ID HE985227; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC HE985227; XX DT 19-SEP-2012 (Rel. 114, Created) DT 19-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Cotton leaf curl Burewala virus, isolate GMT02, complete genome XX KW complete genome. XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2759 RA Tahir M.; RT ; RL Submitted (10-SEP-2012) to the INSDC. RL Tahir M., Technology, Atta-ur-Rahman School of Applied Biosciences, RL National University of Sciences & Technology, 44000, PAKISTAN. XX RN [2] RA Fareed I., Tahir M.; RT "First report of Cotton leaf curl Burewala virus infecting Ricinus RT communis"; RL Unpublished. XX DR MD5; 6755ed07777c94c0e0a1ccdee56601a4. DR EuropePMC; PMC5727119; 29234082. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Cotton leaf curl Burewala virus" FT /host="Ricinus communis" FT /isolate="GMT02" FT /mol_type="genomic DNA" FT /country="Pakistan:Okara" FT /isolation_source="host leaves" FT /collected_by="Irfan Fareed" FT /collection_date="03-Jan-2012" FT /clone="GMT02" FT /db_xref="taxon:620894" FT CDS 132..488 FT /gene="V2" FT /product="precoat" FT /db_xref="GOA:K0P7G1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:K0P7G1" FT /protein_id="CCM43967.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLGGKIYFLESLGSDLIRDL FT IPVIRARNYVEATSRYNHFHAGLEGTPSFQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS 292..1062 FT /gene="CP" FT /product="coat protein" FT /function="encapsidation" FT /db_xref="GOA:K0P2W0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:K0P2W0" FT /protein_id="CCM43968.1" FT /translation="MWKRPADIIISTPVWKVRRRFNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIKVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1059..1463) FT /gene="REn" FT /product="replication enhancer protein" FT /function="enhances replication" FT /db_xref="GOA:K0PBF9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K0PBF9" FT /protein_id="CCM43969.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIRFNIY" FT CDS complement(1505..2596) FT /gene="Rep" FT /product="replication association protein" FT /function="replication" FT /db_xref="GOA:K0P789" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K0P789" FT /protein_id="CCM43970.1" FT /translation="MAPPKRFKIQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYTEFLNEEKNTALKNWALKNAIFITLEGPL FT YSASNQSTAQGSEETQQEEESRS" FT CDS complement(1627..1815) FT /gene="TrAP" FT /product="transcription activator protein" FT /function="transactivation" FT /db_xref="UniProtKB/TrEMBL:K0P0J1" FT /protein_id="CCM43971.1" FT /translation="MTSTRISSNTLKSSWGPKETGSPTQNTESQFKLKAGYRQSSCAIL FT VQTAVIRNSSMRKKTQH" FT CDS complement(2242..2682) FT /gene="C4" FT /product="C4 protein" FT /function="symptoms determinant" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H9MZI0" FT /protein_id="CCM43972.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSARITDS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFR" XX SQ Sequence 2759 BP; 716 A; 536 C; 652 G; 855 T; 0 other; accggatggc cgcgcgattt tttcgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcttattata agtacttcgt tgctaagttt 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcagt taggaggaaa aatttatttt cttgaatcat 240 tgggttcgga tttgataagg gatttaatcc cggtaataag ggctaggaat tatgtggaag 300 cgaccagcag atataatcat ttccacgccg gtttggaagg tacgccgtcg tttcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 aaagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatttactt ctatgattcc gtgacaaatt aataaatatt gaatcttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagatact aagaacaccc 1500 tcattcaaga tctactctcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtacagt ggtccttcga gagtgatgaa tattgcattt tttaaggccc 1620 aattctttaa tgctgtgttt ttttcctcat tgaggaattc cgtataactg ctgtttggac 1680 caggattgca caggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca 1860 ggtccagatg tccgcacaaa tagttatgtg gtcccaatga tctagcccac atcgtcttcc 1920 ccgttcgact atctccctca attactatac tccgaggtct aaggggccgc gcagcggcat 1980 cgacaacgtt atcgatggcc caaacttcaa gttcttctgg aacttgatcg aaagaagaag 2040 gagaaaaagg agaaatatag ggagccggtg gctcctgaaa gattctgtct agatttgcat 2100 ttaaattatg aaattgtagt acaaaatctt taggagctag ttctttaatg actctaagag 2160 cctctgactt actgcctgcg ttaagtgctg cggcgtaagc gtcgttggct gtctgctgtc 2220 ctcctcttgc tgatcttcca tctatctgaa actctcccca ctcgagagtg tccccgtcct 2280 tgtcgatgta ggccttgaca tctgagcttg atttagctcc ctgaatgttc ggatggaaat 2340 gtgctgacct ggttggggat accaggtcga agaatctgtt attcgtgcag acgaatttgc 2400 cctcgaactg gatgagcaca tggagatgag ggctcccatc ttcgtgtaac tctctgcaga 2460 gtttgatgta ttttttattc gagggtgtgt tgatggcttg aatttgggaa agtgcttcct 2520 ctttagtgag tgagcactgt ggataagtga tgaaataatt tttggcttgt attttaaaac 2580 gtttgggggg agccattgac tttggtcaat tagagacaac tgatgggctt ttactctggg 2640 aattggagac tggatacaat ttatagtgtc tccaaatggc atattctgta aataactaga 2700 agtttgtttg aaattcaaat tcccctttgg gctccaaaag cggccatccg tataatatt 2759 //