ID   HF565177; SV 1; linear; genomic DNA; STD; VRL; 1080 BP.
XX
AC   HF565177;
XX
DT   25-FEB-2013 (Rel. 115, Created)
DT   25-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Tomato leaf curl Pakistan virus CP and REn genes, clone M6
XX
KW   .
XX
OS   Tomato leaf curl Pakistan virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1080
RA   Afzal Z.;
RT   ;
RL   Submitted (07-DEC-2012) to the INSDC.
RL   Afzal Z., NIBGE, Agricultural biotechnology division, NIBGE Jhang road,
RL   Faisalabad, PO Box 577, 38000, PAKISTAN.
XX
RN   [2]
RA   Afzal Z., Tahir N., Amin I., Mansoor S.;
RT   "Association of multiple begomoviruses and Cotton leaf curl Multan
RT   betasatellite with leaf curl disease of mint in Pakistan";
RL   Unpublished.
XX
DR   MD5; e27a3fac0125613800ea0a3b7606bbe9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1080
FT                   /organism="Tomato leaf curl Pakistan virus"
FT                   /host="Mentha spicata"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Faisalabad"
FT                   /collected_by="Zunaira Afzal"
FT                   /collection_date="23-Dec-2010"
FT                   /clone="M6"
FT                   /db_xref="taxon:341711"
FT   CDS             50..676
FT                   /gene="CP"
FT                   /product="Coat Protein"
FT                   /db_xref="GOA:M1XES6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:M1XES6"
FT                   /protein_id="CCP37713.1"
FT                   /translation="MNRKPRFYRMYRSSDVPRGCEGPCKVQSFESRHDVSHIGKVMCIS
FT                   DVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPHDF
FT                   GEVFDMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVY
FT                   NQQEAGMYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   CDS             complement(673..1077)
FT                   /gene="REn"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:M1XEB7"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:M1XEB7"
FT                   /protein_id="CCP37714.1"
FT                   /translation="MDSRTGGSITAAQAENGVYIWEIQTPLYFKITEHHNRPLNMNHDI
FT                   ITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLNNLGIVSINN
FT                   VVRAVDHVLWNVLEHIVYVDQSSSIKFNIY"
XX
SQ   Sequence 1080 BP; 296 A; 201 C; 269 G; 314 T; 0 other;
     gattcccatt gtccgcgtca cggaggcaag ggcatgggcg aacaggccca tgaaccggaa        60
     accaagattt taccggatgt atcgaagctc tgacgtgccc aggggctgtg aaggcccatg       120
     taaggtgcaa tcttttgaat ccaggcacga tgtctcccat attggtaagg tcatgtgtat       180
     tagtgatgta actaggggta ccggtttaac tcatagggtt ggcaagaggt tctgtgtgaa       240
     gtccgtctac gtgctgggca agatctggat ggacgagaat attaagacga agaaccacac       300
     aaatagtgtt atgttttttc ttgttaggga tcgaaggccc gttgacaagc ctcacgattt       360
     tggagaggtt tttgacatgt ttgataatga gcccagcacg gcgactgtga agaatgttca       420
     tcgtgatagg taccaggttc tgaggaagtg gcatgcgaca gttactggtg gacaatacgc       480
     ttcaaaggaa caagctctcg tgaagaagtt tattagagtt aataattatg ttgtttataa       540
     ccagcaagaa gctggcatgt atgagaatca tagtgagaat gcgttaatgt tgtatatggc       600
     gtgtactcat gcctctaatc cagtgtatgc tactttgaag atacggatct acttctatga       660
     ttccgtgaca aattaataaa tattgaattt tattgaagat gattggtcta catatacaat       720
     atgctctaat acattccata atacatgatc aactgcccta actacattat taatactgac       780
     aatccctaag ttatttaaat acttaagcac ttgggtctta aagaccctta agaaacgacc       840
     agtcggaggc tgtgaggtca tccagattcg gaaggctagg aaacatttgt gtatccccaa       900
     cgctttccgc aggttgtgat tgaactgtat ctggacagtg atgatgtcgt ggttcatgtt       960
     gagtggcctg ttgtggtgct ctgttatctt gaaatatagg ggagtttgaa tctcccagat      1020
     atacacgcca ttctctgctt gagctgcagt gatggatccc cctgtgcgtg aatccatgga      1080
//