ID HF536716; SV 1; circular; genomic DNA; STD; VRL; 2787 BP. XX AC HF536716; XX DT 07-JAN-2013 (Rel. 115, Created) DT 03-JAN-2016 (Rel. 127, Last updated, Version 2) XX DE Okra leaf curl Oman virus isolate OK-3, complete genome XX KW complete genome. XX OS Okra leaf curl Oman virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2787 RA Akhtar S.; RT ; RL Submitted (30-SEP-2012) to the INSDC. RL Akhtar S., Sultan Qaboos University, College of Agricultural and Marine RL Sciences, Plant Biotechnology Research Lab, P.O. Box-34, Al-Khod 123, OMAN. XX RN [2] RA Khan A.J., Akhtar S.; RT "Molecular characterization and infectivity studies of Okra leaf curl Oman RT virus"; RL Unpublished. XX DR MD5; 2ca50f97790b3e3e20ccebcf26c856f2. XX FH Key Location/Qualifiers FH FT source 1..2787 FT /organism="Okra leaf curl Oman virus" FT /host="Abelmoschus esculentus" FT /isolate="OK-3" FT /mol_type="genomic DNA" FT /country="Oman:Barka" FT /isolation_source="host leaves" FT /collected_by="Adil Al-Shihi" FT /collection_date="2012" FT /db_xref="taxon:1241370" FT CDS 165..533 FT /transl_table=1 FT /gene="V2" FT /product="Pre-coat protein" FT /db_xref="GOA:A0A0U5C230" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A0A0U5C230" FT /protein_id="CCM97104.1" FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVRESYDPCTLGYDLLSDL FT IGVVRRTNYVEATSRYHHFHSRLESASPSELRQPRVILCTCPHCPRHKQASGLEQQAPI FT QKTEDLSNLSQPRCPKGM" FT CDS 325..1101 FT /transl_table=1 FT /gene="V1" FT /product="Coat protein (CP)" FT /db_xref="GOA:A0A0U5CAG3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0A0U5CAG3" FT /protein_id="CCM97105.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPGLSSARAPTVLVTNKRRAW FT NNRPLYRKPRIYRIYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTKGVGLTH FT RTGKRFTIKSIYILGKVWMDDNIKKQNHTNNVMFFLVRDRRPYGNSPMDFGQVFHMFDN FT EPSTATVKNDLRDRFQVMRKFSATVTGGPSGMKEQVPVRRFFKLNSQTVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1098..1499) FT /transl_table=1 FT /gene="C3" FT /product="replication enhancer protein (REn)" FT /db_xref="GOA:A0A0U5CDK8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A0A0U5CDK8" FT /protein_id="CCM97106.1" FT /translation="MDSRTGELITAHQTENGVLIWTINNPLYFKTIKEIPLTHGNQTMV FT EMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKYLYRIGVISINNV FT IRAVNHVLYDVLQTTVASEFTHNIQIKLY" FT CDS complement(1243..1647) FT /transl_table=1 FT /gene="C2" FT /product="transcriptional activator protein (TrAP)" FT /db_xref="GOA:A0A0U5CHQ6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A0A0U5CHQ6" FT /protein_id="CCM97107.1" FT /translation="MRPSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAF FT TCRDNGFTHRGTHHCASDREWRTYLDNQQSPVFQNHKGDSSNARESNNGRDADKIQLQP FT QEGIGDSQMFHELQGLDDLTPSDWSFLKRI" FT CDS complement(1547..2635) FT /transl_table=1 FT /gene="C1" FT /product="replication initiation protein (Rep)" FT /db_xref="GOA:A0A0X1KUN2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUN2" FT /protein_id="CCM97108.1" FT /translation="MAAPNRFRINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDILDHGVSLVDGRSSRGGSLSPNDAYAEAINAGSKAQALNILKEKAPRDFLLQFH FT NLNCNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWAAENVVDAAARPSRPISIVIEGE FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEDKNSALKSWALKNATFITLSNPL FT YSGTNQSSASGGQEESNQETQD" FT CDS complement(2185..2478) FT /transl_table=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUK0" FT /protein_id="CCM97109.1" FT /translation="MGLLTCMFSSNSKGSSSARTIDSSTSPPQPGQHISIRTFRELKAQ FT AMSKPTWRKTETSLIMEFPWSMEDHLEEVLYLPTTHMPRQSTQGPKLRLSIY" XX SQ Sequence 2787 BP; 694 A; 595 C; 637 G; 861 T; 0 other; accggatggc cgcgcgattt tttttgtggt ccccgcccca cgtgaacacg tcgcgcgagt 60 tctgaagatg tcgcgcgatg ctgtccaatc agaacgcgcg ctctacgcat tataatttga 120 aatttgaaat ataaacttgc tcccctaagt tgtccggcat aactatgtgg gatccgttat 180 tgaacgactt ccctgaatcc gttcacggtt tccgttgtat gctcgccgtg aaatatttgc 240 aggctgttcg agagtcgtac gatccttgca ctcttgggta cgatcttctt agcgatctta 300 tcggagttgt tcgccgtacc aactatgtcg aagcgaccag cagatatcat catttccact 360 cccgcctcga aagtgcgtcg ccgtctgaac ttcgacagcc ccgggttatc ctctgcacgt 420 gcccccactg tcctcgtcac aaacaagcgt cgggcctgga acaacaggcc cctatacaga 480 aaaccgagga tttatcgaat ttatcgcagc ccagatgtcc caaagggatg tgaaggtcct 540 tgtaaggtcc agtcttatga acagcgtgat gatgtcaagc atacgggcat tgttcgatgt 600 gtgtcggatg ttactaaggg tgttggtctt actcatcgta ctggaaagcg tttcactatc 660 aaatctatct atattcttgg taaggtatgg atggatgaca acattaagaa gcagaatcac 720 accaacaatg taatgttttt ccttgtccgt gatagaagac cctatggcaa tagtcccatg 780 gattttggac aggtttttca catgtttgac aacgaaccta gcactgccac tgtaaagaat 840 gatttgcgag atcgttttca ggtgatgcgt aagtttagtg ctactgtaac tggtggccct 900 tctgggatga aggaacaagt tcctgttcgt aggtttttta agcttaatag tcagactgtg 960 tataaccatc aagaagctgc gaagtatgag aatcatactg agaatgcttt gttgttgtat 1020 atggcatgta ctcatgcctc aaaccctgtg tatgctacgt taaagatacg gatctatttc 1080 tacgattcgg tatctaatta atataatttt atttgaatat tgtgcgtgaa ttcacttgcc 1140 acggttgttt gcaatacatc gtacaaaaca tgattgactg ccctaattac attgttaatt 1200 gaaattacgc ctattctata caaatatttc ataatctgct tcctaaatac gtttaagaaa 1260 agaccagtcg gagggcgtga gatcgtccag accctgaagt tcatgaaaca tttgtgaatc 1320 cccaattcct tcctgaggtt gtagttgaat cttatctgca tctctaccat tgtttgattc 1380 ccgtgcgtta gaggaatctc ctttatggtt ttgaaataca ggggattgtt gattgtccag 1440 ataagtacgc cattctctgt ctgatgcgca gtgatgagtt cccctgtgcg tgaatccatt 1500 gtctctgcac gtgaaggcta cgtatactgt gcaaccacaa gggatgtcaa tcctgcgtct 1560 cctgattgct ctcttcttgg cctcccgatg ctgaactttg attggtacct gagtacagcg 1620 gatttgagag ggtgatgaag gtcgcattct ttaatgccca ggattttaat gctgagttct 1680 tgtcctcgtc taagaactct ttatagcttg cattgggccc tggattgcag aggaagattg 1740 ttgggatgcc ccctttaatt tgaactggtt tcccgtattt tgtgttggat tgccagtccc 1800 tttgggcccc catgaactct ttaaagtgct tgaggaagtg cggatcgacg tcatcaatga 1860 tgttatacca agcgtcgtta ctgtacacct ttggacttag atctaaatgc ccacatagat 1920 aattatgtgg gcctagtgac ctagcccata cggtctttcc tgttctgctt tccccttcaa 1980 tcactatact aatcggtcta cttggccgcg cagcggcatc gacgacgttc tcggccgccc 2040 actcttcaag ttcttctgga acttgatcga acgaagaaga agaaaaagga gaaacataag 2100 gagctggtgg ctcctgaaaa tacctatcta aattacaatt taaattatga aattggagta 2160 gaaagtctct tggggctttc tccttcagta tattgagagc ctgagctttg gaccctgcgt 2220 tgattgcctc ggcatatgcg tcgttgggag atagagaacc tcctctagat gatcttccat 2280 cgaccaggga aactccatga tcaaggatgt ctccgtcttt ctccatgtag gttttgacat 2340 cgcttgagct tttagctccc tgaatgttcg gatggaaatg tgctgacctg gttggggagg 2400 tgaggtcgaa gaatctattg ttcttgcact ggaacttccc ttcgaattgg atgagaacat 2460 gcaagtgagg agtcccatct tcgtgaagct ctctgcagat tctaatgaat tttttggaag 2520 tgggtgtttg gagatttaat aattgggaaa gtgcttcctc tttagtaaga gagcacttgg 2580 gataagtgag aaaataattt ttggcattta ttctaaaccg attgggggct gccatgctga 2640 cttagtcaat cggtgtctct caatttgctc tatgtattgg tgtactggag tcctatatat 2700 atggagactc taatggcata attgtaataa aagaacttta atttgaattt caaatgaaaa 2760 gcctaaagcg gccatccgtc taatatt 2787 //