ID   HF565179; SV 1; linear; genomic DNA; STD; VRL; 1722 BP.
XX
AC   HF565179;
XX
DT   25-FEB-2013 (Rel. 115, Created)
DT   25-FEB-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Catharanthus yellow mosaic virus Rep gene for replication initiator
DE   protein, clone M8
XX
KW   .
XX
OS   Catharanthus yellow mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1722
RA   Afzal Z.;
RT   ;
RL   Submitted (07-DEC-2012) to the INSDC.
RL   Afzal Z., NIBGE, Agricultural biotechnology division, NIBGE Jhang road,
RL   Faisalabad, PO Box 577, 38000, PAKISTAN.
XX
RN   [2]
RA   Afzal Z., Tahir N., Amin I., Mansoor S.;
RT   "Association of multiple begomoviruses and Cotton leaf curl Multan
RT   betasatellite with leaf curl disease of mint in Pakistan";
RL   Unpublished.
XX
DR   MD5; 7abc18ab1a3064165fb38557c3178cc0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1722
FT                   /organism="Catharanthus yellow mosaic virus"
FT                   /host="Mentha spicata"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Faisalabad"
FT                   /collected_by="Zunaira Afzal"
FT                   /collection_date="23-Dec-2010"
FT                   /clone="M8"
FT                   /db_xref="taxon:1076345"
FT   CDS             complement(188..1156)
FT                   /codon_start=1
FT                   /gene="Rep"
FT                   /product="replication initiator protein"
FT                   /db_xref="GOA:M1XFC4"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:M1XFC4"
FT                   /protein_id="CCP37716.1"
FT                   /translation="MPRINSFCVNAKNIFLTYPKCSIPKEQMLDILQSINCPSDKLFIR
FT                   VAQEKHQDGSLHIHALIQFKGKAKFRNPRHFDVTHPNTSTQFHPNLQGAKSSSDVKSYI
FT                   EKDGDYIDWGQFQIHGRSARGGQQTANDAAAEARNAGSAEAALAIIREKLPKDFIFQYH
FT                   NLKCNLDRIFRPPVEVYVSPFSSSSFDQVPEELEEWASENVMGPAARPFRPISIVIEGD
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKIYKNEAWYNIIDDVDPHYLKHFKEFMGAQRDW
FT                   QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKNFWTRIRIAH"
XX
SQ   Sequence 1722 BP; 431 A; 380 C; 399 G; 512 T; 0 other;
     ttcccctgtg cgtgaatcca tggttgtggc agttgatgtg tacgtagtat gagcacccac        60
     agtttagatc aaccctctta cgccggatgg ctctacgctt agcagctctg tgttggacct       120
     tgattggtac ctgagtatag tggctcttcg agggagatga atgtcgcatt ttttagtgcc       180
     caggctttca atgcgctatt cttatcctcg tccaaaaatt cttataactt gagttgggac       240
     ctggattgca gaggaagata gtgggaattc cccctttaat ttgaactggc tttccgtact       300
     tggtgttgct ttgccagtcc ctttgggccc ccatgaattc tttaaagtgt tttagatagt       360
     ggggatcgac gtcatcaatg atgttgtacc aggcctcgtt cttgtagatc ttagggctca       420
     gatctaaatg gccacacaga taattgtgtg gtcccaaaga cctggcccac attgtcttgc       480
     ccgtacgact atcaccctct atgacaatac ttatgggtct aaatggccgc gcagcgggac       540
     ccatcacatt ttcagaggcc cactcctcaa gttcttccgg aacttgatca aacgaagacg       600
     aagaaaaagg agaaacataa acctccactg gaggtctaaa aatcctatct agattacatt       660
     tcaaattatg atattgaaaa ataaaatctt tagggagttt ttcccttatt attgctaagg       720
     cagcttcagc cgaacctgca tttcgggcct ctgctgcagc atcattagct gtctgttgac       780
     cccctcgagc agatcttcca tggatctgaa actgacccca gtcgatgtaa tcgccgtcct       840
     tctcgatgta ggacttgaca tctgagctgg actttgctcc ctggaggttt gggtggaatt       900
     gggttgaggt attagggtga gtgacatcga aatgcctggg gtttctgaac ttggctttac       960
     ctttgaactg gatgagggca tggatatgca gagacccatc ttggtgtttt tcttgtgcca      1020
     ctcggataaa taatttatca gatgggcaat ttattgactg aagaatgtcg agcatttgct      1080
     ctttgggtat tgagcatttt ggataagtga gaaagatatt tttggcatta acacagaaag      1140
     agttaatacg aggcatattg aattggggac actcaaaact ctgaggaatg ggggactcgg      1200
     gggacgcatt tatatggtgt ccccaaatgg catttctgta atttgggaaa ataattcgaa      1260
     atcctcacgc tccaaaaagc ggccatccgt ataatattac cggatggccg cgattttttt      1320
     tttgggcccc acatggcact aactgccatt tacacgtgga ccaataagaa tcgttccaca      1380
     tcgtctaatt gttttgtggt ccccccctat ataattactt gctgagtaag attgttgtaa      1440
     acatgtggga cccactagtt aacgagtttc cagaaactgt tcatgggttt aggtgcatgt      1500
     tggcagtgaa atatctccaa ctagttgcag atacgtattc tccagatacg gtgggctacg      1560
     atttaatacg tgatttaatt tgtattctac gttccaggaa ttatgtcgaa acgaccagca      1620
     gatataatca tttccacgcc cgcctcgaag gtacgccgcc gtctcaactt cgacagccca      1680
     tatgcgagcc gtgctgctgc ccccattgtc cgcgtcacaa aa                         1722
//