ID   HE962480; SV 1; linear; genomic RNA; STD; VRL; 2218 BP.
XX
AC   HE962480;
XX
DT   06-SEP-2012 (Rel. 114, Created)
DT   06-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Cucumber mosaic virus RNA3 complete segment, genomic RNA, strain Vir
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2218
RA   Jacquemond M.;
RT   ;
RL   Submitted (06-JUL-2012) to the INSDC.
RL   INRA, Station de Pathologie Vegetale, Domaine Saint Maurice, BP 9484143
RL   Montfavet Cedex, FRANCE.
XX
RN   [2]
RA   Jacquemond J.M.;
RT   "Sequence of infectious cDNA clones of RNAs1, 2 and 3 of CMV strain Vir";
RL   Unpublished.
XX
DR   MD5; d042856ba8a11203bf978fb87cb96936.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2218
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum sp."
FT                   /strain="Vir"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy:North Italy"
FT                   /db_xref="taxon:12305"
FT   CDS             122..961
FT                   /transl_table=1
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:J7QJV2"
FT                   /protein_id="CCJ09633.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTEAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYVLTDSKINQNARSESEDLNVESPPIAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1261..1917
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /function="Cucumber mosaic virus RNA encapsidation"
FT                   /db_xref="GOA:J7QAX8"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:J7QAX8"
FT                   /protein_id="CCJ09634.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAFSSADATFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRLGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2218 BP; 509 A; 520 C; 533 G; 656 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtgtcg cgtcgtgtcg agtcgtgttg        60
     tccgcacatt tgagtcgtgc tgtccgcaca tttttctttc agtgtgttag attcccgagg       120
     catggctttc caaggtacca gtaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgatcttcag aagatattat ttagccctga agccattaag aaaatggcta ctgagtgtga       240
     cctaggccgg catcattgga tgcgcgctga taacgcaatt tcagtccggc ccctcgttcc       300
     cgaagtaacc catggtcgta ttgcttcctt ctttaagtct ggatatgatg tcggtgaatt       360
     gtgctctaaa ggatatatga gcgtccctca agtgttgtgc gctgttactc gaactgtttc       420
     tacagaagct gagggatcct tgagaattta cctggctgat ctaggcgata aggagttatc       480
     tcctatagat ggacaatgcg tatcattaca taaccatgat cttcccgctt tagtgtcttt       540
     ccaaccgacg tatgattgtc ctatggagac tgttgggaat cgtaagcggt gtttcgctgt       600
     tgttatcgaa agacatggtt acattgggta taccggcacc acagcaagcg tgtgtagtaa       660
     ttggcaagca cggttctcat ctaagaacaa taactacact catatcgctg ctgggaagac       720
     tctagtactg ccattcaaca gattagctga gcaaacgaaa ccgtcagccg tcgctcgcct       780
     gttgaagtcg caattgaata acatagaatc ttcgcaatac gttttaacgg attcgaagat       840
     taatcaaaat gcgcgcagtg agtccgagga tttgaatgtt gagagccctc ccatcgcaat       900
     cgggagttct tccgcgtccc gctccgaagc cttcagaccg caggtggtta acggtcttta       960
     gcttttcgtt gcgtattaga ttataagtat ttgtgagtct gtacataata ctatatctat      1020
     agtgtcctgt gtgagttgat acagtagaca actgtgacgc gatgtcgtgt tgagaagaga      1080
     gcacatctgg tttagtaaat ccacatctta actttgaggt tcaattcctc ttgttccctg      1140
     atgggttcct ttacttttca tggatgcttc tccacgagat tgcgtttcgt ctacttatcg      1200
     taagagtata ttgtgctgtg attttctctt tcgtgttgta gatttgagtc gagtcgagtc      1260
     atggacaaat ctgaatcaac cagtgccggt cgtaaccgtc gacgtcgtcc gcgtcgcggt      1320
     tcccgctccg ctttctcctc cgcggatgct acatttagag tcctgtcgca acagctttcg      1380
     cgacttaata agacgttagc agctggtcgt cctactatta accacccaac ctttgtaggg      1440
     agtgagcgtt gtagacttgg ctacacattc acatcgatta ccctaaagcc accaaaaata      1500
     gaccgcgggt cttattatgg taaaaggttg ttacttcctg attcagtcac tgagttcgat      1560
     aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctacc      1620
     gtgtgggtga cggtccgtaa agttcctgcc tcctcggacc tatccgttgc cgccatctct      1680
     gctatgtttg cggacggagc ctcaccggta ctggtttatc agtacgccgc atccggagtt      1740
     caagctaaca acaaattgtt gtatgatctt tcggcgatgc gcgctgatat tggtgacatg      1800
     agaaagtacg ccgtgctcgt gtattcaaaa gacgatgcgc ttgagacgga tgagctagta      1860
     ctccatgtcg acattgagca ccaacgtatt cccacatctg gagtgctccc agtttgaact      1920
     cgtgttttcc aagaccctcc ctccgatttc tgtggcggga gctgagttgg tagtgttgct      1980
     acaaactacc tgaagtcact aaacgctctg cggtgaacgg gttgtccatc cagcttacgg      2040
     ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc tgaggtgcct      2100
     ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc cagcacaaga      2160
     tgctggtttt agggtacggg cgccccccac ttttagtggg gtctctcaaa ggagacca        2218
//