Dbfetch

Dbfetch

ID   HE967552; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967552;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper golden mosaic virus cp gene for coat protein, isolate PGBER23W2010
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
DR   MD5; d4113929918be32f6e5cc61a218231ac.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..756
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PGBER23W2010"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Queretaro, Bernal"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:223301"
FT   CDS             1..756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A7IZR7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:A7IZR7"
FT                   /protein_id="CCJ67873.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTYRSPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRFQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 756 BP; 200 A; 167 C; 201 G; 188 T; 0 other;
     atggttaagc gggatgcccc atggcgttta atggcgggga cctctaaggt ttcccgctct        60
     gccaattatt cacgtggcac gggtatgggc cctaaattcg ataaggccgc tgcttgggtt       120
     aacaggccca tgtacaggaa gcccaggata tatcgtacgt atagaagccc agatgtgcct       180
     agaggatgtg aagggccatg taaggtccag tccttcgagc agcggcatga tatctcgcat       240
     gttggcaagg tcatgtgcat ttcggacgtg acacgtggta atggtattac tcatcgtgta       300
     ggcaagcgtt tctgcgtcaa gtctgcatac gttctgggta agatatggat ggacgagaat       360
     atcaagctca agaaccacac caacagcgtc atgttctggc tcgtgagaga taggagacca       420
     tatggtaccc ctatggactt tggtcaggtg ttcaacatgt atgacaacga gcccagtaca       480
     gctactgtga agaacgatct gcgtgatcgt ttccaagtca tgcacaggtt ctcggctaag       540
     gtcacaggtg gacagtatgc cagcaacgag caggcattgg ttaggcgttt ctggaaggtg       600
     aacaactacg tcgtgtacaa ccatcaggaa gctggcaaat acgagaacca tactgagaac       660
     gccctgctat tgtatatggc atgtactcat gcctctaacc ctgtgtacgc gacattgaaa       720
     attcgaatct atttttatga ttcgataaca aattaa                                 756
//