ID   HE971515; SV 1; linear; genomic RNA; STD; VRL; 536 BP.
XX
AC   HE971515;
XX
DT   25-NOV-2012 (Rel. 114, Created)
DT   25-NOV-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Cucumber mosaic virus partial ORF2a gene and ORF2b gene, segment RNA2,
DE   genomic RNA, isolate S5/09
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-536
RA   Jacquemond M.;
RT   ;
RL   Submitted (26-JUL-2012) to the INSDC.
RL   INRA, Station de Pathologie Vegetale, Domaine Saint Maurice, BP 9484143
RL   Montfavet Cedex, FRANCE.
XX
RN   [2]
RA   Ben Tamarzizt H., Montarry J., Girardot G., Fakhfakh H., Tepfer M.,
RA   Jacquemond M.;
RT   "Cucumber mosaic virus (CMV) populations in Tunisian pepper crops are
RT   mainly composed of virus reassortants with resistance-breaking properties";
RL   Unpublished.
XX
DR   MD5; 1085a8057b0cf9762cf61293fd5df819.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..536
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA2"
FT                   /host="Capsicum annuum"
FT                   /isolate="S5/09"
FT                   /mol_type="genomic RNA"
FT                   /country="Tunisia"
FT                   /db_xref="taxon:12305"
FT   CDS             <1..384
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="ORF2a"
FT                   /product="RNA-dependent RNA polymerase, RdRp"
FT                   /db_xref="GOA:K8DS03"
FT                   /db_xref="UniProtKB/TrEMBL:K8DS03"
FT                   /protein_id="CCK33260.1"
FT                   /translation="AFKKYTANFQSYKELYYSDRRQCELINSFCSTEFRVERVNSNKQR
FT                   KKYGIERRCNDKRRTPTGSYGGGEEAETKVSQTESTGTRSQKSQRESAFKSQTIPLLTV
FT                   LPSRWFGTNRVMPPYDRGGVTRV"
FT   CDS             143..475
FT                   /transl_table=1
FT                   /gene="ORF2b"
FT                   /product="RNA silencing suppressor"
FT                   /db_xref="InterPro:IPR004946"
FT                   /db_xref="UniProtKB/TrEMBL:K8DSG0"
FT                   /protein_id="CCK33261.1"
FT                   /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA
FT                   RSNLRLFRFLPFYQVDGSELTGSCRHMIVAELPESEASRLELSAEDHDFDDTDWFAGNE
FT                   WAEGAF"
XX
SQ   Sequence 536 BP; 144 A; 122 C; 140 G; 130 T; 0 other;
     gcctttaaga agtacaccgc taatttccag tcctacaaag aactctatta ttcagatcgt        60
     cgtcagtgcg aattgatcaa ttcgttttgt agtacagagt tcagggttga gcgtgtaaat       120
     tccaacaaac agcgaaagaa atatggaatt gaacgtaggt gcaatgacaa acgtcgaact       180
     ccaactggct cgtatggtgg aggcgaagaa gcagagacga aggtctcaca aacagaatcg       240
     acgggaacga ggtcacaaaa gtcccagcga gagagcgcgt tcaaatctca gactattccg       300
     cttcttaccg ttctaccaag tagatggttc ggaactaaca gggtcatgcc gccatatgat       360
     cgtggcggag ttacccgagt ctgaggcctc tcgtttagag ttatcggcgg aagaccacga       420
     ttttgacgat acagattggt tcgccggtaa cgaatgggcg gaaggtgctt tctgaaacct       480
     ccccttcctc tccctccggc tttctgtggc gggagctgag ttggcagtgt tgctat           536
//