ID   HE971588; SV 1; linear; genomic RNA; STD; VRL; 517 BP.
XX
AC   HE971588;
XX
DT   25-NOV-2012 (Rel. 114, Created)
DT   25-NOV-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Cucumber mosaic virus partial ORF2a gene and ORF2b gene, segment RNA2,
DE   genomic RNA, isolate AOU1.5/06
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-517
RA   Jacquemond M.;
RT   ;
RL   Submitted (26-JUL-2012) to the INSDC.
RL   INRA, Station de Pathologie Vegetale, Domaine Saint Maurice, BP 9484143
RL   Montfavet Cedex, FRANCE.
XX
RN   [2]
RA   Ben Tamarzizt H., Montarry J., Girardot G., Fakhfakh H., Tepfer M.,
RA   Jacquemond M.;
RT   "Cucumber mosaic virus (CMV) populations in Tunisian pepper crops are
RT   mainly composed of virus reassortants with resistance-breaking properties";
RL   Unpublished.
XX
DR   MD5; 1404bf3ac94241e5b468eebdb8dda919.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..517
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA2"
FT                   /host="Capsicum annuum"
FT                   /isolate="AOU1.5/06"
FT                   /mol_type="genomic RNA"
FT                   /country="Tunisia"
FT                   /db_xref="taxon:12305"
FT   CDS             <1..342
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="ORF2a"
FT                   /product="RNA-dependent RNA polymerase, RdRp"
FT                   /db_xref="GOA:K8DV57"
FT                   /db_xref="UniProtKB/TrEMBL:K8DV57"
FT                   /protein_id="CCK33406.1"
FT                   /translation="AFKKYTANFNAYKELCYSDRHQCDLVNTFCVSEFRVIRRATVKKK
FT                   KNGSVDSSGVDRRPPPSPFAGGETSKTKVSRQKPASEGLQKSQRESAIYSETFPGVTIP
FT                   RSRSRGLVS"
FT   CDS             140..442
FT                   /transl_table=1
FT                   /gene="ORF2b"
FT                   /product="RNA silencing suppressor"
FT                   /db_xref="InterPro:IPR004946"
FT                   /db_xref="UniProtKB/TrEMBL:K8DRK9"
FT                   /protein_id="CCK33407.1"
FT                   /translation="MEVLTVVVSTADLHLAHLQEVKRRRRRSHVRNRRARGYKSPSERA
FT                   RSIARLFQVLPFHGVDPVDWFPDIVRSPSVTSLVSYKSFDDTDWFAGNEWAEGSF"
XX
SQ   Sequence 517 BP; 118 A; 117 C; 134 G; 148 T; 0 other;
     gcgtttaaga agtacaccgc taattttaac gcctataagg agctttgtta ctctgaccgt        60
     catcaatgtg acttggtcaa tacgttttgt gtatccgagt tccgggtgat tcgtcgcgct       120
     accgttaaga agaagaagaa tggaagtgtt gacagtagtg gtgtcgaccg ccgacctcca       180
     cctagcccat ttgcaggagg tgaaacgtcg aagacgaagg tctcacgtca gaaaccggcg       240
     agcgaggggt tacaaaagtc ccagcgagag agcgcgatct atagcgagac ttttccaggt       300
     gttaccattc cacggagtag atcccgtgga ttggtttcct gatatcgttc gctctccgtc       360
     cgttaccagc cttgtttctt acaaatcttt tgatgatact gattggtttg ctggtaacga       420
     atgggccgaa gggtcgtttt gatttccgac ccttcgtcgt ccgaagacgt taaactacac       480
     tctctttatt gcgagtgctg agttggtagt ttgctct                                517
//