ID HF549180; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC HF549180; XX DT 15-NOV-2012 (Rel. 114, Created) DT 15-NOV-2012 (Rel. 114, Last updated, Version 1) XX DE Cotton leaf curl Burewala virus complete genome, isolate C-28 XX KW complete genome. XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2759 RA Tahir M.; RT ; RL Submitted (05-NOV-2012) to the INSDC. RL Tahir M., ASAB, National University of Sciences & Technology, ASAB, RL National University of Sciences & Technology, Islamabad 44000, PAKISTAN. XX RN [2] RA Shuja M.N., Tahir M.; RT "Diversity of Cotton leaf curl Burewala virus in Pakistan"; RL Unpublished. XX DR MD5; c8af7700b1147a67afda23830a34cbd5. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Cotton leaf curl Burewala virus" FT /host="Gossypium hirsutum" FT /isolate="c-28" FT /mol_type="genomic DNA" FT /country="Pakistan:Faisalabad" FT /isolation_source="host leaves" FT /collected_by="Rob Briddon" FT /collection_date="14-Dec-2010" FT /identified_by="M. Tahir" FT /clone="GMT-14" FT /db_xref="taxon:620894" FT CDS 132..488 FT /gene="V2" FT /product="V2 protein" FT /function="movement" FT /db_xref="GOA:D3HIQ8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3HIQ8" FT /protein_id="CCO61978.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS complement(283..807) FT /gene="C5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:K8F893" FT /protein_id="CCO61979.1" FT /translation="MNILHSRRTGLIIKHIKYLSKILRFINRSTISNQEKHHTIRVILR FT LNVLIHPDLTQHINRLNTKSLTNSMGQPSTTSNITNPHYFTYMLNIMSGLKRLNLTWTF FT TSSRNIWTSVHPVHPGLSVHGPVRPCFCFGDADNGGSSTAHIWAVEVETAAYLRSGRGN FT DYICWSLRHNS" FT CDS 292..1062 FT /gene="CP" FT /product="coat protein" FT /function="encapsidation" FT /db_xref="GOA:K8ESS6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:K8ESS6" FT /protein_id="CCO61980.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMWVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1059..1463) FT /gene="REn" FT /product="replication enhancer protein" FT /function="replication enhancer" FT /db_xref="GOA:D3HIR1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D3HIR1" FT /protein_id="CCO61981.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT CDS complement(1505..2596) FT /gene="Rep" FT /product="replication associated protein" FT /function="replication" FT /db_xref="GOA:K8FE53" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K8FE53" FT /protein_id="CCO61982.1" FT /translation="MAAPKRFKVQAKNYFITYPQCSLTKQEALSQIQAINTPSNKKYIK FT LCKELHEDGSPHLHVLIQFEGKFVCTNHRFFDLVSPTGSAHFHPNIQGAKWSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNASLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDS FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYTEFLNEEKNTALKNWALKNAIFITLEGPL FT YSASNQSTAQGSEETQQEEESRY" FT CDS complement(1627..1815) FT /gene="TrAP" FT /product="transcription activator protein" FT /function="transactivator" FT /db_xref="UniProtKB/TrEMBL:K8ESY7" FT /protein_id="CCO61983.1" FT /translation="MTSTRISSNTLKSSWGPKETRSPTQNTESQFKLKAGYRQSSCAIL FT VRTAVIRNSSTRKKTQH" FT CDS complement(2137..2682) FT /gene="C4" FT /product="C4 protein" FT /function="symptoms determinant" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K8F898" FT /protein_id="CCO61984.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLNRKHFPKFKPSTHPRIKNTSNSAKSYTKMGALISMCSSSSRANSSAQITDS FT STWYPQPGQHISIRTFRELNGAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLT FT PQHLTQAVSQRLLESLRN" XX SQ Sequence 2759 BP; 718 A; 548 C; 649 G; 844 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcctattata agtacttcgt tgctaagttt 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgatacat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgggttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaaaacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttaaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagttatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacatataat aagaacaccc 1500 tcattcaata tctactctcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtacagt ggtccttcga gagtgatgaa gattgcattt tttaaggccc 1620 aattctttaa tgctgtgttt ttttcctcgt tgaggaattc cgtataactg ctgttcggac 1680 caggattgca caggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgcgagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca 1860 ggtctagatg tccgcacaaa tagttatgtg gtcccaatga tctagcccac atcgtcttcc 1920 ccgttcgact atctccctca attactatac tccgaggtct aaggggccgc gcagcggcat 1980 cgacaacgtt atcgatggcc caaacttcaa gttcttctgg aacttgatcg aaagaagaag 2040 gagaaaaagg agaaatatag ggagccggtg gctcctgaaa gattctgtct agacttgcat 2100 ttaaattatg aaattgtagt acaaaatctt taggagctag ttccttaatg actctaagag 2160 cctctgactt actgcctgcg ttaagtgctg cggcgtaagc gtcgttggct gtctgctgtc 2220 ctcctcttgc tgatcttcca tcgatctgaa actctcccca ctcgagagtg tccccgtcct 2280 tgtcgatgta ggccttgaca tctgagctcc atttagctcc ctgaatgttc ggatggaaat 2340 gtgctgaccc ggttggggat accaggtcga agaatctgtg atttgtgcag acgaatttgc 2400 cctcgaactg gatgagcaca tggagatgag ggctcccatc ttcgtgtaac tctttgcaga 2460 gtttgatgta ttttttattc gagggtgtgt tgatggcttg aatttgggaa agtgcttcct 2520 gtttagtgag tgagcactgt ggataagtga tgaaataatt tttggcttgt actttaaaac 2580 gtttgggggc agccattgac tttggtcaat tagagacaac tgatgggctt ttactctggg 2640 aattggagac tggatacaat ttatagtgtc tccaaatggc atattctgta aataactaga 2700 agttcgtttg aaattcaaat tcccctttgg gctccaaaag cggccatccg tataatatt 2759 //