ID HF549182; SV 1; circular; genomic DNA; STD; VRL; 2751 BP. XX AC HF549182; XX DT 15-NOV-2012 (Rel. 114, Created) DT 08-NOV-2014 (Rel. 122, Last updated, Version 2) XX DE Cotton leaf curl Burewala virus complete genome, isolate C-49 XX KW complete genome. XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2751 RA Tahir M.; RT ; RL Submitted (05-NOV-2012) to the INSDC. RL Tahir M., ASAB, National University of Sciences & Technology, ASAB, RL National University of Sciences & Technology, Islamabad 44000, PAKISTAN. XX RN [2] RX DOI; 10.1007/s00705-014-2097-0. RX PUBMED; 24838851. RA Shuja M.N., Briddon R.W., Tahir M.; RT "Identification of a distinct strain of cotton leaf curl Burewala virus"; RL Arch. Virol. 159(10):2787-2790(2014). XX DR MD5; f68784a3209a8f2036a1104cb9725f19. DR EuropePMC; PMC6451280; 30954067. XX FH Key Location/Qualifiers FH FT source 1..2751 FT /organism="Cotton leaf curl Burewala virus" FT /host="Gossypium hirsutum" FT /isolate="C-49" FT /mol_type="genomic DNA" FT /country="Pakistan:Layyah" FT /isolation_source="host leaves" FT /collected_by="M Tahir" FT /collection_date="18-Oct-2011" FT /identified_by="M. Tahir" FT /clone="GMT-15" FT /db_xref="taxon:620894" FT CDS 118..474 FT /gene="V2" FT /product="V2 protein" FT /function="movement" FT /db_xref="GOA:D3HIQ8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3HIQ8" FT /protein_id="CCO61992.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS 278..1048 FT /gene="CP" FT /product="coat protein" FT /function="encapsidation" FT /db_xref="GOA:K8ESZ7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:K8ESZ7" FT /protein_id="CCO61993.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1051..1455) FT /gene="REn" FT /product="replication enhancer protein" FT /function="replication enhancer" FT /db_xref="GOA:K8F8A6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K8F8A6" FT /protein_id="CCO61994.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPPYFKIISHVNRPFTTNMDI FT LTIKIQFNYNTRKALGLHKCFLTFRIWTTLQPQTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSEIKFKLY" FT CDS complement(1497..2588) FT /gene="Rep" FT /product="replication associated protein" FT /function="replication" FT /db_xref="GOA:K8ESU1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K8ESU1" FT /protein_id="CCO61995.1" FT /translation="MAAPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGVKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGTKSEALRVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWVIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFIDEEKNTALKNWAVKNAIFITLDRPL FT YSGTNQSTAQGSEEAQQEEESRS" FT CDS complement(1643..1807) FT /gene="TrAP" FT /product="transcription activator protein" FT /function="transactivator" FT /db_xref="UniProtKB/TrEMBL:K8ES95" FT /protein_id="CCO61996.1" FT /translation="MTSTRISSNTLKSSWGPKGTGNPTQSTGSQFKLKAGYQQSSSAIL FT VQTAVIKNS" FT CDS complement(2129..2674) FT /gene="C4" FT /product="C4 protein" FT /function="symptoms determinant" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K8FE59" FT /protein_id="CCO61997.