ataccgtaca tgggttcagg 180 tgtatgcttg caataaaata cctgcagctt gtagaaaata cgtattctcc cgatacgttg 240 ggatacgatc taatacgcga tctcatactt gttatactgg tgagggatta tgtcgaagcg 300 tcccgccgat atagtcattt ccactcccgc ctccaaggcg cgtcgccgtc tgaacttcga 360 cagcccttac acacgtcgtg ctgctgtccc cactgtccgc gtcaccagaa gacaaatatg 420 gaacaacagg cccatgtatc gaaagcccat gatgtaccgg atgtacagaa gccctgatgt 480 tccgaagggt tgtgaaggcc catgtaaggt gcagtcatat gaggcccgtc atgatgtatc 540 tcatactggt aaggtgatat gtgtcacgga tgttacacgt ggtaatggta ttacgcatcg 600 agttggtaag aggttttgtg tgaaatctat ttacgtcatt gggaagatat ggatggatga 660 aaatattaaa ttgaagaatc acaccaatac agttatgttt ttccttgtta gagatcggcg 720 tccgagtggt actccgatgg attttcaaca ggtgtttaat tgttatgaca atgagccaag 780 caccggtact gtgaagaatg atcttagaga taggtttcaa gtgattcgca agttcaatta 840 tatggttact ggtgggcaat atgcgtccaa agaacaagca gtggtgaaga agttcatgcg 900 ggttaatacc catgttgtgt ataatcatca agaacaagcg aagtatgaaa atcatactga 960 gaatgcgttg ttgttgtata tggtgtgtac tcatgctagt aatcctgtat atgcgacttt 1020 gaaagtccgt atctattttt atgattctca aatgaattaa taaatattta gttttatatc 1080 atgatcttca attacatcaa tcgtgccttc taggacattg tataatacat gagatattgc 1140 tctaattaca ttgttgatgc taatcactcc caatctatct aaatatttaa tacattgata 1200 cttaaatact cttaagaaac gcaatgtctg aggatgtaaa cgagtccaga ttttgcaggt 1260 tagaaaacat ttgtgtatcc ccaacgcttt cctcaggttg tagttgaatt ggacttgtaa 1320 tgtgattatg tcgtggttcc tcagaaatgg tcgctctagg tgtttggtta tcttgaaata 1380 aaggggattt ttgaccgtcc aaatataaac gccattctct gcttgagctg cagtgagtag 1440 ttcccctgtg cgtgaatcca ttatcgtgac agccaatggc gagaaagtat gaacagccac 1500 agggtagatc aactctccgt cgtctggttg tcttcttggc gattcggtgt tgcaccttga 1560 taggaacctg agtagagtgg gccttggagg gtgacgaaga tcgcattttt tagcgcccaa 1620 tttcgaagtg cggtgttctt ttcctcttcc agatactctt tatagctgga attgggtcct 1680 ggattgcaga ggaagatagt gggtattccg cctttaattt gaactggttt cccgtatttg 1740 gtgttgcttt gccagtccct ttgggctccc atgaattcct taaagtgctt taggtagtgc 1800 ggatctacgt catcaatgac gttgaaccaa gcatcattat tgtacacctt tggactcaga 1860 tccaaatgac cacacaaata attatgtggt cctaatgacc tggcccacat cgtcttcccc 1920 gttctactat caccctctat gactatactt atcggtctta aaggccgcgc agcggcactg 1980 acaacattat ccaccgccca atcttcaagt tcttctggaa cttgatcaaa agaagaagaa 2040 gcaaatggag aaatatatac ctccaacgga ggtgcaaaaa tcctatctaa attagatttt 2100 aaattatgat attgaaaaat ataatctttc ggcagtttct cccgaataac agccatagcg 2160 gcttcagcgg aacctgtgtt tagggcctct gcagcagcat cattagctgt ctgttgacct 2220 cctcgtgcag atcttccatc gatctgaaaa ctaccccagt cgatgtaatc accgtccttc 2280 ttgatgtagg acttgacgtc cgagctggac ttagctccct ggaagtttgg gtggtattgg 2340 gtggaggtat tagggtgtgt gatgtcgaaa tgtctgggat tacggaactg ggctttacct 2400 ttgaattgga tgagcacatg gagatgcagt gacccatttc gatgtttttc ttgtgctact 2460 cgtatgaata atttatcgga tgggcatggt atttgttgaa tgatttctag ggcttgttct 2520 tttggaatgg ggcatttggg ataagtgaga aatatgtttt tggctttcac ttggaatgaa 2580 ttaagacgag gcattttgac ttagtcaatt gggtgctctc taaagtctta tggaatgggg 2640 ggctttgggt gcccatttat accgagcacc caaatggcaa tatcgtaatt ccccaaataa 2700 ggtcaaaatt caaaaatcga tattcaaaag cggccatccg tataatatt 2749 //