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSARITDS FT STWYPQPDQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLT FT PQHLTQALSQRLLESLRN" XX SQ Sequence 2751 BP; 707 A; 538 C; 662 G; 844 T; 0 other; accggatggc cgcgcgattt tttatgtggg cccccgattt atgagattgc tccctcaaag 60 cttaaataat tctcccgcct attataagta cttcgttgct aagtatgcgt ttgaaaaatg 120 tgggatccac tgttaaatga gttccccgac accgttcacg gttttaggtg tatgttagca 180 gttaaatatt tgcagttagt agagaaaact tactctcctg atacattggg ttacgatttg 240 ataagggatt taattcttgt aataagggct aggaattatg tcgaagcgac cagcagatat 300 aatcatttcc acgcccgctt cgaaggtacg ccgccgtctc aacttcgaca gcccatatgt 360 gagccgtgct gctgccccca ttgtccgcgt caccaaagca aaagcatggg cgaacaggcc 420 catgaacaga aagcccagga tgtacaggat gtacagaagt ccagatgttc ctagaggatg 480 tgaaggccca tgtaaggttc agtcctttga gtccagacat gatattcagc atataggtaa 540 agtcatgtgt gtcagtgatg ttactcgtgg aactgggctg acccatagag tgggtaagag 600 attttgtgtc aagtctgtgt atgtgttggg taagatctgg atggatgaga acattaagac 660 caagaatcac acgaatagtg tgatgttttt tttagttaga gaccgtagac cagttgataa 720 acctcaggat tttggagagg tgtttaatat gtttgataat gagcccagta cggcgactgt 780 gaagaatgtt catcgtgata ggtatcaggt tctgcgcaaa tggtatgcaa ctgtcaccgg 840 tggacaatac gcttcaaagg aacaagcgct tgtgaagaag tttattaggg ttaataatta 900 tgttgtttac aatcaacagg aagcaggaaa atacgagaat catacggaaa atgcgttaat 960 gctttatatg gcttgtaccc acgctagcaa ccctgtttat gctacgttga agattaggat 1020 atatttttat gactctgtaa cgaattgata ttaataaagt ttgaatttta tttctgaata 1080 ttgatctaca tacatagttt gttggattac attgtacaat acatgttcta cagctttaat 1140 aactaaatta attgaaatta caccgagatt gttcagatat ttgaggactt gggttttgaa 1200 tacccttaag aaaagaccag tctgaggctg taaggtcgtc cagattcgga aggttagaaa 1260 acacttgtgc agtcccagag ctttccgagt gttgtagttg aactggatct tgatcgtgag 1320 tatgtccata ttcgtcgtga atggacggtt gacgtggctg atgatcttga aataaggggg 1380 atttggaacc tcccagatat atgcgccatt ccctgcttga gctgcagtga tgggttcccc 1440 tgtgcgtgaa tccatggttg tggcagttga ttgacagata ctaagaacac ccgcattcaa 1500 gatctactct cctcctcctg ttgcgcctct tcgcttccct gtgctgtact ttgattggta 1560 cctgagtaca ggggcctatc aagtgtgatg aagatcgcat tctttactgc ccagttcttt 1620 agtgcggtgt tcttttcctc gtctatgaat tctttataac tgctgtttgg accaggattg 1680 cagaggaaga ttgttggtat cccgccttta atttgaactg gcttcccgta ctttgtgttg 1740 gattgccagt ccctttgggc ccccatgaac tctttaaagt gtttgaggaa atgcgggtcg 1800 acgtcatcaa tgacgttgta ccaggcgtcg ttactgtata ctttgggact gaggtccaga 1860 tgtccgcaca aatagttatg tggtcccaat gatctagccc acatcgtctt ccccgttcga 1920 ctatctccct caattactat actccgaggt ctaaggggcc gcgcagcggc atcgacaacg 1980 ttatcgatga cccaaacttc aagttcttct ggaacttgat cgaaagaaga aggtgaaaaa 2040 ggagaaatat agggagccgg tggctcctga aagattctgt ctagatttgc atttaaatta 2100 tgaaattgta gtacaaaatc tttaggagct agttccttaa tgactctaag agcctctgac 2160 ttagtgcctg cgttaagtgc tgcggcgtaa gcgtcgttgg ctgtctgctg tcctcctctt 2220 gctgatcttc catcgatctg aaactctccc cactcgagag tgtccccgtc cttgtcgatg 2280 taggccttga catctgagct tgatttaact ccctgaatgt tcggatggaa atgtgctgat 2340 ctggttgggg ataccaggtc gaagaatctg ttattcgtgc agacgaattt gccctcgaac 2400 tggatgagca catggagatg agggctccca tcttcgtgta actctctgca gagtttgatg 2460 tattttttat tcgagggtgt gttgatggct tgaatttggg aaagtgcttc ctctttagtg 2520 agtgagcact gtggataagt gatgaaataa tttttggctt gtactttaaa acgtttgggg 2580 gcagccattg actttggtca attagagaca actggtgggc ttttactctg ggaattggag 2640 actggataca atttatagtg tctccaaatg gcatattctg taaataacta gaagttcgtt 2700 tgaaattcaa attccccttt gggctccaaa agcggccatc cgtataatat t 2751 //